RNA–Protein interactions for RNA: ENST00000419650.1

GACAT1-201, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-201ENST00000419650 FAM19A3Q7Z5A8 133 aa5.29□□□□□ -1.56
GACAT1-201ENST00000419650 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
GACAT1-201ENST00000419650 GEMIN7Q9H840 131 aaKnown RBP5.29□□□□□ -1.56
GACAT1-201ENST00000419650 SMCO4Q9NRQ5 59 aa5.29□□□□□ -1.56
GACAT1-201ENST00000419650 TOMM7Q9P0U1 55 aa5.29□□□□□ -1.56
GACAT1-201ENST00000419650 GAGE2DQ9UEU5 116 aa5.29□□□□□ -1.56
GACAT1-201ENST00000419650 CDKN2A-AS1Q9UH64 79 aa5.29□□□□□ -1.56
GACAT1-201ENST00000419650 TRBV30A0A0K0K1B3 111 aa5.28□□□□□ -1.56
GACAT1-201ENST00000419650 FAM168BA1KXE4 195 aa5.28□□□□□ -1.56
GACAT1-201ENST00000419650 SNAPINO95295 136 aa5.28□□□□□ -1.56
GACAT1-201ENST00000419650 PRSS2P07478 247 aa5.28□□□□□ -1.56
GACAT1-201ENST00000419650 TLX1NBP0CAT3 122 aa5.28□□□□□ -1.56
GACAT1-201ENST00000419650 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
GACAT1-201ENST00000419650 HERVK_113P63121 156 aa5.28□□□□□ -1.56
GACAT1-201ENST00000419650 SEC11AP67812 179 aa5.28□□□□□ -1.56
GACAT1-201ENST00000419650 PHF5AQ7RTV0 110 aaKnown RBP5.28□□□□□ -1.56
GACAT1-201ENST00000419650 FAM19A5Q7Z5A7 132 aaPredicted RBP5.28□□□□□ -1.56
GACAT1-201ENST00000419650 CKS1BP61024 79 aa5.27□□□□□ -1.57
GACAT1-201ENST00000419650 NDUFA5Q16718 116 aa5.27□□□□□ -1.57
GACAT1-201ENST00000419650 Q8IZM0 81 aa5.27□□□□□ -1.57
GACAT1-201ENST00000419650 SVBPQ8N300 66 aa5.27□□□□□ -1.57
GACAT1-201ENST00000419650 LINC00469Q8N7U9 141 aa5.27□□□□□ -1.57
GACAT1-201ENST00000419650 PACRGQ96M98 296 aaPredicted RBP5.27□□□□□ -1.57
GACAT1-201ENST00000419650 TRAPPC1Q9Y5R8 145 aa5.27□□□□□ -1.57
GACAT1-201ENST00000419650 LINC01549A6NIU2 74 aa5.26□□□□□ -1.57
GACAT1-201ENST00000419650 C6orf226Q5I0X4 101 aa5.26□□□□□ -1.57
GACAT1-201ENST00000419650 C18orf32Q8TCD1 76 aa5.26□□□□□ -1.57
GACAT1-201ENST00000419650 CST9LQ9H4G1 147 aa5.26□□□□□ -1.57
GACAT1-201ENST00000419650 PSORS1C2Q9UIG4 136 aa5.26□□□□□ -1.57
GACAT1-201ENST00000419650 A0A096LNJ9 63 aa5.25□□□□□ -1.57
GACAT1-201ENST00000419650 TINCRA0A1B0GVN0 87 aa5.25□□□□□ -1.57
GACAT1-201ENST00000419650 SMIM1B2RUZ4 78 aa5.25□□□□□ -1.57
GACAT1-201ENST00000419650 NDUFC2-KCTD14E9PQ53 114 aa5.25□□□□□ -1.57
GACAT1-201ENST00000419650 PMVKQ15126 192 aa5.25□□□□□ -1.57
GACAT1-201ENST00000419650 C9orf129Q5T035 196 aaKnown RBP5.25□□□□□ -1.57
GACAT1-201ENST00000419650 SPINK6Q6UWN8 80 aa5.25□□□□□ -1.57
GACAT1-201ENST00000419650 KRTAP7-1Q8IUC3 87 aa5.25□□□□□ -1.57
GACAT1-201ENST00000419650 URB1-AS1Q96HZ7 61 aa5.25□□□□□ -1.57
GACAT1-201ENST00000419650 HERC1Q15751 4861 aa5.24□□□□□ -1.57
GACAT1-201ENST00000419650 IGLV5-45A0A087WSX0 123 aa5.24□□□□□ -1.57
GACAT1-201ENST00000419650 F8VRH5 84 aa5.24□□□□□ -1.57
GACAT1-201ENST00000419650 M0QXV9 152 aa5.24□□□□□ -1.57
GACAT1-201ENST00000419650 SPINK8P0C7L1 97 aa5.24□□□□□ -1.57
GACAT1-201ENST00000419650 SRSF9Q13242 221 aaKnown RBP eCLIP5.24□□□□□ -1.57
GACAT1-201ENST00000419650 PMCHL1Q16048 86 aa5.24□□□□□ -1.57
GACAT1-201ENST00000419650 C1orf137Q5JT78 98 aa5.24□□□□□ -1.57
GACAT1-201ENST00000419650 SERTAD4-AS1Q5TG53 156 aa5.24□□□□□ -1.57
GACAT1-201ENST00000419650 KRTAP11-1Q8IUC1 163 aa5.24□□□□□ -1.57
GACAT1-201ENST00000419650 LINC00614P0C842 121 aa5.23□□□□□ -1.57
GACAT1-201ENST00000419650 NDUFA6P56556 154 aa5.23□□□□□ -1.57
GACAT1-201ENST00000419650 PDZD11Q5EBL8 140 aa5.23□□□□□ -1.57
GACAT1-201ENST00000419650 REG3GQ6UW15 175 aa5.23□□□□□ -1.57
GACAT1-201ENST00000419650 COX7B2Q8TF08 81 aa5.23□□□□□ -1.57
GACAT1-201ENST00000419650 LINC01600Q96MT4 127 aa5.23□□□□□ -1.57
GACAT1-201ENST00000419650 YPEL4Q96NS1 127 aa5.23□□□□□ -1.57
GACAT1-201ENST00000419650 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
GACAT1-201ENST00000419650 XAGE1AQ9HD64 81 aa5.23□□□□□ -1.57
GACAT1-201ENST00000419650 PKHD1L1Q86WI1 4243 aa5.22□□□□□ -1.57
GACAT1-201ENST00000419650 HBDP02042 147 aa5.22□□□□□ -1.57
GACAT1-201ENST00000419650 CXCL5P42830 114 aa5.22□□□□□ -1.57
GACAT1-201ENST00000419650 ODF1Q14990 250 aa5.22□□□□□ -1.57
GACAT1-201ENST00000419650 CBLN2Q8IUK8 224 aa5.22□□□□□ -1.57
GACAT1-201ENST00000419650 PLA2G2DQ9UNK4 145 aa5.22□□□□□ -1.57
GACAT1-201ENST00000419650 H3BRM9 83 aa5.21□□□□□ -1.58
GACAT1-201ENST00000419650 IGLV7-43P04211 117 aa5.21□□□□□ -1.58
GACAT1-201ENST00000419650 IGLC3P0DOY3 106 aa5.21□□□□□ -1.58
GACAT1-201ENST00000419650 RAB5BP61020 215 aa5.21□□□□□ -1.58
GACAT1-201ENST00000419650 UBE2BP63146 152 aa5.21□□□□□ -1.58
GACAT1-201ENST00000419650 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.58
GACAT1-201ENST00000419650 ZNF22P17026 224 aaPredicted RBP5.2□□□□□ -1.58
GACAT1-201ENST00000419650 ATP5LO75964 103 aa5.19□□□□□ -1.58
GACAT1-201ENST00000419650 BAGE3Q86Y29 109 aa5.19□□□□□ -1.58
GACAT1-201ENST00000419650 IGLV5-39A0A0G2JS06 123 aa5.18□□□□□ -1.58
GACAT1-201ENST00000419650 C11orf86A6NJI1 115 aa5.18□□□□□ -1.58
GACAT1-201ENST00000419650 KRTAP10-8P60410 259 aa5.18□□□□□ -1.58
GACAT1-201ENST00000419650 SLC7A5P1Q8MH63 180 aa5.18□□□□□ -1.58
GACAT1-201ENST00000419650 DIRC1Q969H9 104 aa5.18□□□□□ -1.58
GACAT1-201ENST00000419650 CHCHD1Q96BP2 118 aaKnown RBP5.18□□□□□ -1.58
GACAT1-201ENST00000419650 C22orf24Q9Y442 160 aa5.18□□□□□ -1.58
GACAT1-201ENST00000419650 H0Y9J4 135 aa5.17□□□□□ -1.58
GACAT1-201ENST00000419650 TMEM170BQ5T4T1 132 aa5.17□□□□□ -1.58
GACAT1-201ENST00000419650 CHTOPQ9Y3Y2 248 aaKnown RBP5.17□□□□□ -1.58
GACAT1-201ENST00000419650 TRGC2P03986 189 aa5.16□□□□□ -1.58
GACAT1-201ENST00000419650 PFN2P35080 140 aa5.16□□□□□ -1.58
GACAT1-201ENST00000419650 LBHQ53QV2 105 aaPredicted RBP5.16□□□□□ -1.58
GACAT1-201ENST00000419650 MRPL55Q7Z7F7 128 aaKnown RBP5.16□□□□□ -1.58
GACAT1-201ENST00000419650 FAM19A2Q8N3H0 131 aa5.16□□□□□ -1.58
GACAT1-201ENST00000419650 IFI27L1Q96BM0 104 aa5.16□□□□□ -1.58
GACAT1-201ENST00000419650 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
GACAT1-201ENST00000419650 TP73-AS1Q9UF72 201 aa5.16□□□□□ -1.58
GACAT1-201ENST00000419650 GAGE10A6NGK3 116 aa5.15□□□□□ -1.59
GACAT1-201ENST00000419650 RPL37AP8A6NKH3 93 aa5.15□□□□□ -1.59
GACAT1-201ENST00000419650 HSBP1O75506 76 aa5.15□□□□□ -1.59
GACAT1-201ENST00000419650 ZNF625Q96I27 306 aaPredicted RBP5.15□□□□□ -1.59
GACAT1-201ENST00000419650 ERG28Q9UKR5 140 aa5.15□□□□□ -1.59
GACAT1-201ENST00000419650 FAT3Q8TDW7 4589 aa5.14□□□□□ -1.59
GACAT1-201ENST00000419650 TRAV12-1A0A0B4J245 112 aa5.14□□□□□ -1.59
GACAT1-201ENST00000419650 NUPR1O60356 82 aa5.14□□□□□ -1.59
GACAT1-201ENST00000419650 LINC00310P59036 64 aa5.14□□□□□ -1.59
GACAT1-201ENST00000419650 PRR26Q8N8Z3 221 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms