RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 KRTAP1-4P0C5Y4 121 aa9.67□□□□□ -0.86
HLA-DQB2-230ENST00000427449 HERVK_113P63121 156 aa9.66□□□□□ -0.86
HLA-DQB2-230ENST00000427449 RHEBQ15382 184 aa9.66□□□□□ -0.86
HLA-DQB2-230ENST00000427449 C1orf137Q5JT78 98 aa9.66□□□□□ -0.86
HLA-DQB2-230ENST00000427449 YPEL4Q96NS1 127 aa9.66□□□□□ -0.86
HLA-DQB2-230ENST00000427449 MRPL18Q9H0U6 180 aaKnown RBP9.66□□□□□ -0.86
HLA-DQB2-230ENST00000427449 M0QXV9 152 aa9.65□□□□□ -0.86
HLA-DQB2-230ENST00000427449 MT-ND6P03923 174 aa9.65□□□□□ -0.86
HLA-DQB2-230ENST00000427449 REG3GQ6UW15 175 aa9.65□□□□□ -0.86
HLA-DQB2-230ENST00000427449 TINCRA0A1B0GVN0 87 aa9.64□□□□□ -0.87
HLA-DQB2-230ENST00000427449 SCGB3A1Q96QR1 104 aa9.64□□□□□ -0.87
HLA-DQB2-230ENST00000427449 CST9LQ9H4G1 147 aa9.64□□□□□ -0.87
HLA-DQB2-230ENST00000427449 LPAP08519 4548 aa9.64□□□□□ -0.87
HLA-DQB2-230ENST00000427449 C18orf32Q8TCD1 76 aa9.63□□□□□ -0.87
HLA-DQB2-230ENST00000427449 TOMM7Q9P0U1 55 aa9.63□□□□□ -0.87
HLA-DQB2-230ENST00000427449 H0Y9J4 135 aa9.62□□□□□ -0.87
HLA-DQB2-230ENST00000427449 S100PP25815 95 aa9.62□□□□□ -0.87
HLA-DQB2-230ENST00000427449 COX19Q49B96 90 aa9.62□□□□□ -0.87
HLA-DQB2-230ENST00000427449 PAPPA-AS1Q5QFB9 102 aa9.62□□□□□ -0.87
HLA-DQB2-230ENST00000427449 LINC00469Q8N7U9 141 aa9.62□□□□□ -0.87
HLA-DQB2-230ENST00000427449 RPS10P5Q9NQ39 176 aa9.62□□□□□ -0.87
HLA-DQB2-230ENST00000427449 F8VRH5 84 aa9.61□□□□□ -0.87
HLA-DQB2-230ENST00000427449 SEC11AP67812 179 aa9.61□□□□□ -0.87
HLA-DQB2-230ENST00000427449 PACRGQ96M98 296 aaPredicted RBP9.61□□□□□ -0.87
HLA-DQB2-230ENST00000427449 XAGE1AQ9HD64 81 aa9.61□□□□□ -0.87
HLA-DQB2-230ENST00000427449 G0S2P27469 103 aa9.6□□□□□ -0.87
HLA-DQB2-230ENST00000427449 PDZD11Q5EBL8 140 aa9.6□□□□□ -0.87
HLA-DQB2-230ENST00000427449 IGLV5-39A0A0G2JS06 123 aa9.59□□□□□ -0.87
HLA-DQB2-230ENST00000427449 IGLC3P0DOY3 106 aa9.59□□□□□ -0.87
HLA-DQB2-230ENST00000427449 FABP9Q0Z7S8 132 aa9.59□□□□□ -0.87
HLA-DQB2-230ENST00000427449 PMVKQ15126 192 aa9.59□□□□□ -0.87
HLA-DQB2-230ENST00000427449 GEMIN7Q9H840 131 aaKnown RBP9.59□□□□□ -0.87
HLA-DQB2-230ENST00000427449 PRSS2P07478 247 aa9.58□□□□□ -0.88
HLA-DQB2-230ENST00000427449 SPINK8P0C7L1 97 aa9.58□□□□□ -0.88
HLA-DQB2-230ENST00000427449 CXCL5P42830 114 aa9.58□□□□□ -0.88
HLA-DQB2-230ENST00000427449 CKS1BP61024 79 aa9.58□□□□□ -0.88
HLA-DQB2-230ENST00000427449 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
HLA-DQB2-230ENST00000427449 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
HLA-DQB2-230ENST00000427449 COX7B2Q8TF08 81 aa9.58□□□□□ -0.88
HLA-DQB2-230ENST00000427449 C22orf24Q9Y442 160 aa9.58□□□□□ -0.88
HLA-DQB2-230ENST00000427449 RNF213Q63HN8 5207 aa9.57□□□□□ -0.88
HLA-DQB2-230ENST00000427449 LINC01549A6NIU2 74 aa9.57□□□□□ -0.88
HLA-DQB2-230ENST00000427449 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
HLA-DQB2-230ENST00000427449 PMCHL1Q16048 86 aa9.56□□□□□ -0.88
HLA-DQB2-230ENST00000427449 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
HLA-DQB2-230ENST00000427449 DIRC1Q969H9 104 aa9.56□□□□□ -0.88
HLA-DQB2-230ENST00000427449 TP73-AS1Q9UF72 201 aa9.56□□□□□ -0.88
HLA-DQB2-230ENST00000427449 IGLV5-37A0A075B6J1 123 aa9.55□□□□□ -0.88
HLA-DQB2-230ENST00000427449 Q8NDZ9 215 aa9.54□□□□□ -0.88
HLA-DQB2-230ENST00000427449 APOC3P02656 99 aa9.53□□□□□ -0.88
HLA-DQB2-230ENST00000427449 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
HLA-DQB2-230ENST00000427449 TRAPPC1Q9Y5R8 145 aa9.53□□□□□ -0.88
HLA-DQB2-230ENST00000427449 C11orf86A6NJI1 115 aa9.52□□□□□ -0.89
HLA-DQB2-230ENST00000427449 HBDP02042 147 aa9.52□□□□□ -0.89
HLA-DQB2-230ENST00000427449 LINC00614P0C842 121 aa9.52□□□□□ -0.89
HLA-DQB2-230ENST00000427449 UBE2BP63146 152 aa9.52□□□□□ -0.89
HLA-DQB2-230ENST00000427449 SMCO4Q9NRQ5 59 aa9.52□□□□□ -0.89
HLA-DQB2-230ENST00000427449 MRPL55Q7Z7F7 128 aaKnown RBP9.51□□□□□ -0.89
HLA-DQB2-230ENST00000427449 ZNF861PO60384 105 aa9.5□□□□□ -0.89
HLA-DQB2-230ENST00000427449 SVBPQ8N300 66 aa9.5□□□□□ -0.89
HLA-DQB2-230ENST00000427449 LINC00167Q96N53 147 aa9.5□□□□□ -0.89
HLA-DQB2-230ENST00000427449 IGLV1-50A0A075B6I6 118 aa9.49□□□□□ -0.89
HLA-DQB2-230ENST00000427449 NUPR1O60356 82 aa9.49□□□□□ -0.89
HLA-DQB2-230ENST00000427449 SCO1O75880 301 aa9.49□□□□□ -0.89
HLA-DQB2-230ENST00000427449 SNAPINO95295 136 aa9.49□□□□□ -0.89
HLA-DQB2-230ENST00000427449 LINC00310P59036 64 aa9.49□□□□□ -0.89
HLA-DQB2-230ENST00000427449 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
HLA-DQB2-230ENST00000427449 VPREB1P12018 145 aa9.47□□□□□ -0.89
HLA-DQB2-230ENST00000427449 A0A087X002 238 aa9.46□□□□□ -0.9
HLA-DQB2-230ENST00000427449 BCE1O60756 84 aa9.46□□□□□ -0.9
HLA-DQB2-230ENST00000427449 CBLN2Q8IUK8 224 aa9.46□□□□□ -0.9
HLA-DQB2-230ENST00000427449 RPL37AP8A6NKH3 93 aa9.45□□□□□ -0.9
HLA-DQB2-230ENST00000427449 RAB5BP61020 215 aa9.45□□□□□ -0.9
HLA-DQB2-230ENST00000427449 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
HLA-DQB2-230ENST00000427449 H3BRM9 83 aa9.44□□□□□ -0.9
HLA-DQB2-230ENST00000427449 SND1-IT1Q9HBX3 110 aa9.44□□□□□ -0.9
HLA-DQB2-230ENST00000427449 ATP5LO75964 103 aa9.43□□□□□ -0.9
HLA-DQB2-230ENST00000427449 ERG28Q9UKR5 140 aa9.43□□□□□ -0.9
HLA-DQB2-230ENST00000427449 GAGE10A6NGK3 116 aa9.42□□□□□ -0.9
HLA-DQB2-230ENST00000427449 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
HLA-DQB2-230ENST00000427449 TRAV12-1A0A0B4J245 112 aa9.41□□□□□ -0.9
HLA-DQB2-230ENST00000427449 TMEM223A0PJW6 202 aa9.41□□□□□ -0.9
HLA-DQB2-230ENST00000427449 PFN2P35080 140 aa9.41□□□□□ -0.9
HLA-DQB2-230ENST00000427449 NDUFA6P56556 154 aa9.41□□□□□ -0.9
HLA-DQB2-230ENST00000427449 KRTAP13-2Q52LG2 175 aa9.41□□□□□ -0.9
HLA-DQB2-230ENST00000427449 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
HLA-DQB2-230ENST00000427449 NDUFA5Q16718 116 aa9.4□□□□□ -0.9
HLA-DQB2-230ENST00000427449 COX17Q14061 63 aa9.39□□□□□ -0.91
HLA-DQB2-230ENST00000427449 IFI27L1Q96BM0 104 aa9.39□□□□□ -0.91
HLA-DQB2-230ENST00000427449 CHTOPQ9Y3Y2 248 aaKnown RBP9.39□□□□□ -0.91
HLA-DQB2-230ENST00000427449 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
HLA-DQB2-230ENST00000427449 IGKV2-28A0A075B6P5 120 aa9.37□□□□□ -0.91
HLA-DQB2-230ENST00000427449 TMEM238C9JI98 176 aa9.37□□□□□ -0.91
HLA-DQB2-230ENST00000427449 M0R378 163 aa9.37□□□□□ -0.91
HLA-DQB2-230ENST00000427449 IGKV2D-28P01615 120 aa9.37□□□□□ -0.91
HLA-DQB2-230ENST00000427449 RPL13AP40429 203 aaKnown RBP9.37□□□□□ -0.91
HLA-DQB2-230ENST00000427449 RPL28P46779 137 aaKnown RBP9.37□□□□□ -0.91
HLA-DQB2-230ENST00000427449 FAM19A2Q8N3H0 131 aa9.37□□□□□ -0.91
HLA-DQB2-230ENST00000427449 ANAPC11Q9NYG5 84 aa9.37□□□□□ -0.91
HLA-DQB2-230ENST00000427449 TRGC2P03986 189 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms