RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 C10orf91Q5T1B1 145 aa5.9□□□□□ -1.46
TRIM39-208ENST00000428555 SERTAD4-AS1Q5TG53 156 aa5.9□□□□□ -1.46
TRIM39-208ENST00000428555 Q6ZN92 141 aa5.9□□□□□ -1.46
TRIM39-208ENST00000428555 LINC00173Q6ZV60 143 aa5.9□□□□□ -1.46
TRIM39-208ENST00000428555 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.46
TRIM39-208ENST00000428555 MRPL35Q9NZE8 188 aaKnown RBP5.9□□□□□ -1.46
TRIM39-208ENST00000428555 NDUFA1O15239 70 aa5.89□□□□□ -1.47
TRIM39-208ENST00000428555 PRR3P79522 188 aaKnown RBP5.89□□□□□ -1.47
TRIM39-208ENST00000428555 COX19Q49B96 90 aa5.89□□□□□ -1.47
TRIM39-208ENST00000428555 C9orf116Q5BN46 136 aaPredicted RBP5.89□□□□□ -1.47
TRIM39-208ENST00000428555 C2orf88Q9BSF0 95 aa5.89□□□□□ -1.47
TRIM39-208ENST00000428555 RPS10P5Q9NQ39 176 aa5.89□□□□□ -1.47
TRIM39-208ENST00000428555 FABP9Q0Z7S8 132 aa5.88□□□□□ -1.47
TRIM39-208ENST00000428555 C2orf82Q6UX34 121 aa5.88□□□□□ -1.47
TRIM39-208ENST00000428555 Q6ZRP5 223 aa5.88□□□□□ -1.47
TRIM39-208ENST00000428555 TOMM6Q96B49 74 aa5.88□□□□□ -1.47
TRIM39-208ENST00000428555 C6orf48Q9UBA6 75 aa5.88□□□□□ -1.47
TRIM39-208ENST00000428555 NPSP0C0P6 89 aa5.87□□□□□ -1.47
TRIM39-208ENST00000428555 LINC00614P0C842 121 aa5.87□□□□□ -1.47
TRIM39-208ENST00000428555 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
TRIM39-208ENST00000428555 SRSF9Q13242 221 aaKnown RBP eCLIP5.87□□□□□ -1.47
TRIM39-208ENST00000428555 PHF5AQ7RTV0 110 aaKnown RBP5.87□□□□□ -1.47
TRIM39-208ENST00000428555 BOD1L2Q8IYS8 172 aa5.87□□□□□ -1.47
TRIM39-208ENST00000428555 LINC01561Q8N1V8 128 aa5.87□□□□□ -1.47
TRIM39-208ENST00000428555 SCGB3A1Q96QR1 104 aa5.87□□□□□ -1.47
TRIM39-208ENST00000428555 MRPL18Q9H0U6 180 aaKnown RBP5.87□□□□□ -1.47
TRIM39-208ENST00000428555 CARHSP1Q9Y2V2 147 aaKnown RBP5.87□□□□□ -1.47
TRIM39-208ENST00000428555 TLX1NBP0CAT3 122 aa5.86□□□□□ -1.47
TRIM39-208ENST00000428555 RHEBQ15382 184 aa5.86□□□□□ -1.47
TRIM39-208ENST00000428555 GAGE2EQ4V326 116 aa5.86□□□□□ -1.47
TRIM39-208ENST00000428555 PAPPA-AS1Q5QFB9 102 aa5.86□□□□□ -1.47
TRIM39-208ENST00000428555 FAM19A3Q7Z5A8 133 aa5.86□□□□□ -1.47
TRIM39-208ENST00000428555 TIMM17AQ99595 171 aa5.86□□□□□ -1.47
TRIM39-208ENST00000428555 TOMM7Q9P0U1 55 aa5.86□□□□□ -1.47
TRIM39-208ENST00000428555 GAGE2DQ9UEU5 116 aa5.86□□□□□ -1.47
TRIM39-208ENST00000428555 FAM168BA1KXE4 195 aa5.85□□□□□ -1.47
TRIM39-208ENST00000428555 LINC01546A6NGU7 62 aa5.85□□□□□ -1.47
TRIM39-208ENST00000428555 PRSS2P07478 247 aa5.85□□□□□ -1.47
TRIM39-208ENST00000428555 CDKN2A-AS1Q9UH64 79 aa5.85□□□□□ -1.47
TRIM39-208ENST00000428555 TNXBP22105 4242 aa5.85□□□□□ -1.47
TRIM39-208ENST00000428555 TRBV30A0A0K0K1B3 111 aa5.84□□□□□ -1.47
TRIM39-208ENST00000428555 APOC3P02656 99 aa5.84□□□□□ -1.47
TRIM39-208ENST00000428555 MT-ND6P03923 174 aa5.84□□□□□ -1.47
TRIM39-208ENST00000428555 HERVK_113P63121 156 aa5.84□□□□□ -1.47
TRIM39-208ENST00000428555 SEC11AP67812 179 aa5.84□□□□□ -1.47
TRIM39-208ENST00000428555 SPINK6Q6UWN8 80 aa5.84□□□□□ -1.47
TRIM39-208ENST00000428555 FA2HQ7L5A8 372 aa5.84□□□□□ -1.47
TRIM39-208ENST00000428555 KRTAP7-1Q8IUC3 87 aa5.84□□□□□ -1.47
TRIM39-208ENST00000428555 PSORS1C2Q9UIG4 136 aa5.84□□□□□ -1.47
TRIM39-208ENST00000428555 NDUFC2-KCTD14E9PQ53 114 aa5.83□□□□□ -1.48
TRIM39-208ENST00000428555 CKS1BP61024 79 aa5.83□□□□□ -1.48
TRIM39-208ENST00000428555 HERV-K104P63124 156 aa5.83□□□□□ -1.48
TRIM39-208ENST00000428555 LINC01600Q96MT4 127 aa5.83□□□□□ -1.48
TRIM39-208ENST00000428555 MAP1LC3CQ9BXW4 147 aa5.83□□□□□ -1.48
TRIM39-208ENST00000428555 CST9LQ9H4G1 147 aa5.83□□□□□ -1.48
TRIM39-208ENST00000428555 TRAPPC1Q9Y5R8 145 aa5.83□□□□□ -1.48
TRIM39-208ENST00000428555 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
TRIM39-208ENST00000428555 LINC00587B1AMM8 73 aa5.82□□□□□ -1.48
TRIM39-208ENST00000428555 C1orf137Q5JT78 98 aa5.82□□□□□ -1.48
TRIM39-208ENST00000428555 C9orf129Q5T035 196 aaKnown RBP5.82□□□□□ -1.48
TRIM39-208ENST00000428555 FAM19A5Q7Z5A7 132 aaPredicted RBP5.82□□□□□ -1.48
TRIM39-208ENST00000428555 KRTAP11-1Q8IUC1 163 aa5.82□□□□□ -1.48
TRIM39-208ENST00000428555 Q8IZM0 81 aa5.82□□□□□ -1.48
TRIM39-208ENST00000428555 SMCO4Q9NRQ5 59 aa5.82□□□□□ -1.48
TRIM39-208ENST00000428555 A0A1B0GV72 72 aa5.81□□□□□ -1.48
TRIM39-208ENST00000428555 TINCRA0A1B0GVN0 87 aa5.81□□□□□ -1.48
TRIM39-208ENST00000428555 LINC01549A6NIU2 74 aa5.81□□□□□ -1.48
TRIM39-208ENST00000428555 PMVKQ15126 192 aa5.81□□□□□ -1.48
TRIM39-208ENST00000428555 REG3GQ6UW15 175 aa5.81□□□□□ -1.48
TRIM39-208ENST00000428555 URB1-AS1Q96HZ7 61 aa5.81□□□□□ -1.48
TRIM39-208ENST00000428555 PLA2G2DQ9UNK4 145 aa5.81□□□□□ -1.48
TRIM39-208ENST00000428555 SMIM1B2RUZ4 78 aa5.8□□□□□ -1.48
TRIM39-208ENST00000428555 M0QXV9 152 aa5.8□□□□□ -1.48
TRIM39-208ENST00000428555 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
TRIM39-208ENST00000428555 SVBPQ8N300 66 aa5.8□□□□□ -1.48
TRIM39-208ENST00000428555 C18orf32Q8TCD1 76 aa5.8□□□□□ -1.48
TRIM39-208ENST00000428555 IGLV5-45A0A087WSX0 123 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 A0A096LNJ9 63 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 F8VRH5 84 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 LCE2BO14633 110 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 SPINK8P0C7L1 97 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 NDUFA6P56556 154 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 PMCHL1Q16048 86 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 PDZD11Q5EBL8 140 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 COX7B2Q8TF08 81 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 XAGE1AQ9HD64 81 aa5.79□□□□□ -1.48
TRIM39-208ENST00000428555 IGLV7-43P04211 117 aa5.78□□□□□ -1.48
TRIM39-208ENST00000428555 HBDP02042 147 aa5.77□□□□□ -1.49
TRIM39-208ENST00000428555 RAB5BP61020 215 aa5.77□□□□□ -1.49
TRIM39-208ENST00000428555 UBE2BP63146 152 aa5.77□□□□□ -1.49
TRIM39-208ENST00000428555 YPEL4Q96NS1 127 aa5.77□□□□□ -1.49
TRIM39-208ENST00000428555 C12orf57Q99622 126 aa5.77□□□□□ -1.49
TRIM39-208ENST00000428555 C22orf24Q9Y442 160 aa5.77□□□□□ -1.49
TRIM39-208ENST00000428555 IGLC3P0DOY3 106 aa5.76□□□□□ -1.49
TRIM39-208ENST00000428555 CXCL5P42830 114 aa5.76□□□□□ -1.49
TRIM39-208ENST00000428555 H3BRM9 83 aa5.75□□□□□ -1.49
TRIM39-208ENST00000428555 BAGE3Q86Y29 109 aa5.75□□□□□ -1.49
TRIM39-208ENST00000428555 DIRC1Q969H9 104 aa5.75□□□□□ -1.49
TRIM39-208ENST00000428555 ATP5LO75964 103 aa5.74□□□□□ -1.49
TRIM39-208ENST00000428555 SCGB1A1P11684 91 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms