RNA–Protein interactions for RNA: ENST00000428744.1

KIF3A-204, Transcript of kinesin family member 3A, humanhuman

TSL 5

Gene KIF3A, Length 658 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-204ENST00000428744 COX14Q96I36 57 aa2.45□□□□□ -2.02
KIF3A-204ENST00000428744 RETNLBQ9BQ08 111 aa2.45□□□□□ -2.02
KIF3A-204ENST00000428744 EML5Q05BV3 1969 aa2.45□□□□□ -2.02
KIF3A-204ENST00000428744 SHANK1Q9Y566 2161 aa2.44□□□□□ -2.02
KIF3A-204ENST00000428744 IGKV1D-37A0A075B6S9 117 aa2.44□□□□□ -2.02
KIF3A-204ENST00000428744 TRAV10A0A0B4J240 114 aa2.44□□□□□ -2.02
KIF3A-204ENST00000428744 TRAV21A0A0B4J279 112 aa2.44□□□□□ -2.02
KIF3A-204ENST00000428744 TRBV6-5A0A0K0K1A5 114 aa2.44□□□□□ -2.02
KIF3A-204ENST00000428744 MOBPQ13875 183 aa2.44□□□□□ -2.02
KIF3A-204ENST00000428744 LINC00308Q8TCZ7 52 aa2.44□□□□□ -2.02
KIF3A-204ENST00000428744 MYOFQ9NZM1 2061 aa2.44□□□□□ -2.02
KIF3A-204ENST00000428744 TET1Q8NFU7 2136 aa2.44□□□□□ -2.02
KIF3A-204ENST00000428744 TANC2Q9HCD6 1990 aa2.43□□□□□ -2.02
KIF3A-204ENST00000428744 DYSFO75923 2080 aa2.43□□□□□ -2.02
KIF3A-204ENST00000428744 H3BPC8 53 aa2.43□□□□□ -2.02
KIF3A-204ENST00000428744 POLR2KP53803 58 aaKnown RBP2.43□□□□□ -2.02
KIF3A-204ENST00000428744 MIR7-3HGQ8N6C7 128 aa2.43□□□□□ -2.02
KIF3A-204ENST00000428744 ZCCHC13Q8WW36 166 aaKnown RBP2.43□□□□□ -2.02
KIF3A-204ENST00000428744 SND1-IT1Q9HBX3 110 aa2.43□□□□□ -2.02
KIF3A-204ENST00000428744 NDUFA4L2Q9NRX3 87 aa2.43□□□□□ -2.02
KIF3A-204ENST00000428744 LENEPQ9Y5L5 61 aa2.43□□□□□ -2.02
KIF3A-204ENST00000428744 COL4A1P02462 1669 aa2.43□□□□□ -2.02
KIF3A-204ENST00000428744 RANBP2P49792 3224 aaKnown RBP2.43□□□□□ -2.02
KIF3A-204ENST00000428744 GCN1Q92616 2671 aaKnown RBP2.43□□□□□ -2.02
KIF3A-204ENST00000428744 MUC6Q6W4X9 2439 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 ZDBF2Q9HCK1 2354 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 C2orf16Q68DN1 1984 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 C10orf142B7Z368 130 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 H3BRN7 92 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 CRPP02741 224 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 CLPSP04118 112 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 LINC00315P59091 139 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 BSPH1Q075Z2 132 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 Q6ZS52 159 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 PRR15LQ9BU68 103 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 S4R3C0 116 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 FREM3P0C091 2139 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 MYO18BQ8IUG5 2567 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 CENPFP49454 3210 aa2.42□□□□□ -2.02
KIF3A-204ENST00000428744 HEATR5BQ9P2D3 2071 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 TRBV10-1A0A0K0K1A3 114 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 IGHV1-46P01743 117 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 CNBPP62633 177 aaKnown RBP2.41□□□□□ -2.02
KIF3A-204ENST00000428744 HAMPP81172 84 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 Q6ZQT0 140 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 Q8N814 137 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 ST20-AS1Q8NBB2 130 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 TMEM167AQ8TBQ9 72 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 LINC00208Q96KT6 92 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 B9D2Q9BPU9 175 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 KLK9Q9UKQ9 250 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 LINC01558Q9Y6Z2 57 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 MYO7AQ13402 2215 aa2.41□□□□□ -2.02
KIF3A-204ENST00000428744 FBN3Q75N90 2809 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 IGHV3-73A0A0B4J1V6 119 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 H0YGG7 62 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 NCR3O14931 201 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 IGLV1-51P01701 117 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 HCP5Q6MZN7 132 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 WFDC9Q8NEX5 89 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 BRCA2P51587 3418 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 NACAE9PAV3 2078 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 MPDZO75970 2070 aa2.4□□□□□ -2.03
KIF3A-204ENST00000428744 IGKV2-29A2NJV5 120 aaPredicted RBP2.39□□□□□ -2.03
KIF3A-204ENST00000428744 K7ERS5 55 aa2.39□□□□□ -2.03
KIF3A-204ENST00000428744 LECT2O14960 151 aa2.39□□□□□ -2.03
KIF3A-204ENST00000428744 RTL8CO15255 209 aa2.39□□□□□ -2.03
KIF3A-204ENST00000428744 IGLV7-43P04211 117 aa2.39□□□□□ -2.03
KIF3A-204ENST00000428744 CCL5P13501 91 aa2.39□□□□□ -2.03
KIF3A-204ENST00000428744 HIGD2AQ9BW72 106 aa2.39□□□□□ -2.03
KIF3A-204ENST00000428744 PLAC8Q9NZF1 115 aa2.39□□□□□ -2.03
KIF3A-204ENST00000428744 TNRC6BQ9UPQ9 1833 aaKnown RBP2.39□□□□□ -2.03
KIF3A-204ENST00000428744 CFAP54Q96N23 3096 aa2.39□□□□□ -2.03
KIF3A-204ENST00000428744 CEP290O15078 2479 aa2.39□□□□□ -2.03
KIF3A-204ENST00000428744 GOLGA4Q13439 2230 aaKnown RBP2.38□□□□□ -2.03
KIF3A-204ENST00000428744 ITPR3Q14573 2671 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 ABCA12Q86UK0 2595 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 SPTBN4Q9H254 2564 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 ETDCA0A1B0GVM5 59 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 LRCOL1A6NCL2 159 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 STATHP02808 62 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 MSMBP08118 114 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 ROMO1P60602 79 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 NNATQ16517 81 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 CABIN1Q9Y6J0 2220 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 USP24Q9UPU5 2620 aa2.38□□□□□ -2.03
KIF3A-204ENST00000428744 REV3LO60673 3130 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 MUC22E2RYF6 1773 aaPredicted RBP2.37□□□□□ -2.03
KIF3A-204ENST00000428744 IGKV3D-11A0A0A0MRZ8 115 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 WT1-ASQ06250 92 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 KPRPQ5T749 579 aaPredicted RBP2.37□□□□□ -2.03
KIF3A-204ENST00000428744 SPINT4Q6UDR6 99 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 ZFAND2AQ8N6M9 145 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 MUC7Q8TAX7 377 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 SMIM11BQ8TCY0 68 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 COX7B2Q8TF08 81 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 WFDC10AQ9H1F0 79 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 DOPEY1Q5JWR5 2465 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 COL4A5P29400 1685 aa2.37□□□□□ -2.03
KIF3A-204ENST00000428744 CEP192Q8TEP8 1941 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms