RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 LINC01600Q96MT4 127 aa11.28□□□□□ -0.6
SMARCAL1-205ENST00000425815 CST9LQ9H4G1 147 aa11.28□□□□□ -0.6
SMARCAL1-205ENST00000425815 TOMM7Q9P0U1 55 aa11.28□□□□□ -0.6
SMARCAL1-205ENST00000425815 A0A096LNJ9 63 aa11.27□□□□□ -0.61
SMARCAL1-205ENST00000425815 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.61
SMARCAL1-205ENST00000425815 C6orf226Q5I0X4 101 aa11.27□□□□□ -0.61
SMARCAL1-205ENST00000425815 C9orf129Q5T035 196 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-205ENST00000425815 FA2HQ7L5A8 372 aa11.27□□□□□ -0.61
SMARCAL1-205ENST00000425815 GEMIN7Q9H840 131 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-205ENST00000425815 TRAPPC1Q9Y5R8 145 aa11.27□□□□□ -0.61
SMARCAL1-205ENST00000425815 TINCRA0A1B0GVN0 87 aa11.26□□□□□ -0.61
SMARCAL1-205ENST00000425815 LINC01549A6NIU2 74 aa11.26□□□□□ -0.61
SMARCAL1-205ENST00000425815 PRSS2P07478 247 aa11.26□□□□□ -0.61
SMARCAL1-205ENST00000425815 PACRGQ96M98 296 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-205ENST00000425815 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
SMARCAL1-205ENST00000425815 SVBPQ8N300 66 aa11.25□□□□□ -0.61
SMARCAL1-205ENST00000425815 C18orf32Q8TCD1 76 aa11.25□□□□□ -0.61
SMARCAL1-205ENST00000425815 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
SMARCAL1-205ENST00000425815 SMIM1B2RUZ4 78 aa11.24□□□□□ -0.61
SMARCAL1-205ENST00000425815 SNAPINO95295 136 aa11.24□□□□□ -0.61
SMARCAL1-205ENST00000425815 CKS1BP61024 79 aa11.24□□□□□ -0.61
SMARCAL1-205ENST00000425815 FAM19A5Q7Z5A7 132 aaPredicted RBP11.24□□□□□ -0.61
SMARCAL1-205ENST00000425815 LINC00469Q8N7U9 141 aa11.24□□□□□ -0.61
SMARCAL1-205ENST00000425815 SMCO4Q9NRQ5 59 aa11.24□□□□□ -0.61
SMARCAL1-205ENST00000425815 LINC00614P0C842 121 aa11.23□□□□□ -0.61
SMARCAL1-205ENST00000425815 PMVKQ15126 192 aa11.23□□□□□ -0.61
SMARCAL1-205ENST00000425815 KRTAP10-8P60410 259 aa11.22□□□□□ -0.61
SMARCAL1-205ENST00000425815 C1orf137Q5JT78 98 aa11.22□□□□□ -0.61
SMARCAL1-205ENST00000425815 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.61
SMARCAL1-205ENST00000425815 F8VRH5 84 aa11.2□□□□□ -0.62
SMARCAL1-205ENST00000425815 PMCHL1Q16048 86 aa11.2□□□□□ -0.62
SMARCAL1-205ENST00000425815 NDUFA5Q16718 116 aa11.2□□□□□ -0.62
SMARCAL1-205ENST00000425815 SPINK8P0C7L1 97 aa11.19□□□□□ -0.62
SMARCAL1-205ENST00000425815 ODF1Q14990 250 aa11.19□□□□□ -0.62
SMARCAL1-205ENST00000425815 M0QXV9 152 aa11.18□□□□□ -0.62
SMARCAL1-205ENST00000425815 REG3GQ6UW15 175 aa11.18□□□□□ -0.62
SMARCAL1-205ENST00000425815 COX7B2Q8TF08 81 aa11.18□□□□□ -0.62
SMARCAL1-205ENST00000425815 UBR4Q5T4S7 5183 aa11.17□□□□□ -0.62
SMARCAL1-205ENST00000425815 IGLV7-43P04211 117 aa11.17□□□□□ -0.62
SMARCAL1-205ENST00000425815 IGLC3P0DOY3 106 aa11.17□□□□□ -0.62
SMARCAL1-205ENST00000425815 CXCL5P42830 114 aa11.17□□□□□ -0.62
SMARCAL1-205ENST00000425815 XAGE1AQ9HD64 81 aa11.17□□□□□ -0.62
SMARCAL1-205ENST00000425815 PLA2G2DQ9UNK4 145 aa11.17□□□□□ -0.62
SMARCAL1-205ENST00000425815 HBDP02042 147 aa11.16□□□□□ -0.62
SMARCAL1-205ENST00000425815 C22orf24Q9Y442 160 aa11.15□□□□□ -0.62
SMARCAL1-205ENST00000425815 NDUFA6P56556 154 aa11.14□□□□□ -0.63
SMARCAL1-205ENST00000425815 IGLV5-39A0A0G2JS06 123 aa11.13□□□□□ -0.63
SMARCAL1-205ENST00000425815 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-205ENST00000425815 RAB5BP61020 215 aa11.13□□□□□ -0.63
SMARCAL1-205ENST00000425815 UBE2BP63146 152 aa11.12□□□□□ -0.63
SMARCAL1-205ENST00000425815 CBLN2Q8IUK8 224 aa11.12□□□□□ -0.63
SMARCAL1-205ENST00000425815 H3BRM9 83 aa11.11□□□□□ -0.63
SMARCAL1-205ENST00000425815 ATP5LO75964 103 aa11.1□□□□□ -0.63
SMARCAL1-205ENST00000425815 BAGE3Q86Y29 109 aa11.1□□□□□ -0.63
SMARCAL1-205ENST00000425815 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
SMARCAL1-205ENST00000425815 SLC7A5P1Q8MH63 180 aa11.09□□□□□ -0.63
SMARCAL1-205ENST00000425815 DIRC1Q969H9 104 aa11.09□□□□□ -0.63
SMARCAL1-205ENST00000425815 H0Y9J4 135 aa11.08□□□□□ -0.64
SMARCAL1-205ENST00000425815 CHCHD1Q96BP2 118 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-205ENST00000425815 TP73-AS1Q9UF72 201 aa11.07□□□□□ -0.64
SMARCAL1-205ENST00000425815 LBHQ53QV2 105 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-205ENST00000425815 KRTAP1-4P0C5Y4 121 aa11.05□□□□□ -0.64
SMARCAL1-205ENST00000425815 MRPL55Q7Z7F7 128 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-205ENST00000425815 LINC00167Q96N53 147 aa11.04□□□□□ -0.64
SMARCAL1-205ENST00000425815 CHTOPQ9Y3Y2 248 aaKnown RBP11.04□□□□□ -0.64
SMARCAL1-205ENST00000425815 IGLV5-37A0A075B6J1 123 aa11.03□□□□□ -0.64
SMARCAL1-205ENST00000425815 TRAV12-1A0A0B4J245 112 aa11.03□□□□□ -0.64
SMARCAL1-205ENST00000425815 TRGC2P03986 189 aa11.03□□□□□ -0.64
SMARCAL1-205ENST00000425815 TMEM170BQ5T4T1 132 aa11.03□□□□□ -0.64
SMARCAL1-205ENST00000425815 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
SMARCAL1-205ENST00000425815 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
SMARCAL1-205ENST00000425815 LRP2P98164 4655 aa11.02□□□□□ -0.64
SMARCAL1-205ENST00000425815 ZNF861PO60384 105 aa11.02□□□□□ -0.65
SMARCAL1-205ENST00000425815 PFN2P35080 140 aa11.02□□□□□ -0.65
SMARCAL1-205ENST00000425815 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.65
SMARCAL1-205ENST00000425815 RPL37AP8A6NKH3 93 aa11.01□□□□□ -0.65
SMARCAL1-205ENST00000425815 NUPR1O60356 82 aa11.01□□□□□ -0.65
SMARCAL1-205ENST00000425815 LINC00310P59036 64 aa11.01□□□□□ -0.65
SMARCAL1-205ENST00000425815 TMEM223A0PJW6 202 aa11□□□□□ -0.65
SMARCAL1-205ENST00000425815 ZNF625Q96I27 306 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-205ENST00000425815 ERG28Q9UKR5 140 aa11□□□□□ -0.65
SMARCAL1-205ENST00000425815 GAGE10A6NGK3 116 aa10.99□□□□□ -0.65
SMARCAL1-205ENST00000425815 COLCA2A8K830 154 aa10.99□□□□□ -0.65
SMARCAL1-205ENST00000425815 SCO1O75880 301 aa10.99□□□□□ -0.65
SMARCAL1-205ENST00000425815 SND1-IT1Q9HBX3 110 aa10.99□□□□□ -0.65
SMARCAL1-205ENST00000425815 Q8NDZ9 215 aa10.98□□□□□ -0.65
SMARCAL1-205ENST00000425815 BCE1O60756 84 aa10.97□□□□□ -0.65
SMARCAL1-205ENST00000425815 HSBP1O75506 76 aa10.97□□□□□ -0.65
SMARCAL1-205ENST00000425815 COX17Q14061 63 aa10.97□□□□□ -0.65
SMARCAL1-205ENST00000425815 VPREB1P12018 145 aa10.96□□□□□ -0.65
SMARCAL1-205ENST00000425815 SERF1AO75920 110 aa10.95□□□□□ -0.66
SMARCAL1-205ENST00000425815 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
SMARCAL1-205ENST00000425815 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
SMARCAL1-205ENST00000425815 SFTA2Q6UW10 78 aa10.93□□□□□ -0.66
SMARCAL1-205ENST00000425815 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
SMARCAL1-205ENST00000425815 IGKV2-28A0A075B6P5 120 aa10.91□□□□□ -0.66
SMARCAL1-205ENST00000425815 LEPROTL1O95214 131 aa10.91□□□□□ -0.66
SMARCAL1-205ENST00000425815 IGKV2D-28P01615 120 aa10.91□□□□□ -0.66
SMARCAL1-205ENST00000425815 RPL28P46779 137 aaKnown RBP10.91□□□□□ -0.66
SMARCAL1-205ENST00000425815 A0A0U1RRA0 63 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms