RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 GYPEP15421 78 aa7.98□□□□□ -1.13
LINC01238-203ENST00000429456 HILS1P60008 231 aa7.98□□□□□ -1.13
LINC01238-203ENST00000429456 C6orf226Q5I0X4 101 aa7.97□□□□□ -1.13
LINC01238-203ENST00000429456 SETD2Q9BYW2 2564 aaPredicted RBP7.97□□□□□ -1.13
LINC01238-203ENST00000429456 SS18Q15532 418 aa7.97□□□□□ -1.13
LINC01238-203ENST00000429456 MRAPQ8TCY5 172 aa7.97□□□□□ -1.13
LINC01238-203ENST00000429456 PAX4O43316 350 aa7.96□□□□□ -1.14
LINC01238-203ENST00000429456 DNAL4O96015 105 aa7.96□□□□□ -1.14
LINC01238-203ENST00000429456 Q8IZM0 81 aa7.96□□□□□ -1.14
LINC01238-203ENST00000429456 X6R8D5 127 aa7.96□□□□□ -1.14
LINC01238-203ENST00000429456 LY6G6DO95868 133 aa7.95□□□□□ -1.14
LINC01238-203ENST00000429456 XCL1P47992 114 aa7.95□□□□□ -1.14
LINC01238-203ENST00000429456 LINC01561Q8N1V8 128 aa7.95□□□□□ -1.14
LINC01238-203ENST00000429456 TENM4Q6N022 2769 aa7.95□□□□□ -1.14
LINC01238-203ENST00000429456 KRTAP10-3P60369 221 aa7.95□□□□□ -1.14
LINC01238-203ENST00000429456 GAGE2AQ6NT46 116 aa7.95□□□□□ -1.14
LINC01238-203ENST00000429456 C11orf68Q9H3H3 251 aaKnown RBP7.95□□□□□ -1.14
LINC01238-203ENST00000429456 ATP5G1P05496 136 aa7.94□□□□□ -1.14
LINC01238-203ENST00000429456 LINC00482Q8N8I6 264 aa7.94□□□□□ -1.14
LINC01238-203ENST00000429456 OBSCN-AS1Q96MR7 158 aa7.94□□□□□ -1.14
LINC01238-203ENST00000429456 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
LINC01238-203ENST00000429456 PRO0255Q9UI72 69 aa7.94□□□□□ -1.14
LINC01238-203ENST00000429456 ACANP16112 2415 aa7.94□□□□□ -1.14
LINC01238-203ENST00000429456 FAM236AA0A1B0GUQ0 79 aa7.94□□□□□ -1.14
LINC01238-203ENST00000429456 FAM236BA0A1B0GV22 79 aa7.94□□□□□ -1.14
LINC01238-203ENST00000429456 C9orf129Q5T035 196 aaKnown RBP7.94□□□□□ -1.14
LINC01238-203ENST00000429456 OR13C6PQ8NH95 151 aa7.94□□□□□ -1.14
LINC01238-203ENST00000429456 KMT2BQ9UMN6 2715 aaPredicted RBP7.93□□□□□ -1.14
LINC01238-203ENST00000429456 NIPBLQ6KC79 2804 aaeCLIP7.93□□□□□ -1.14
LINC01238-203ENST00000429456 LECT2O14960 151 aa7.93□□□□□ -1.14
LINC01238-203ENST00000429456 FAM19A5Q7Z5A7 132 aaPredicted RBP7.93□□□□□ -1.14
LINC01238-203ENST00000429456 LOC107984640A0A0U1RRK4 108 aa7.93□□□□□ -1.14
LINC01238-203ENST00000429456 CXCL5P42830 114 aa7.93□□□□□ -1.14
LINC01238-203ENST00000429456 CLPSL2Q6UWE3 100 aa7.93□□□□□ -1.14
LINC01238-203ENST00000429456 PDZD2O15018 2839 aa7.92□□□□□ -1.14
LINC01238-203ENST00000429456 A0A096LPF7 62 aa7.91□□□□□ -1.14
LINC01238-203ENST00000429456 MTORP42345 2549 aa7.91□□□□□ -1.14
LINC01238-203ENST00000429456 FN1P02751 2386 aaKnown RBP7.91□□□□□ -1.14
LINC01238-203ENST00000429456 KIAA0087Q14695 138 aa7.91□□□□□ -1.14
LINC01238-203ENST00000429456 C14orf132Q9NPU4 83 aa7.91□□□□□ -1.14
LINC01238-203ENST00000429456 LYRM9A8MSI8 78 aa7.9□□□□□ -1.14
LINC01238-203ENST00000429456 CD164L2Q6UWJ8 174 aa7.9□□□□□ -1.14
LINC01238-203ENST00000429456 KLK5Q9Y337 293 aaPredicted RBP7.9□□□□□ -1.14
LINC01238-203ENST00000429456 SLPIP03973 132 aa7.89□□□□□ -1.15
LINC01238-203ENST00000429456 NANOS2P60321 138 aaKnown RBP7.89□□□□□ -1.15
LINC01238-203ENST00000429456 LINC00269Q8N2A0 174 aa7.89□□□□□ -1.15
LINC01238-203ENST00000429456 LINC00167Q96N53 147 aa7.89□□□□□ -1.15
LINC01238-203ENST00000429456 NDUFC2O95298 119 aa7.88□□□□□ -1.15
LINC01238-203ENST00000429456 COX17Q14061 63 aa7.88□□□□□ -1.15
LINC01238-203ENST00000429456 CHCHD10Q8WYQ3 142 aaPredicted RBP7.88□□□□□ -1.15
LINC01238-203ENST00000429456 ORMDL1Q9P0S3 153 aa7.88□□□□□ -1.15
LINC01238-203ENST00000429456 NCR3O14931 201 aa7.88□□□□□ -1.15
LINC01238-203ENST00000429456 IGHV4-28A0A0C4DH34 117 aa7.87□□□□□ -1.15
LINC01238-203ENST00000429456 A0A1B0GX51 115 aa7.87□□□□□ -1.15
LINC01238-203ENST00000429456 PRR3P79522 188 aaKnown RBP7.87□□□□□ -1.15
LINC01238-203ENST00000429456 SPATA3Q8NHX4 192 aa7.87□□□□□ -1.15
LINC01238-203ENST00000429456 HELZ2Q9BYK8 2649 aaKnown RBP7.86□□□□□ -1.15
LINC01238-203ENST00000429456 REG3AQ06141 175 aa7.86□□□□□ -1.15
LINC01238-203ENST00000429456 Q8N3U1 123 aa7.86□□□□□ -1.15
LINC01238-203ENST00000429456 SMR3AQ99954 134 aa7.86□□□□□ -1.15
LINC01238-203ENST00000429456 LINC00846Q9NV44 126 aa7.86□□□□□ -1.15
LINC01238-203ENST00000429456 ANGP03950 147 aaKnown RBP7.86□□□□□ -1.15
LINC01238-203ENST00000429456 HIST1H4AP62805 103 aaKnown RBP7.86□□□□□ -1.15
LINC01238-203ENST00000429456 C9orf66Q5T8R8 295 aa7.86□□□□□ -1.15
LINC01238-203ENST00000429456 IGLV10-54A0A075B6I4 117 aa7.85□□□□□ -1.15
LINC01238-203ENST00000429456 DEFB4AO15263 64 aa7.85□□□□□ -1.15
LINC01238-203ENST00000429456 DEFB135Q30KP9 77 aa7.85□□□□□ -1.15
LINC01238-203ENST00000429456 Q6JHZ5 121 aa7.85□□□□□ -1.15
LINC01238-203ENST00000429456 Q8N814 137 aa7.85□□□□□ -1.15
LINC01238-203ENST00000429456 LCE2DQ5TA82 110 aaPredicted RBP7.84□□□□□ -1.15
LINC01238-203ENST00000429456 C3orf22Q8N5N4 141 aa7.84□□□□□ -1.15
LINC01238-203ENST00000429456 J3KT08 172 aa7.84□□□□□ -1.15
LINC01238-203ENST00000429456 DAD1P61803 113 aa7.84□□□□□ -1.15
LINC01238-203ENST00000429456 C9orf116Q5BN46 136 aaPredicted RBP7.84□□□□□ -1.15
LINC01238-203ENST00000429456 UQCRQO14949 82 aa7.83□□□□□ -1.16
LINC01238-203ENST00000429456 CCKP06307 115 aa7.83□□□□□ -1.16
LINC01238-203ENST00000429456 APOC4P55056 127 aa7.83□□□□□ -1.16
LINC01238-203ENST00000429456 Q8NDZ9 215 aa7.83□□□□□ -1.16
LINC01238-203ENST00000429456 HIVEP2P31629 2446 aa7.82□□□□□ -1.16
LINC01238-203ENST00000429456 IGKV3D-7A0A0C4DH55 119 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 JMJD7-PLA2G4BH0Y9G9 81 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 TMEM256-PLSCR3K7ERE1 68 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 C3orf56Q8N813 242 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 LINC00526Q96FQ7 95 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 KRTAP3-3Q9BYR6 98 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 CELA1Q9UNI1 258 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 GCN1Q92616 2671 aaKnown RBP7.81□□□□□ -1.16
LINC01238-203ENST00000429456 C9orf153Q5TBE3 101 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 Q8NAQ8 132 aa7.81□□□□□ -1.16
LINC01238-203ENST00000429456 ATOX1O00244 68 aa7.8□□□□□ -1.16
LINC01238-203ENST00000429456 COX7CP15954 63 aa7.8□□□□□ -1.16
LINC01238-203ENST00000429456 C2orf48Q96LS8 159 aa7.8□□□□□ -1.16
LINC01238-203ENST00000429456 ITPR2Q14571 2701 aa7.8□□□□□ -1.16
LINC01238-203ENST00000429456 J3QKU1 62 aa7.8□□□□□ -1.16
LINC01238-203ENST00000429456 MIFP14174 115 aa7.8□□□□□ -1.16
LINC01238-203ENST00000429456 C6orf99Q4VX62 202 aa7.8□□□□□ -1.16
LINC01238-203ENST00000429456 C10orf25Q5T742 122 aa7.8□□□□□ -1.16
LINC01238-203ENST00000429456 LELP1Q5T871 98 aa7.8□□□□□ -1.16
LINC01238-203ENST00000429456 MUC7Q8TAX7 377 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms