RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 XCL1P47992 114 aa9.56□□□□□ -0.88
HOXC4-202ENST00000430889 MRPL23Q16540 153 aaKnown RBP9.56□□□□□ -0.88
HOXC4-202ENST00000430889 Q8IZM0 81 aa9.56□□□□□ -0.88
HOXC4-202ENST00000430889 Q8N3U1 123 aa9.56□□□□□ -0.88
HOXC4-202ENST00000430889 COX6CP09669 75 aa9.55□□□□□ -0.88
HOXC4-202ENST00000430889 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
HOXC4-202ENST00000430889 LELP1Q5T871 98 aa9.55□□□□□ -0.88
HOXC4-202ENST00000430889 CLPSL2Q6UWE3 100 aa9.55□□□□□ -0.88
HOXC4-202ENST00000430889 CD164L2Q6UWJ8 174 aa9.55□□□□□ -0.88
HOXC4-202ENST00000430889 CLEC2BQ92478 149 aa9.55□□□□□ -0.88
HOXC4-202ENST00000430889 IGKV2-28A0A075B6P5 120 aa9.54□□□□□ -0.88
HOXC4-202ENST00000430889 IGKV2D-28P01615 120 aa9.54□□□□□ -0.88
HOXC4-202ENST00000430889 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
HOXC4-202ENST00000430889 GAGE12HA6NDE8 117 aa9.53□□□□□ -0.88
HOXC4-202ENST00000430889 COX7A2LO14548 114 aa9.53□□□□□ -0.88
HOXC4-202ENST00000430889 CCL18P55774 89 aa9.53□□□□□ -0.88
HOXC4-202ENST00000430889 REG3AQ06141 175 aa9.52□□□□□ -0.89
HOXC4-202ENST00000430889 CHCHD10Q8WYQ3 142 aaPredicted RBP9.52□□□□□ -0.89
HOXC4-202ENST00000430889 FBN1P35555 2871 aaKnown RBP9.52□□□□□ -0.89
HOXC4-202ENST00000430889 H3BT86 120 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 LINC00158P58513 81 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 LINC00337Q8N6G1 96 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 CDIP1Q9H305 208 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 ANK2Q01484 3957 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 TRAV13-2A0A0B4J235 113 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 ANGP03950 147 aaKnown RBP9.51□□□□□ -0.89
HOXC4-202ENST00000430889 HTN3P15516 51 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 C6orf226Q5I0X4 101 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 SND1-IT1Q9HBX3 110 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 RETNQ9HD89 108 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 PRR34Q9NV39 138 aa9.51□□□□□ -0.89
HOXC4-202ENST00000430889 H3BNG1 76 aa9.5□□□□□ -0.89
HOXC4-202ENST00000430889 C11orf68Q9H3H3 251 aaKnown RBP9.5□□□□□ -0.89
HOXC4-202ENST00000430889 RPL28P46779 137 aaKnown RBP9.49□□□□□ -0.89
HOXC4-202ENST00000430889 LYPD5Q6UWN5 251 aa9.48□□□□□ -0.89
HOXC4-202ENST00000430889 C2orf82Q6UX34 121 aa9.48□□□□□ -0.89
HOXC4-202ENST00000430889 NTN5Q8WTR8 489 aaPredicted RBP9.48□□□□□ -0.89
HOXC4-202ENST00000430889 CRPP02741 224 aa9.48□□□□□ -0.89
HOXC4-202ENST00000430889 PFN2P35080 140 aa9.48□□□□□ -0.89
HOXC4-202ENST00000430889 CXCL5P42830 114 aa9.48□□□□□ -0.89
HOXC4-202ENST00000430889 C21orf62-AS1Q17RA5 79 aa9.47□□□□□ -0.89
HOXC4-202ENST00000430889 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
HOXC4-202ENST00000430889 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.89
HOXC4-202ENST00000430889 TRACP01848 142 aa9.46□□□□□ -0.89
HOXC4-202ENST00000430889 C3orf56Q8N813 242 aa9.46□□□□□ -0.89
HOXC4-202ENST00000430889 DEFB121Q5J5C9 76 aa9.45□□□□□ -0.9
HOXC4-202ENST00000430889 ENHOQ6UWT2 76 aa9.45□□□□□ -0.9
HOXC4-202ENST00000430889 FAM218AQ96MZ4 157 aa9.45□□□□□ -0.9
HOXC4-202ENST00000430889 KLK5Q9Y337 293 aaPredicted RBP9.45□□□□□ -0.9
HOXC4-202ENST00000430889 TEX49A0A1B0GTD5 131 aa9.45□□□□□ -0.9
HOXC4-202ENST00000430889 COX17Q14061 63 aa9.45□□□□□ -0.9
HOXC4-202ENST00000430889 Q6ZTC4 211 aa9.44□□□□□ -0.9
HOXC4-202ENST00000430889 SMIM11BQ8TCY0 68 aa9.44□□□□□ -0.9
HOXC4-202ENST00000430889 UBE2WQ96B02 151 aa9.44□□□□□ -0.9
HOXC4-202ENST00000430889 PKD1L1Q8TDX9 2849 aa9.44□□□□□ -0.9
HOXC4-202ENST00000430889 CKS1BP61024 79 aa9.43□□□□□ -0.9
HOXC4-202ENST00000430889 KPRPQ5T749 579 aaPredicted RBP9.43□□□□□ -0.9
HOXC4-202ENST00000430889 SCGB1A1P11684 91 aa9.42□□□□□ -0.9
HOXC4-202ENST00000430889 CFAP161Q6P656 301 aa9.42□□□□□ -0.9
HOXC4-202ENST00000430889 KLK12Q9UKR0 248 aa9.42□□□□□ -0.9
HOXC4-202ENST00000430889 C22orf24Q9Y442 160 aa9.42□□□□□ -0.9
HOXC4-202ENST00000430889 MALP21145 153 aa9.42□□□□□ -0.9
HOXC4-202ENST00000430889 STAB1Q9NY15 2570 aa9.42□□□□□ -0.9
HOXC4-202ENST00000430889 NDUFC2O95298 119 aa9.41□□□□□ -0.9
HOXC4-202ENST00000430889 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.9
HOXC4-202ENST00000430889 KRTAP26-1Q6PEX3 210 aa9.4□□□□□ -0.9
HOXC4-202ENST00000430889 TENM3Q9P273 2699 aa9.4□□□□□ -0.91
HOXC4-202ENST00000430889 A0A0J9YWU9 116 aa9.39□□□□□ -0.91
HOXC4-202ENST00000430889 XGP55808 180 aa9.39□□□□□ -0.91
HOXC4-202ENST00000430889 NANOS2P60321 138 aaKnown RBP9.39□□□□□ -0.91
HOXC4-202ENST00000430889 SPAG11BQ08648 103 aa9.39□□□□□ -0.91
HOXC4-202ENST00000430889 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
HOXC4-202ENST00000430889 WFDC10BQ8IUB3 73 aa9.39□□□□□ -0.91
HOXC4-202ENST00000430889 C9orf116Q5BN46 136 aaPredicted RBP9.39□□□□□ -0.91
HOXC4-202ENST00000430889 MUC7Q8TAX7 377 aa9.39□□□□□ -0.91
HOXC4-202ENST00000430889 C6orf223Q8N319 242 aa9.38□□□□□ -0.91
HOXC4-202ENST00000430889 Q8NDZ9 215 aa9.38□□□□□ -0.91
HOXC4-202ENST00000430889 GVQW2A0A096LPI5 108 aaPredicted RBP9.37□□□□□ -0.91
HOXC4-202ENST00000430889 H0YGX0 51 aa9.37□□□□□ -0.91
HOXC4-202ENST00000430889 MT-ATP8P03928 68 aa9.37□□□□□ -0.91
HOXC4-202ENST00000430889 UNQ6190/PRO20217Q6UXQ8 127 aa9.37□□□□□ -0.91
HOXC4-202ENST00000430889 ESRGQ1W209 222 aa9.36□□□□□ -0.91
HOXC4-202ENST00000430889 A0A087WYN8 130 aa9.36□□□□□ -0.91
HOXC4-202ENST00000430889 FAM240AA0A1B0GVK7 77 aa9.36□□□□□ -0.91
HOXC4-202ENST00000430889 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
HOXC4-202ENST00000430889 DEFB131BA0A096LNP1 70 aa9.34□□□□□ -0.91
HOXC4-202ENST00000430889 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.91
HOXC4-202ENST00000430889 OR13C6PQ8NH95 151 aa9.33□□□□□ -0.92
HOXC4-202ENST00000430889 C11orf45Q8TAV5 145 aa9.33□□□□□ -0.92
HOXC4-202ENST00000430889 LINC00526Q96FQ7 95 aa9.33□□□□□ -0.92
HOXC4-202ENST00000430889 HUWE1Q7Z6Z7 4374 aaKnown RBP9.33□□□□□ -0.92
HOXC4-202ENST00000430889 LINC01556Q5JQF7 62 aa9.32□□□□□ -0.92
HOXC4-202ENST00000430889 Q9HAA7 133 aa9.32□□□□□ -0.92
HOXC4-202ENST00000430889 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
HOXC4-202ENST00000430889 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
HOXC4-202ENST00000430889 TM2D3Q9BRN9 247 aa9.32□□□□□ -0.92
HOXC4-202ENST00000430889 TMEM126AQ9H061 195 aa9.31□□□□□ -0.92
HOXC4-202ENST00000430889 KRTAP21-3Q3LHN1 58 aa9.3□□□□□ -0.92
HOXC4-202ENST00000430889 C15orf56Q8N910 161 aa9.29□□□□□ -0.92
HOXC4-202ENST00000430889 OBSCN-AS1Q96MR7 158 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms