RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 FHL2Q14192 279 aa7.14□□□□□ -1.27
CLTCL1-202ENST00000427926 SDIM1Q6ZPB5 146 aa7.14□□□□□ -1.27
CLTCL1-202ENST00000427926 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
CLTCL1-202ENST00000427926 ATG2AQ2TAZ0 1938 aa7.14□□□□□ -1.27
CLTCL1-202ENST00000427926 LRRK2Q5S007 2527 aa7.14□□□□□ -1.27
CLTCL1-202ENST00000427926 RNF185Q96GF1 192 aa7.14□□□□□ -1.27
CLTCL1-202ENST00000427926 ZNF462Q96JM2 2506 aa7.14□□□□□ -1.27
CLTCL1-202ENST00000427926 CD164Q04900 197 aa7.13□□□□□ -1.27
CLTCL1-202ENST00000427926 Q6JHZ5 121 aa7.13□□□□□ -1.27
CLTCL1-202ENST00000427926 CRIP2P52943 208 aaPredicted RBP7.12□□□□□ -1.27
CLTCL1-202ENST00000427926 TP73-AS1Q9UF72 201 aa7.12□□□□□ -1.27
CLTCL1-202ENST00000427926 Q9BRP9 147 aa7.12□□□□□ -1.27
CLTCL1-202ENST00000427926 ZFYVE26Q68DK2 2539 aa7.12□□□□□ -1.27
CLTCL1-202ENST00000427926 GOLGB1Q14789 3259 aaKnown RBP7.12□□□□□ -1.27
CLTCL1-202ENST00000427926 C11orf21Q9P2W6 132 aa7.12□□□□□ -1.27
CLTCL1-202ENST00000427926 C9orf116Q5BN46 136 aaPredicted RBP7.11□□□□□ -1.27
CLTCL1-202ENST00000427926 KIAA1549Q9HCM3 1950 aa7.11□□□□□ -1.27
CLTCL1-202ENST00000427926 SMIM11BQ8TCY0 68 aa7.11□□□□□ -1.27
CLTCL1-202ENST00000427926 ZNF580Q9UK33 172 aa7.11□□□□□ -1.27
CLTCL1-202ENST00000427926 TRIAP1O43715 76 aa7.11□□□□□ -1.27
CLTCL1-202ENST00000427926 PLXNB1O43157 2135 aa7.11□□□□□ -1.27
CLTCL1-202ENST00000427926 CXCL6P80162 114 aa7.11□□□□□ -1.27
CLTCL1-202ENST00000427926 TRBV10-3A0A0K0K1G6 114 aa7.1□□□□□ -1.27
CLTCL1-202ENST00000427926 FAM19A3Q7Z5A8 133 aa7.1□□□□□ -1.27
CLTCL1-202ENST00000427926 POLR2KP53803 58 aaKnown RBP7.1□□□□□ -1.27
CLTCL1-202ENST00000427926 LINC00310P59036 64 aa7.09□□□□□ -1.27
CLTCL1-202ENST00000427926 CEP295Q9C0D2 2601 aa7.09□□□□□ -1.27
CLTCL1-202ENST00000427926 IGLV4-60A0A075B6I1 120 aa7.09□□□□□ -1.27
CLTCL1-202ENST00000427926 NRACQ8N912 160 aa7.08□□□□□ -1.28
CLTCL1-202ENST00000427926 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
CLTCL1-202ENST00000427926 MYO9AB2RTY4 2548 aa7.08□□□□□ -1.28
CLTCL1-202ENST00000427926 CPAMD8Q8IZJ3 1885 aa7.08□□□□□ -1.28
CLTCL1-202ENST00000427926 A6NED7 52 aa7.07□□□□□ -1.28
CLTCL1-202ENST00000427926 LINC00242Q5T6M2 205 aa7.07□□□□□ -1.28
CLTCL1-202ENST00000427926 Q8N2B8 174 aa7.07□□□□□ -1.28
CLTCL1-202ENST00000427926 C2orf91Q6ZV80 131 aa7.07□□□□□ -1.28
CLTCL1-202ENST00000427926 ARHGAP32A7KAX9 2087 aa7.07□□□□□ -1.28
CLTCL1-202ENST00000427926 SBSPONQ8IVN8 264 aa7.06□□□□□ -1.28
CLTCL1-202ENST00000427926 TANC2Q9HCD6 1990 aa7.06□□□□□ -1.28
CLTCL1-202ENST00000427926 SPINK1P00995 79 aa7.06□□□□□ -1.28
CLTCL1-202ENST00000427926 PRR4Q16378 134 aa7.06□□□□□ -1.28
CLTCL1-202ENST00000427926 FAM30AQ9NZY2 134 aa7.06□□□□□ -1.28
CLTCL1-202ENST00000427926 SPACA4Q8TDM5 124 aa7.05□□□□□ -1.28
CLTCL1-202ENST00000427926 CELA1Q9UNI1 258 aa7.05□□□□□ -1.28
CLTCL1-202ENST00000427926 CENPFP49454 3210 aa7.05□□□□□ -1.28
CLTCL1-202ENST00000427926 PRLHP81277 87 aa7.05□□□□□ -1.28
CLTCL1-202ENST00000427926 MAPKAPK5-AS1Q8N8E1 139 aa7.05□□□□□ -1.28
CLTCL1-202ENST00000427926 HCFC1P51610 2035 aa7.04□□□□□ -1.28
CLTCL1-202ENST00000427926 ABCA12Q86UK0 2595 aa7.04□□□□□ -1.28
CLTCL1-202ENST00000427926 C2CD3Q4AC94 2353 aa7.04□□□□□ -1.28
CLTCL1-202ENST00000427926 CRYGAP11844 174 aa7.04□□□□□ -1.28
CLTCL1-202ENST00000427926 ANKRD11Q6UB99 2663 aaPredicted RBP7.04□□□□□ -1.28
CLTCL1-202ENST00000427926 A0A1B0GUV1 79 aa7.03□□□□□ -1.28
CLTCL1-202ENST00000427926 TRAV7A0A075B6U4 112 aa7.03□□□□□ -1.28
CLTCL1-202ENST00000427926 Q6ZRU5 148 aa7.03□□□□□ -1.28
CLTCL1-202ENST00000427926 A0A087WSZ3 146 aa7.03□□□□□ -1.28
CLTCL1-202ENST00000427926 SMIM1B2RUZ4 78 aa7.03□□□□□ -1.28
CLTCL1-202ENST00000427926 NTM-AS1Q6ZSK4 140 aa7.03□□□□□ -1.28
CLTCL1-202ENST00000427926 RTL8CO15255 209 aa7.02□□□□□ -1.28
CLTCL1-202ENST00000427926 MRPS12O15235 138 aaKnown RBP7.02□□□□□ -1.29
CLTCL1-202ENST00000427926 C4orf26Q17RF5 130 aa7.02□□□□□ -1.29
CLTCL1-202ENST00000427926 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
CLTCL1-202ENST00000427926 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
CLTCL1-202ENST00000427926 TRBV7-7A0A0K0K1E9 115 aa7.01□□□□□ -1.29
CLTCL1-202ENST00000427926 NBDYA0A0U1RRE5 68 aa7.01□□□□□ -1.29
CLTCL1-202ENST00000427926 URB1-AS1Q96HZ7 61 aa7.01□□□□□ -1.29
CLTCL1-202ENST00000427926 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
CLTCL1-202ENST00000427926 C22orf24Q9Y442 160 aa7.01□□□□□ -1.29
CLTCL1-202ENST00000427926 TRBV7-6A0A0J9YX20 115 aa7□□□□□ -1.29
CLTCL1-202ENST00000427926 LINC00315P59091 139 aa7□□□□□ -1.29
CLTCL1-202ENST00000427926 SMCR5Q8TEV8 140 aa7□□□□□ -1.29
CLTCL1-202ENST00000427926 LINC01547P58512 204 aaPredicted RBP6.99□□□□□ -1.29
CLTCL1-202ENST00000427926 LINC00208Q96KT6 92 aa6.99□□□□□ -1.29
CLTCL1-202ENST00000427926 Q8N814 137 aa6.99□□□□□ -1.29
CLTCL1-202ENST00000427926 SNURFQ9Y675 71 aa6.99□□□□□ -1.29
CLTCL1-202ENST00000427926 TYMSOSQ8TAI1 123 aa6.99□□□□□ -1.29
CLTCL1-202ENST00000427926 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
CLTCL1-202ENST00000427926 Q6ZRP5 223 aa6.99□□□□□ -1.29
CLTCL1-202ENST00000427926 GAS8-AS1O95177 125 aa6.98□□□□□ -1.29
CLTCL1-202ENST00000427926 IGKV2D-30A0A075B6S6 120 aa6.98□□□□□ -1.29
CLTCL1-202ENST00000427926 IGIPA6NJ69 53 aa6.98□□□□□ -1.29
CLTCL1-202ENST00000427926 IGKV2-30P06310 120 aa6.98□□□□□ -1.29
CLTCL1-202ENST00000427926 EML5Q05BV3 1969 aa6.98□□□□□ -1.29
CLTCL1-202ENST00000427926 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
CLTCL1-202ENST00000427926 ADAMTS20P59510 1910 aa6.97□□□□□ -1.29
CLTCL1-202ENST00000427926 hDV103S1A0JD37 113 aa6.97□□□□□ -1.29
CLTCL1-202ENST00000427926 MOBPQ13875 183 aa6.97□□□□□ -1.29
CLTCL1-202ENST00000427926 SPTBN4Q9H254 2564 aa6.97□□□□□ -1.29
CLTCL1-202ENST00000427926 EXPH5Q8NEV8 1989 aa6.97□□□□□ -1.29
CLTCL1-202ENST00000427926 RAI1Q7Z5J4 1906 aaPredicted RBP6.97□□□□□ -1.29
CLTCL1-202ENST00000427926 FN1P02751 2386 aaKnown RBP6.96□□□□□ -1.29
CLTCL1-202ENST00000427926 TLN2Q9Y4G6 2542 aa6.96□□□□□ -1.3
CLTCL1-202ENST00000427926 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
CLTCL1-202ENST00000427926 DEFB116Q30KQ4 102 aa6.96□□□□□ -1.3
CLTCL1-202ENST00000427926 PCOTHQ58A44 107 aa6.96□□□□□ -1.3
CLTCL1-202ENST00000427926 Q6ZSN1 163 aa6.96□□□□□ -1.3
CLTCL1-202ENST00000427926 KIF25-AS1Q9Y6Z4 181 aa6.96□□□□□ -1.3
CLTCL1-202ENST00000427926 FASNP49327 2511 aaKnown RBP6.96□□□□□ -1.3
CLTCL1-202ENST00000427926 LINC01561Q8N1V8 128 aa6.96□□□□□ -1.3
CLTCL1-202ENST00000427926 COX8CQ7Z4L0 72 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms