RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 IGHV3OR16-9A0A0B4J2B5 98 aa10.54□□□□□ -0.72
LINC00839-202ENST00000429940 TENM1Q9UKZ4 2725 aa10.53□□□□□ -0.72
LINC00839-202ENST00000429940 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
LINC00839-202ENST00000429940 C2CD3Q4AC94 2353 aa10.53□□□□□ -0.72
LINC00839-202ENST00000429940 IBA57-AS1B1ANH7 110 aa10.53□□□□□ -0.72
LINC00839-202ENST00000429940 PFN2P35080 140 aa10.53□□□□□ -0.72
LINC00839-202ENST00000429940 C3orf56Q8N813 242 aa10.53□□□□□ -0.72
LINC00839-202ENST00000429940 CXCL5P42830 114 aa10.52□□□□□ -0.73
LINC00839-202ENST00000429940 SMIM20Q8N5G0 67 aa10.52□□□□□ -0.73
LINC00839-202ENST00000429940 A0A087WZ39 114 aa10.51□□□□□ -0.73
LINC00839-202ENST00000429940 H0YGX0 51 aa10.51□□□□□ -0.73
LINC00839-202ENST00000429940 C5orf38Q86SI9 138 aa10.51□□□□□ -0.73
LINC00839-202ENST00000429940 FHL2Q14192 279 aa10.51□□□□□ -0.73
LINC00839-202ENST00000429940 WNK1Q9H4A3 2382 aa10.51□□□□□ -0.73
LINC00839-202ENST00000429940 PAX4O43316 350 aa10.5□□□□□ -0.73
LINC00839-202ENST00000429940 ATP5G1P05496 136 aa10.5□□□□□ -0.73
LINC00839-202ENST00000429940 CSNK1G2-AS1Q8NCQ2 148 aa10.5□□□□□ -0.73
LINC00839-202ENST00000429940 TMEM126AQ9H061 195 aa10.5□□□□□ -0.73
LINC00839-202ENST00000429940 C9orf129Q5T035 196 aaKnown RBP10.49□□□□□ -0.73
LINC00839-202ENST00000429940 C14orf132Q9NPU4 83 aa10.49□□□□□ -0.73
LINC00839-202ENST00000429940 LECT2O14960 151 aa10.49□□□□□ -0.73
LINC00839-202ENST00000429940 FAM110AQ9BQ89 295 aa10.49□□□□□ -0.73
LINC00839-202ENST00000429940 HILS1P60008 231 aa10.48□□□□□ -0.73
LINC00839-202ENST00000429940 C3orf22Q8N5N4 141 aa10.48□□□□□ -0.73
LINC00839-202ENST00000429940 OR13C6PQ8NH95 151 aa10.48□□□□□ -0.73
LINC00839-202ENST00000429940 C11orf68Q9H3H3 251 aaKnown RBP10.48□□□□□ -0.73
LINC00839-202ENST00000429940 C19orf73Q9NVV2 129 aa10.48□□□□□ -0.73
LINC00839-202ENST00000429940 ATRQ13535 2644 aa10.47□□□□□ -0.73
LINC00839-202ENST00000429940 LINC00959A0A1B0GUT2 108 aa10.47□□□□□ -0.73
LINC00839-202ENST00000429940 C9orf153Q5TBE3 101 aa10.47□□□□□ -0.73
LINC00839-202ENST00000429940 C6orf226Q5I0X4 101 aa10.47□□□□□ -0.73
LINC00839-202ENST00000429940 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.73
LINC00839-202ENST00000429940 UQCRQO14949 82 aa10.46□□□□□ -0.74
LINC00839-202ENST00000429940 IGLV1-51P01701 117 aa10.46□□□□□ -0.74
LINC00839-202ENST00000429940 RNASE1P07998 156 aaKnown RBP10.46□□□□□ -0.74
LINC00839-202ENST00000429940 OBSCN-AS1Q96MR7 158 aa10.46□□□□□ -0.74
LINC00839-202ENST00000429940 VWFP04275 2813 aa10.45□□□□□ -0.74
LINC00839-202ENST00000429940 FBN1P35555 2871 aaKnown RBP10.45□□□□□ -0.74
LINC00839-202ENST00000429940 LINC01006Q8NI28 216 aa10.45□□□□□ -0.74
LINC00839-202ENST00000429940 KLK5Q9Y337 293 aaPredicted RBP10.45□□□□□ -0.74
LINC00839-202ENST00000429940 XCL1P47992 114 aa10.44□□□□□ -0.74
LINC00839-202ENST00000429940 SLPIP03973 132 aa10.44□□□□□ -0.74
LINC00839-202ENST00000429940 DEFB130BP0DP73 79 aa10.44□□□□□ -0.74
LINC00839-202ENST00000429940 DEFB130AP0DP74 79 aa10.44□□□□□ -0.74
LINC00839-202ENST00000429940 NCR3O14931 201 aa10.43□□□□□ -0.74
LINC00839-202ENST00000429940 LINC00526Q96FQ7 95 aa10.43□□□□□ -0.74
LINC00839-202ENST00000429940 HIST1H4AP62805 103 aaKnown RBP10.42□□□□□ -0.74
LINC00839-202ENST00000429940 SS18Q15532 418 aa10.42□□□□□ -0.74
LINC00839-202ENST00000429940 LINC00846Q9NV44 126 aa10.42□□□□□ -0.74
LINC00839-202ENST00000429940 ORMDL1Q9P0S3 153 aa10.41□□□□□ -0.74
LINC00839-202ENST00000429940 GYPEP15421 78 aa10.41□□□□□ -0.74
LINC00839-202ENST00000429940 COX7CP15954 63 aa10.41□□□□□ -0.74
LINC00839-202ENST00000429940 Q8IZM0 81 aa10.41□□□□□ -0.74
LINC00839-202ENST00000429940 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
LINC00839-202ENST00000429940 ATOX1O00244 68 aa10.4□□□□□ -0.74
LINC00839-202ENST00000429940 CLPSL2Q6UWE3 100 aa10.4□□□□□ -0.74
LINC00839-202ENST00000429940 Q6JHZ5 121 aa10.4□□□□□ -0.75
LINC00839-202ENST00000429940 TRRAPQ9Y4A5 3859 aa10.39□□□□□ -0.75
LINC00839-202ENST00000429940 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
LINC00839-202ENST00000429940 A0A1B0GUV1 79 aa10.38□□□□□ -0.75
LINC00839-202ENST00000429940 KIR2DL5BQ8NHK3 375 aa10.38□□□□□ -0.75
LINC00839-202ENST00000429940 C16orf95Q9H693 158 aa10.38□□□□□ -0.75
LINC00839-202ENST00000429940 RPL18AQ02543 176 aaKnown RBP10.37□□□□□ -0.75
LINC00839-202ENST00000429940 KRTAP10-3P60369 221 aa10.36□□□□□ -0.75
LINC00839-202ENST00000429940 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
LINC00839-202ENST00000429940 A0A096LPF7 62 aa10.36□□□□□ -0.75
LINC00839-202ENST00000429940 LINC01561Q8N1V8 128 aa10.36□□□□□ -0.75
LINC00839-202ENST00000429940 LINC00612Q8N6U2 182 aa10.36□□□□□ -0.75
LINC00839-202ENST00000429940 LINC00167Q96N53 147 aa10.35□□□□□ -0.75
LINC00839-202ENST00000429940 CCKP06307 115 aa10.35□□□□□ -0.75
LINC00839-202ENST00000429940 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
LINC00839-202ENST00000429940 STAB1Q9NY15 2570 aa10.34□□□□□ -0.75
LINC00839-202ENST00000429940 CRYGAP11844 174 aa10.34□□□□□ -0.75
LINC00839-202ENST00000429940 Q8N814 137 aa10.34□□□□□ -0.75
LINC00839-202ENST00000429940 A0A087WVE0 104 aa10.33□□□□□ -0.76
LINC00839-202ENST00000429940 A0A1B0GX51 115 aa10.33□□□□□ -0.76
LINC00839-202ENST00000429940 PRO0255Q9UI72 69 aa10.33□□□□□ -0.76
LINC00839-202ENST00000429940 CFAP161Q6P656 301 aa10.32□□□□□ -0.76
LINC00839-202ENST00000429940 JMJD7-PLA2G4BH0Y9G9 81 aa10.32□□□□□ -0.76
LINC00839-202ENST00000429940 NDUFC2O95298 119 aa10.32□□□□□ -0.76
LINC00839-202ENST00000429940 COX17Q14061 63 aa10.32□□□□□ -0.76
LINC00839-202ENST00000429940 LINC00269Q8N2A0 174 aa10.32□□□□□ -0.76
LINC00839-202ENST00000429940 KIAA0087Q14695 138 aa10.31□□□□□ -0.76
LINC00839-202ENST00000429940 COL6A5A8TX70 2615 aa10.31□□□□□ -0.76
LINC00839-202ENST00000429940 TMEM256-PLSCR3K7ERE1 68 aa10.31□□□□□ -0.76
LINC00839-202ENST00000429940 CD164L2Q6UWJ8 174 aa10.31□□□□□ -0.76
LINC00839-202ENST00000429940 hADV29S1A0JD25 119 aa10.3□□□□□ -0.76
LINC00839-202ENST00000429940 X6R8D5 127 aa10.3□□□□□ -0.76
LINC00839-202ENST00000429940 IGLV10-54A0A075B6I4 117 aa10.3□□□□□ -0.76
LINC00839-202ENST00000429940 C9orf116Q5BN46 136 aaPredicted RBP10.29□□□□□ -0.76
LINC00839-202ENST00000429940 SERP2Q8N6R1 65 aa10.29□□□□□ -0.76
LINC00839-202ENST00000429940 CHCHD10Q8WYQ3 142 aaPredicted RBP10.29□□□□□ -0.76
LINC00839-202ENST00000429940 USP17L23D6RBM5 183 aa10.28□□□□□ -0.76
LINC00839-202ENST00000429940 S100A7L2Q5SY68 101 aa10.28□□□□□ -0.76
LINC00839-202ENST00000429940 PKD1L1Q8TDX9 2849 aa10.28□□□□□ -0.76
LINC00839-202ENST00000429940 ANGP03950 147 aaKnown RBP10.27□□□□□ -0.76
LINC00839-202ENST00000429940 IGHV4-28A0A0C4DH34 117 aa10.27□□□□□ -0.77
LINC00839-202ENST00000429940 SMIM9A6NGZ8 99 aa10.27□□□□□ -0.77
LINC00839-202ENST00000429940 REG3AQ06141 175 aa10.27□□□□□ -0.77
LINC00839-202ENST00000429940 C6orf99Q4VX62 202 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms