RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 NDUFA1O15239 70 aa8.11□□□□□ -1.11
CECR3-201ENST00000428828 CIRBPQ14011 172 aaKnown RBP8.11□□□□□ -1.11
CECR3-201ENST00000428828 ATP5EP2Q5VTU8 51 aa8.11□□□□□ -1.11
CECR3-201ENST00000428828 NBEAL2Q6ZNJ1 2754 aa8.11□□□□□ -1.11
CECR3-201ENST00000428828 IGHV3-64A0A075B6Q5 118 aa8.11□□□□□ -1.11
CECR3-201ENST00000428828 IGHV3OR16-12A0A075B7B8 117 aa8.11□□□□□ -1.11
CECR3-201ENST00000428828 TRAV12-3A0A0B4J271 114 aa8.11□□□□□ -1.11
CECR3-201ENST00000428828 LINC01561Q8N1V8 128 aa8.11□□□□□ -1.11
CECR3-201ENST00000428828 UBE2D4Q9Y2X8 147 aa8.11□□□□□ -1.11
CECR3-201ENST00000428828 MEGF8Q7Z7M0 2845 aa8.1□□□□□ -1.11
CECR3-201ENST00000428828 M0QY20 66 aa8.1□□□□□ -1.11
CECR3-201ENST00000428828 DNAL4O96015 105 aa8.1□□□□□ -1.11
CECR3-201ENST00000428828 APOC4P55056 127 aa8.1□□□□□ -1.11
CECR3-201ENST00000428828 KLLNB2CW77 178 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 INSP01308 110 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 GIG44P09565 113 aaPredicted RBP8.09□□□□□ -1.11
CECR3-201ENST00000428828 DEFB135Q30KP9 77 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 FAM236DA0A1B0GTK5 79 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 RBMY1A1P0DJD3 496 aaKnown RBP8.09□□□□□ -1.11
CECR3-201ENST00000428828 RBMY1CP0DJD4 496 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 FAM236CP0DP71 79 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 HTN1P15515 57 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 RBMY1FQ15415 496 aaKnown RBP8.09□□□□□ -1.11
CECR3-201ENST00000428828 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 LINC00336Q6ZUF6 198 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 LINC00308Q8TCZ7 52 aa8.09□□□□□ -1.11
CECR3-201ENST00000428828 OPRPNQ99935 248 aaPredicted RBP8.09□□□□□ -1.11
CECR3-201ENST00000428828 A8MZ25 164 aa8.08□□□□□ -1.12
CECR3-201ENST00000428828 GNRH2O43555 120 aa8.08□□□□□ -1.12
CECR3-201ENST00000428828 FHL2Q14192 279 aa8.08□□□□□ -1.12
CECR3-201ENST00000428828 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
CECR3-201ENST00000428828 RETNQ9HD89 108 aa8.07□□□□□ -1.12
CECR3-201ENST00000428828 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
CECR3-201ENST00000428828 SMIM26A0A096LP01 95 aa8.07□□□□□ -1.12
CECR3-201ENST00000428828 PRM2P04554 102 aa8.07□□□□□ -1.12
CECR3-201ENST00000428828 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
CECR3-201ENST00000428828 F5H697 171 aa8.06□□□□□ -1.12
CECR3-201ENST00000428828 RS1O15537 224 aa8.06□□□□□ -1.12
CECR3-201ENST00000428828 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
CECR3-201ENST00000428828 C1orf158Q8N1D5 194 aa8.06□□□□□ -1.12
CECR3-201ENST00000428828 CSNK1G2-AS1Q8NCQ2 148 aa8.05□□□□□ -1.12
CECR3-201ENST00000428828 C1orf43Q9BWL3 253 aa8.05□□□□□ -1.12
CECR3-201ENST00000428828 TMEM243Q9BU79 118 aa8.05□□□□□ -1.12
CECR3-201ENST00000428828 LINC00846Q9NV44 126 aa8.05□□□□□ -1.12
CECR3-201ENST00000428828 LYPD5Q6UWN5 251 aa8.04□□□□□ -1.12
CECR3-201ENST00000428828 TENM3Q9P273 2699 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 A0A087WWL8 130 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 IGKV3D-7A0A0C4DH55 119 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 SEC61GP60059 68 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 COL7A1Q02388 2944 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 IGHV1OR15-1A0A075B7D0 117 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 TRAV13-2A0A0B4J235 113 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 IGLV5-39A0A0G2JS06 123 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 FAM218AQ96MZ4 157 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 V9GYY9 64 aa8.03□□□□□ -1.12
CECR3-201ENST00000428828 H0YGX0 51 aa8.02□□□□□ -1.13
CECR3-201ENST00000428828 GHRHP01286 108 aa8.01□□□□□ -1.13
CECR3-201ENST00000428828 XCL1P47992 114 aa8.01□□□□□ -1.13
CECR3-201ENST00000428828 X6R8D5 127 aa8.01□□□□□ -1.13
CECR3-201ENST00000428828 A0A087WVE0 104 aa8.01□□□□□ -1.13
CECR3-201ENST00000428828 H7BZZ5 65 aa8.01□□□□□ -1.13
CECR3-201ENST00000428828 DEFB4AO15263 64 aa8.01□□□□□ -1.13
CECR3-201ENST00000428828 ATP5EP56381 51 aaPredicted RBP8.01□□□□□ -1.13
CECR3-201ENST00000428828 KLKP1Q107X0 134 aa8.01□□□□□ -1.13
CECR3-201ENST00000428828 MUC4Q99102 2169 aa8□□□□□ -1.13
CECR3-201ENST00000428828 IGHV3-16A0A0C4DH30 117 aa8□□□□□ -1.13
CECR3-201ENST00000428828 FAM19A3Q7Z5A8 133 aa8□□□□□ -1.13
CECR3-201ENST00000428828 B9D2Q9BPU9 175 aa8□□□□□ -1.13
CECR3-201ENST00000428828 PRKDCP78527 4128 aaKnown RBP7.99□□□□□ -1.13
CECR3-201ENST00000428828 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
CECR3-201ENST00000428828 IGHV4-28A0A0C4DH34 117 aa7.99□□□□□ -1.13
CECR3-201ENST00000428828 CCKP06307 115 aa7.99□□□□□ -1.13
CECR3-201ENST00000428828 SOSTDC1Q6X4U4 206 aa7.99□□□□□ -1.13
CECR3-201ENST00000428828 TM2D3Q9BRN9 247 aa7.99□□□□□ -1.13
CECR3-201ENST00000428828 NDUFC1O43677 76 aa7.98□□□□□ -1.13
CECR3-201ENST00000428828 C16orf74Q96GX8 76 aa7.98□□□□□ -1.13
CECR3-201ENST00000428828 FAM74A4Q5TZK3 123 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 DEFB104AQ8WTQ1 72 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 LINC00467Q9BRT7 94 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 C14orf132Q9NPU4 83 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 DNAH9Q9NYC9 4486 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 MIFP14174 115 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 C1orf195Q5TG92 126 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 FP248Q71RG6 208 aaPredicted RBP7.97□□□□□ -1.13
CECR3-201ENST00000428828 C20orf197Q8N268 126 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 Q8NAQ8 132 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 C11orf72Q8NBR9 251 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 Q9H8V8 135 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 FBN3Q75N90 2809 aa7.97□□□□□ -1.13
CECR3-201ENST00000428828 ZNF625Q96I27 306 aaPredicted RBP7.96□□□□□ -1.13
CECR3-201ENST00000428828 NOP10Q9NPE3 64 aaKnown RBP7.96□□□□□ -1.13
CECR3-201ENST00000428828 HUWE1Q7Z6Z7 4374 aaKnown RBP7.96□□□□□ -1.14
CECR3-201ENST00000428828 PIK3CD-AS1Q5SR53 167 aa7.95□□□□□ -1.14
CECR3-201ENST00000428828 Q9HAA7 133 aa7.95□□□□□ -1.14
CECR3-201ENST00000428828 CDKN2A-AS1Q9UH64 79 aa7.95□□□□□ -1.14
CECR3-201ENST00000428828 NACAE9PAV3 2078 aa7.95□□□□□ -1.14
CECR3-201ENST00000428828 A0A0J9YWU9 116 aa7.95□□□□□ -1.14
CECR3-201ENST00000428828 PLAC8L1A1L4L8 177 aa7.95□□□□□ -1.14
CECR3-201ENST00000428828 JMJD7-PLA2G4BH0Y9G9 81 aa7.95□□□□□ -1.14
CECR3-201ENST00000428828 CRPP02741 224 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms