RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 SPAG11BQ08648 103 aa6.2□□□□□ -1.42
NF1-203ENST00000422121 UNQ6190/PRO20217Q6UXQ8 127 aa6.2□□□□□ -1.42
NF1-203ENST00000422121 STPG4Q8N801 248 aa6.2□□□□□ -1.42
NF1-203ENST00000422121 DPH3Q96FX2 82 aa6.2□□□□□ -1.42
NF1-203ENST00000422121 VCX2Q9H322 139 aa6.2□□□□□ -1.42
NF1-203ENST00000422121 HMCN2Q8NDA2 5059 aa6.19□□□□□ -1.42
NF1-203ENST00000422121 A0A1W2PNN7 141 aa6.19□□□□□ -1.42
NF1-203ENST00000422121 APOMO95445 188 aa6.19□□□□□ -1.42
NF1-203ENST00000422121 RPL37AP61513 92 aaKnown RBP6.19□□□□□ -1.42
NF1-203ENST00000422121 ERASQ7Z444 233 aa6.19□□□□□ -1.42
NF1-203ENST00000422121 C18orf32Q8TCD1 76 aa6.19□□□□□ -1.42
NF1-203ENST00000422121 CAMK2N2Q96S95 79 aa6.19□□□□□ -1.42
NF1-203ENST00000422121 C6orf48Q9UBA6 75 aa6.19□□□□□ -1.42
NF1-203ENST00000422121 TRAPPC1Q9Y5R8 145 aa6.19□□□□□ -1.42
NF1-203ENST00000422121 C2orf82Q6UX34 121 aa6.18□□□□□ -1.42
NF1-203ENST00000422121 LINC01561Q8N1V8 128 aa6.18□□□□□ -1.42
NF1-203ENST00000422121 SCGB3A1Q96QR1 104 aa6.18□□□□□ -1.42
NF1-203ENST00000422121 MRPL35Q9NZE8 188 aaKnown RBP6.18□□□□□ -1.42
NF1-203ENST00000422121 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
NF1-203ENST00000422121 LOC107984640A0A0U1RRK4 108 aa6.17□□□□□ -1.42
NF1-203ENST00000422121 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
NF1-203ENST00000422121 GAGE2BQ13066 116 aa6.17□□□□□ -1.42
NF1-203ENST00000422121 Q6ZN92 141 aa6.17□□□□□ -1.42
NF1-203ENST00000422121 Q6ZRP5 223 aa6.17□□□□□ -1.42
NF1-203ENST00000422121 KRTAP7-1Q8IUC3 87 aa6.17□□□□□ -1.42
NF1-203ENST00000422121 CST9LQ9H4G1 147 aa6.17□□□□□ -1.42
NF1-203ENST00000422121 G0S2P27469 103 aa6.16□□□□□ -1.42
NF1-203ENST00000422121 NDUFA5Q16718 116 aa6.16□□□□□ -1.42
NF1-203ENST00000422121 CBLN2Q8IUK8 224 aa6.16□□□□□ -1.42
NF1-203ENST00000422121 C2orf88Q9BSF0 95 aa6.16□□□□□ -1.42
NF1-203ENST00000422121 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
NF1-203ENST00000422121 IGLV5-45A0A087WSX0 123 aa6.15□□□□□ -1.42
NF1-203ENST00000422121 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
NF1-203ENST00000422121 F8WDY8 70 aa6.15□□□□□ -1.42
NF1-203ENST00000422121 NDUFA1O15239 70 aa6.15□□□□□ -1.42
NF1-203ENST00000422121 LINC00614P0C842 121 aa6.15□□□□□ -1.42
NF1-203ENST00000422121 TLX1NBP0CAT3 122 aa6.15□□□□□ -1.42
NF1-203ENST00000422121 PMCHL1Q16048 86 aa6.15□□□□□ -1.42
NF1-203ENST00000422121 C9orf116Q5BN46 136 aaPredicted RBP6.15□□□□□ -1.42
NF1-203ENST00000422121 FA2HQ7L5A8 372 aa6.15□□□□□ -1.42
NF1-203ENST00000422121 TINCRA0A1B0GVN0 87 aa6.14□□□□□ -1.43
NF1-203ENST00000422121 FAM168BA1KXE4 195 aa6.14□□□□□ -1.43
NF1-203ENST00000422121 HERVK_113P63121 156 aa6.14□□□□□ -1.43
NF1-203ENST00000422121 PDZD11Q5EBL8 140 aa6.14□□□□□ -1.43
NF1-203ENST00000422121 PAPPA-AS1Q5QFB9 102 aa6.14□□□□□ -1.43
NF1-203ENST00000422121 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
NF1-203ENST00000422121 SMIM1B2RUZ4 78 aa6.13□□□□□ -1.43
NF1-203ENST00000422121 PRR3P79522 188 aaKnown RBP6.13□□□□□ -1.43
NF1-203ENST00000422121 RPL18AQ02543 176 aaKnown RBP6.13□□□□□ -1.43
NF1-203ENST00000422121 PMVKQ15126 192 aa6.13□□□□□ -1.43
NF1-203ENST00000422121 Q8IZM0 81 aa6.13□□□□□ -1.43
NF1-203ENST00000422121 SMCO4Q9NRQ5 59 aa6.13□□□□□ -1.43
NF1-203ENST00000422121 TRBV30A0A0K0K1B3 111 aa6.12□□□□□ -1.43
NF1-203ENST00000422121 LINC01549A6NIU2 74 aa6.12□□□□□ -1.43
NF1-203ENST00000422121 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
NF1-203ENST00000422121 SRSF9Q13242 221 aaKnown RBP eCLIP6.12□□□□□ -1.43
NF1-203ENST00000422121 C9orf129Q5T035 196 aaKnown RBP6.12□□□□□ -1.43
NF1-203ENST00000422121 PKIGQ9Y2B9 76 aa6.12□□□□□ -1.43
NF1-203ENST00000422121 COLCA2A8K830 154 aa6.11□□□□□ -1.43
NF1-203ENST00000422121 HBDP02042 147 aa6.11□□□□□ -1.43
NF1-203ENST00000422121 SEC11AP67812 179 aa6.11□□□□□ -1.43
NF1-203ENST00000422121 GAGE2EQ4V326 116 aa6.11□□□□□ -1.43
NF1-203ENST00000422121 PHF5AQ7RTV0 110 aaKnown RBP6.11□□□□□ -1.43
NF1-203ENST00000422121 LINC00469Q8N7U9 141 aa6.11□□□□□ -1.43
NF1-203ENST00000422121 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
NF1-203ENST00000422121 GEMIN7Q9H840 131 aaKnown RBP6.11□□□□□ -1.43
NF1-203ENST00000422121 TOMM7Q9P0U1 55 aa6.11□□□□□ -1.43
NF1-203ENST00000422121 GAGE2DQ9UEU5 116 aa6.11□□□□□ -1.43
NF1-203ENST00000422121 NDUFC2-KCTD14E9PQ53 114 aa6.1□□□□□ -1.43
NF1-203ENST00000422121 OXTP01178 125 aa6.1□□□□□ -1.43
NF1-203ENST00000422121 TRGC2P03986 189 aa6.1□□□□□ -1.43
NF1-203ENST00000422121 IGLC3P0DOY3 106 aa6.1□□□□□ -1.43
NF1-203ENST00000422121 C6orf226Q5I0X4 101 aa6.1□□□□□ -1.43
NF1-203ENST00000422121 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
NF1-203ENST00000422121 IGLV5-39A0A0G2JS06 123 aa6.09□□□□□ -1.43
NF1-203ENST00000422121 SPINK8P0C7L1 97 aa6.09□□□□□ -1.43
NF1-203ENST00000422121 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.43
NF1-203ENST00000422121 C11orf86A6NJI1 115 aa6.08□□□□□ -1.44
NF1-203ENST00000422121 F8VRH5 84 aa6.08□□□□□ -1.44
NF1-203ENST00000422121 NUPR1O60356 82 aa6.08□□□□□ -1.44
NF1-203ENST00000422121 ZNF22P17026 224 aaPredicted RBP6.08□□□□□ -1.44
NF1-203ENST00000422121 RAB5BP61020 215 aa6.08□□□□□ -1.44
NF1-203ENST00000422121 COX7B2Q8TF08 81 aa6.08□□□□□ -1.44
NF1-203ENST00000422121 CHCHD1Q96BP2 118 aaKnown RBP6.08□□□□□ -1.44
NF1-203ENST00000422121 PACRGQ96M98 296 aaPredicted RBP6.08□□□□□ -1.44
NF1-203ENST00000422121 PRSS2P07478 247 aa6.07□□□□□ -1.44
NF1-203ENST00000422121 CKS1BP61024 79 aa6.07□□□□□ -1.44
NF1-203ENST00000422121 SERTAD4-AS1Q5TG53 156 aa6.07□□□□□ -1.44
NF1-203ENST00000422121 FAM19A5Q7Z5A7 132 aaPredicted RBP6.07□□□□□ -1.44
NF1-203ENST00000422121 BAGE3Q86Y29 109 aa6.07□□□□□ -1.44
NF1-203ENST00000422121 FAM19A2Q8N3H0 131 aa6.07□□□□□ -1.44
NF1-203ENST00000422121 SCO1O75880 301 aa6.06□□□□□ -1.44
NF1-203ENST00000422121 ATP5LO75964 103 aa6.06□□□□□ -1.44
NF1-203ENST00000422121 NDUFA6P56556 154 aa6.06□□□□□ -1.44
NF1-203ENST00000422121 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
NF1-203ENST00000422121 XAGE1AQ9HD64 81 aa6.06□□□□□ -1.44
NF1-203ENST00000422121 TRAV12-1A0A0B4J245 112 aa6.04□□□□□ -1.44
NF1-203ENST00000422121 SERF1AO75920 110 aa6.04□□□□□ -1.44
NF1-203ENST00000422121 CXCL5P42830 114 aa6.04□□□□□ -1.44
NF1-203ENST00000422121 SPINK6Q6UWN8 80 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms