RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 X6R8D5 127 aa12.03□□□□□ -0.48
SMARCA4-203ENST00000429416 SPATA3Q8NHX4 192 aa12.03□□□□□ -0.48
SMARCA4-203ENST00000429416 C1orf137Q5JT78 98 aa12.03□□□□□ -0.48
SMARCA4-203ENST00000429416 DHRS4-AS1Q9P1J3 65 aa12.03□□□□□ -0.48
SMARCA4-203ENST00000429416 TEP1Q99973 2627 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-203ENST00000429416 Q6ZQY7 126 aa12.02□□□□□ -0.49
SMARCA4-203ENST00000429416 PDE6GP18545 87 aa12.01□□□□□ -0.49
SMARCA4-203ENST00000429416 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-203ENST00000429416 BPTFQ12830 3046 aa12.01□□□□□ -0.49
SMARCA4-203ENST00000429416 A0A1B0GUV1 79 aa12□□□□□ -0.49
SMARCA4-203ENST00000429416 COX8CQ7Z4L0 72 aa12□□□□□ -0.49
SMARCA4-203ENST00000429416 SMIM1B2RUZ4 78 aa12□□□□□ -0.49
SMARCA4-203ENST00000429416 ACYP1P07311 99 aa12□□□□□ -0.49
SMARCA4-203ENST00000429416 MP68P56378 58 aa11.99□□□□□ -0.49
SMARCA4-203ENST00000429416 H3BT86 120 aa11.99□□□□□ -0.49
SMARCA4-203ENST00000429416 K7EIL1 84 aa11.98□□□□□ -0.49
SMARCA4-203ENST00000429416 BPY2O14599 106 aa11.98□□□□□ -0.49
SMARCA4-203ENST00000429416 WFDC2Q14508 124 aa11.98□□□□□ -0.49
SMARCA4-203ENST00000429416 TRANK1O15050 2925 aa11.98□□□□□ -0.49
SMARCA4-203ENST00000429416 KRTAP1-3Q8IUG1 177 aa11.98□□□□□ -0.49
SMARCA4-203ENST00000429416 TCL1BO95988 128 aa11.97□□□□□ -0.49
SMARCA4-203ENST00000429416 TEN1Q86WV5 123 aa11.97□□□□□ -0.49
SMARCA4-203ENST00000429416 PTH2Q96A98 100 aa11.97□□□□□ -0.49
SMARCA4-203ENST00000429416 TIMM17BO60830 172 aa11.97□□□□□ -0.49
SMARCA4-203ENST00000429416 IGKV4-1P06312 121 aa11.96□□□□□ -0.49
SMARCA4-203ENST00000429416 CCKP06307 115 aa11.96□□□□□ -0.49
SMARCA4-203ENST00000429416 CSDC2Q9Y534 153 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-203ENST00000429416 KRTAP10-11P60412 298 aa11.95□□□□□ -0.5
SMARCA4-203ENST00000429416 CIRBP-AS1Q8TBR5 109 aa11.95□□□□□ -0.5
SMARCA4-203ENST00000429416 MUC4Q99102 2169 aa11.95□□□□□ -0.5
SMARCA4-203ENST00000429416 NDUFC2-KCTD14E9PQ53 114 aa11.95□□□□□ -0.5
SMARCA4-203ENST00000429416 CHKB-CPT1BH3BT56 60 aa11.95□□□□□ -0.5
SMARCA4-203ENST00000429416 C3orf84H3BNL1 204 aa11.95□□□□□ -0.5
SMARCA4-203ENST00000429416 REG3GQ6UW15 175 aa11.95□□□□□ -0.5
SMARCA4-203ENST00000429416 Q8NAQ8 132 aa11.94□□□□□ -0.5
SMARCA4-203ENST00000429416 TAX1BP3O14907 124 aa11.94□□□□□ -0.5
SMARCA4-203ENST00000429416 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-203ENST00000429416 TRIAP1O43715 76 aa11.94□□□□□ -0.5
SMARCA4-203ENST00000429416 Q6ZRU5 148 aa11.94□□□□□ -0.5
SMARCA4-203ENST00000429416 MGAQ8IWI9 3026 aa11.94□□□□□ -0.5
SMARCA4-203ENST00000429416 SMIM11BQ8TCY0 68 aa11.93□□□□□ -0.5
SMARCA4-203ENST00000429416 TRBV10-3A0A0K0K1G6 114 aa11.93□□□□□ -0.5
SMARCA4-203ENST00000429416 KRTAP10-3P60369 221 aa11.93□□□□□ -0.5
SMARCA4-203ENST00000429416 LINC00315P59091 139 aa11.93□□□□□ -0.5
SMARCA4-203ENST00000429416 SCXQ7RTU7 201 aa11.92□□□□□ -0.5
SMARCA4-203ENST00000429416 SS18L2Q9UHA2 77 aa11.92□□□□□ -0.5
SMARCA4-203ENST00000429416 C16orf90A8MZG2 172 aa11.91□□□□□ -0.5
SMARCA4-203ENST00000429416 C2orf48Q96LS8 159 aa11.91□□□□□ -0.5
SMARCA4-203ENST00000429416 NBDYA0A0U1RRE5 68 aa11.91□□□□□ -0.5
SMARCA4-203ENST00000429416 YPEL4Q96NS1 127 aa11.9□□□□□ -0.5
SMARCA4-203ENST00000429416 KRTAP1-1Q07627 177 aa11.89□□□□□ -0.51
SMARCA4-203ENST00000429416 MRPL55Q7Z7F7 128 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-203ENST00000429416 UPK3BQ9BT76 320 aa11.89□□□□□ -0.51
SMARCA4-203ENST00000429416 AMELXQ99217 191 aa11.88□□□□□ -0.51
SMARCA4-203ENST00000429416 WDFY4Q6ZS81 3184 aa11.87□□□□□ -0.51
SMARCA4-203ENST00000429416 LINC00588Q9Y4M8 146 aa11.87□□□□□ -0.51
SMARCA4-203ENST00000429416 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
SMARCA4-203ENST00000429416 KIF25-AS1Q9Y6Z4 181 aa11.87□□□□□ -0.51
SMARCA4-203ENST00000429416 FAM19A4Q96LR4 140 aa11.87□□□□□ -0.51
SMARCA4-203ENST00000429416 H3BNG1 76 aa11.86□□□□□ -0.51
SMARCA4-203ENST00000429416 NTM-AS1Q6ZSK4 140 aa11.86□□□□□ -0.51
SMARCA4-203ENST00000429416 BAHCC1Q9P281 2608 aa11.85□□□□□ -0.51
SMARCA4-203ENST00000429416 URB1-AS1Q96HZ7 61 aa11.84□□□□□ -0.51
SMARCA4-203ENST00000429416 DSPP15924 2871 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-203ENST00000429416 F8WDY8 70 aa11.84□□□□□ -0.51
SMARCA4-203ENST00000429416 FAM229AH3BQW9 127 aa11.83□□□□□ -0.52
SMARCA4-203ENST00000429416 Q8N3U1 123 aa11.83□□□□□ -0.52
SMARCA4-203ENST00000429416 Q9UF83 564 aa11.83□□□□□ -0.52
SMARCA4-203ENST00000429416 UNC80Q8N2C7 3258 aa11.83□□□□□ -0.52
SMARCA4-203ENST00000429416 TEX49A0A1B0GTD5 131 aa11.82□□□□□ -0.52
SMARCA4-203ENST00000429416 XGP55808 180 aa11.81□□□□□ -0.52
SMARCA4-203ENST00000429416 PRLHP81277 87 aa11.81□□□□□ -0.52
SMARCA4-203ENST00000429416 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-203ENST00000429416 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
SMARCA4-203ENST00000429416 TSPEAR-AS2P59090 65 aa11.8□□□□□ -0.52
SMARCA4-203ENST00000429416 RTL8CO15255 209 aa11.8□□□□□ -0.52
SMARCA4-203ENST00000429416 LAMA2P24043 3122 aaKnown RBP11.79□□□□□ -0.52
SMARCA4-203ENST00000429416 CASC2Q6XLA1 102 aa11.79□□□□□ -0.52
SMARCA4-203ENST00000429416 C22orf24Q9Y442 160 aa11.79□□□□□ -0.52
SMARCA4-203ENST00000429416 NDUFV3P56181 108 aaKnown RBP11.78□□□□□ -0.52
SMARCA4-203ENST00000429416 TRIOO75962 3097 aa11.77□□□□□ -0.53
SMARCA4-203ENST00000429416 FAM236AA0A1B0GUQ0 79 aa11.77□□□□□ -0.53
SMARCA4-203ENST00000429416 FAM236BA0A1B0GV22 79 aa11.77□□□□□ -0.53
SMARCA4-203ENST00000429416 WFDC13Q8IUB5 93 aa11.76□□□□□ -0.53
SMARCA4-203ENST00000429416 ADAMTSL4-AS1Q5T5F5 129 aa11.76□□□□□ -0.53
SMARCA4-203ENST00000429416 C19orf73Q9NVV2 129 aa11.75□□□□□ -0.53
SMARCA4-203ENST00000429416 Q9BRP9 147 aa11.75□□□□□ -0.53
SMARCA4-203ENST00000429416 LINC00310P59036 64 aa11.74□□□□□ -0.53
SMARCA4-203ENST00000429416 KLK9Q2XQG4 91 aa11.74□□□□□ -0.53
SMARCA4-203ENST00000429416 IGHV3OR16-9A0A0B4J2B5 98 aa11.73□□□□□ -0.53
SMARCA4-203ENST00000429416 LINC01561Q8N1V8 128 aa11.73□□□□□ -0.53
SMARCA4-203ENST00000429416 LST1O00453 97 aa11.73□□□□□ -0.53
SMARCA4-203ENST00000429416 A0A096LNJ9 63 aa11.73□□□□□ -0.53
SMARCA4-203ENST00000429416 C2orf91Q6ZV80 131 aa11.73□□□□□ -0.53
SMARCA4-203ENST00000429416 PRYO14603 147 aa11.73□□□□□ -0.53
SMARCA4-203ENST00000429416 A8MTW9 85 aa11.72□□□□□ -0.53
SMARCA4-203ENST00000429416 SDIM1Q6ZPB5 146 aa11.72□□□□□ -0.53
SMARCA4-203ENST00000429416 ENHOQ6UWT2 76 aa11.71□□□□□ -0.53
SMARCA4-203ENST00000429416 STAB1Q9NY15 2570 aa11.71□□□□□ -0.53
SMARCA4-203ENST00000429416 AKAP13Q12802 2813 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms