RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 LINC00242Q5T6M2 205 aa9.22□□□□□ -0.93
COL12A1-205ENST00000425443 NTM-AS1Q6ZSK4 140 aa9.22□□□□□ -0.93
COL12A1-205ENST00000425443 PDZD2O15018 2839 aa9.22□□□□□ -0.93
COL12A1-205ENST00000425443 SS18Q15532 418 aa9.21□□□□□ -0.93
COL12A1-205ENST00000425443 COX6CP09669 75 aa9.21□□□□□ -0.94
COL12A1-205ENST00000425443 SOSTDC1Q6X4U4 206 aa9.21□□□□□ -0.94
COL12A1-205ENST00000425443 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
COL12A1-205ENST00000425443 IGLV5-45A0A087WSX0 123 aa9.2□□□□□ -0.94
COL12A1-205ENST00000425443 SMCR5Q8TEV8 140 aa9.2□□□□□ -0.94
COL12A1-205ENST00000425443 NDUFA1O15239 70 aa9.19□□□□□ -0.94
COL12A1-205ENST00000425443 GIG44P09565 113 aaPredicted RBP9.19□□□□□ -0.94
COL12A1-205ENST00000425443 PMAIP1Q13794 54 aa9.19□□□□□ -0.94
COL12A1-205ENST00000425443 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
COL12A1-205ENST00000425443 LST1O00453 97 aa9.19□□□□□ -0.94
COL12A1-205ENST00000425443 C11orf68Q9H3H3 251 aaKnown RBP9.19□□□□□ -0.94
COL12A1-205ENST00000425443 IMUPQ9GZP8 106 aa9.18□□□□□ -0.94
COL12A1-205ENST00000425443 ATOX1O00244 68 aa9.18□□□□□ -0.94
COL12A1-205ENST00000425443 DEFB130BP0DP73 79 aa9.18□□□□□ -0.94
COL12A1-205ENST00000425443 DEFB130AP0DP74 79 aa9.18□□□□□ -0.94
COL12A1-205ENST00000425443 LINC00308Q8TCZ7 52 aa9.18□□□□□ -0.94
COL12A1-205ENST00000425443 IGLV5-39A0A0G2JS06 123 aa9.17□□□□□ -0.94
COL12A1-205ENST00000425443 SMIM1B2RUZ4 78 aa9.17□□□□□ -0.94
COL12A1-205ENST00000425443 A0A096LPF7 62 aa9.16□□□□□ -0.94
COL12A1-205ENST00000425443 C19orf73Q9NVV2 129 aa9.16□□□□□ -0.94
COL12A1-205ENST00000425443 TIMM17BO60830 172 aa9.16□□□□□ -0.94
COL12A1-205ENST00000425443 ATP5G1P05496 136 aa9.16□□□□□ -0.94
COL12A1-205ENST00000425443 CDC42SE2Q9NRR3 84 aa9.16□□□□□ -0.94
COL12A1-205ENST00000425443 ATRQ13535 2644 aa9.15□□□□□ -0.94
COL12A1-205ENST00000425443 FHL2Q14192 279 aa9.15□□□□□ -0.94
COL12A1-205ENST00000425443 TRBV6-4A0A1B0GX49 114 aa9.15□□□□□ -0.95
COL12A1-205ENST00000425443 PLAC8L1A1L4L8 177 aa9.15□□□□□ -0.95
COL12A1-205ENST00000425443 LINC00474Q9P2X8 69 aa9.15□□□□□ -0.95
COL12A1-205ENST00000425443 S100A7L2Q5SY68 101 aa9.14□□□□□ -0.95
COL12A1-205ENST00000425443 NDUFC2O95298 119 aa9.14□□□□□ -0.95
COL12A1-205ENST00000425443 CLPSL2Q6UWE3 100 aa9.14□□□□□ -0.95
COL12A1-205ENST00000425443 H3BT86 120 aa9.14□□□□□ -0.95
COL12A1-205ENST00000425443 SDIM1Q6ZPB5 146 aa9.14□□□□□ -0.95
COL12A1-205ENST00000425443 CSNK1G2-AS1Q8NCQ2 148 aa9.14□□□□□ -0.95
COL12A1-205ENST00000425443 LINC00643Q86TS7 51 aa9.13□□□□□ -0.95
COL12A1-205ENST00000425443 C5orf38Q86SI9 138 aa9.13□□□□□ -0.95
COL12A1-205ENST00000425443 OVOL2Q9BRP0 275 aa9.13□□□□□ -0.95
COL12A1-205ENST00000425443 LY6G6DO95868 133 aa9.12□□□□□ -0.95
COL12A1-205ENST00000425443 FP248Q71RG6 208 aaPredicted RBP9.12□□□□□ -0.95
COL12A1-205ENST00000425443 SERP2Q8N6R1 65 aa9.12□□□□□ -0.95
COL12A1-205ENST00000425443 FAM218AQ96MZ4 157 aa9.12□□□□□ -0.95
COL12A1-205ENST00000425443 IGLV4-60A0A075B6I1 120 aa9.12□□□□□ -0.95
COL12A1-205ENST00000425443 A0A087WVE0 104 aa9.12□□□□□ -0.95
COL12A1-205ENST00000425443 FAM240AA0A1B0GVK7 77 aa9.12□□□□□ -0.95
COL12A1-205ENST00000425443 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
COL12A1-205ENST00000425443 UPK3BQ9BT76 320 aa9.11□□□□□ -0.95
COL12A1-205ENST00000425443 C22orf24Q9Y442 160 aa9.11□□□□□ -0.95
COL12A1-205ENST00000425443 DEFB121Q5J5C9 76 aa9.11□□□□□ -0.95
COL12A1-205ENST00000425443 Q9HAA7 133 aa9.11□□□□□ -0.95
COL12A1-205ENST00000425443 IGKV3D-7A0A0C4DH55 119 aa9.1□□□□□ -0.95
COL12A1-205ENST00000425443 LINC00158P58513 81 aa9.1□□□□□ -0.95
COL12A1-205ENST00000425443 KRTAP10-3P60369 221 aa9.1□□□□□ -0.95
COL12A1-205ENST00000425443 FAM19A3Q7Z5A8 133 aa9.1□□□□□ -0.95
COL12A1-205ENST00000425443 C11orf45Q8TAV5 145 aa9.1□□□□□ -0.95
COL12A1-205ENST00000425443 COPS9Q8WXC6 57 aa9.1□□□□□ -0.95
COL12A1-205ENST00000425443 DEFB4AO15263 64 aa9.1□□□□□ -0.95
COL12A1-205ENST00000425443 RPL18AQ02543 176 aaKnown RBP9.1□□□□□ -0.95
COL12A1-205ENST00000425443 MPLKIPQ8TAP9 179 aa9.1□□□□□ -0.95
COL12A1-205ENST00000425443 TENM1Q9UKZ4 2725 aa9.1□□□□□ -0.95
COL12A1-205ENST00000425443 TRBV6-8A0A0A6YYG3 113 aa9.09□□□□□ -0.95
COL12A1-205ENST00000425443 MIR7-3HGQ8N6C7 128 aa9.09□□□□□ -0.95
COL12A1-205ENST00000425443 COX7A2LO14548 114 aa9.09□□□□□ -0.95
COL12A1-205ENST00000425443 INAFM1C9JVW0 142 aa9.08□□□□□ -0.96
COL12A1-205ENST00000425443 GYPEP15421 78 aa9.08□□□□□ -0.96
COL12A1-205ENST00000425443 XCL1P47992 114 aa9.07□□□□□ -0.96
COL12A1-205ENST00000425443 C20orf197Q8N268 126 aa9.07□□□□□ -0.96
COL12A1-205ENST00000425443 OTOGQ6ZRI0 2925 aa9.07□□□□□ -0.96
COL12A1-205ENST00000425443 CD164Q04900 197 aa9.07□□□□□ -0.96
COL12A1-205ENST00000425443 COX7B2Q8TF08 81 aa9.06□□□□□ -0.96
COL12A1-205ENST00000425443 ANK3Q12955 4377 aaKnown RBP9.06□□□□□ -0.96
COL12A1-205ENST00000425443 SERP1Q9Y6X1 66 aa9.06□□□□□ -0.96
COL12A1-205ENST00000425443 SMIM26A0A096LP01 95 aa9.05□□□□□ -0.96
COL12A1-205ENST00000425443 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
COL12A1-205ENST00000425443 IGKV2-28A0A075B6P5 120 aa9.05□□□□□ -0.96
COL12A1-205ENST00000425443 IGKV2D-28P01615 120 aa9.05□□□□□ -0.96
COL12A1-205ENST00000425443 C9orf66Q5T8R8 295 aa9.05□□□□□ -0.96
COL12A1-205ENST00000425443 KMT2BQ9UMN6 2715 aaPredicted RBP9.05□□□□□ -0.96
COL12A1-205ENST00000425443 CRPP02741 224 aa9.05□□□□□ -0.96
COL12A1-205ENST00000425443 DEFB135Q30KP9 77 aa9.05□□□□□ -0.96
COL12A1-205ENST00000425443 SND1-IT1Q9HBX3 110 aa9.05□□□□□ -0.96
COL12A1-205ENST00000425443 TEP1Q99973 2627 aaKnown RBP9.04□□□□□ -0.96
COL12A1-205ENST00000425443 TRRAPQ9Y4A5 3859 aa9.04□□□□□ -0.96
COL12A1-205ENST00000425443 PAX4O43316 350 aa9.04□□□□□ -0.96
COL12A1-205ENST00000425443 C9orf129Q5T035 196 aaKnown RBP9.04□□□□□ -0.96
COL12A1-205ENST00000425443 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
COL12A1-205ENST00000425443 MRPL55Q7Z7F7 128 aaKnown RBP9.03□□□□□ -0.96
COL12A1-205ENST00000425443 IGLV10-54A0A075B6I4 117 aa9.03□□□□□ -0.96
COL12A1-205ENST00000425443 H3BS24 57 aa9.03□□□□□ -0.96
COL12A1-205ENST00000425443 BAALC-AS2P0C853 105 aa9.03□□□□□ -0.96
COL12A1-205ENST00000425443 PRO0255Q9UI72 69 aa9.03□□□□□ -0.96
COL12A1-205ENST00000425443 USP17L23D6RBM5 183 aa9.02□□□□□ -0.96
COL12A1-205ENST00000425443 CXCL5P42830 114 aa9.02□□□□□ -0.96
COL12A1-205ENST00000425443 ACYP1P07311 99 aa9.02□□□□□ -0.97
COL12A1-205ENST00000425443 HIST1H4AP62805 103 aaKnown RBP9.02□□□□□ -0.97
COL12A1-205ENST00000425443 SPATA3Q8NHX4 192 aa9.02□□□□□ -0.97
COL12A1-205ENST00000425443 X6R8D5 127 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms