RNA–Protein interactions for RNA: ENST00000419461.5

HLCS-203, Transcript of holocarboxylase synthetase, humanhuman

TSL 4

Gene HLCS, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-203ENST00000419461 FABP9Q0Z7S8 132 aa12.4□□□□□ -0.42
HLCS-203ENST00000419461 PACRGQ96M98 296 aaPredicted RBP12.4□□□□□ -0.42
HLCS-203ENST00000419461 NDUFC2-KCTD14E9PQ53 114 aa12.39□□□□□ -0.43
HLCS-203ENST00000419461 G0S2P27469 103 aa12.39□□□□□ -0.43
HLCS-203ENST00000419461 HERVK_113P63121 156 aa12.39□□□□□ -0.43
HLCS-203ENST00000419461 REG3GQ6UW15 175 aa12.39□□□□□ -0.43
HLCS-203ENST00000419461 PRSS2P07478 247 aa12.38□□□□□ -0.43
HLCS-203ENST00000419461 C6orf226Q5I0X4 101 aa12.38□□□□□ -0.43
HLCS-203ENST00000419461 PAPPA-AS1Q5QFB9 102 aa12.38□□□□□ -0.43
HLCS-203ENST00000419461 Q8IZM0 81 aa12.38□□□□□ -0.43
HLCS-203ENST00000419461 GEMIN7Q9H840 131 aaKnown RBP12.38□□□□□ -0.43
HLCS-203ENST00000419461 ATP6V1G1O75348 118 aa12.37□□□□□ -0.43
HLCS-203ENST00000419461 RHEBQ15382 184 aa12.37□□□□□ -0.43
HLCS-203ENST00000419461 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
HLCS-203ENST00000419461 CKS1BP61024 79 aa12.36□□□□□ -0.43
HLCS-203ENST00000419461 CST9LQ9H4G1 147 aa12.36□□□□□ -0.43
HLCS-203ENST00000419461 SMIM1B2RUZ4 78 aa12.35□□□□□ -0.43
HLCS-203ENST00000419461 M0QXV9 152 aa12.35□□□□□ -0.43
HLCS-203ENST00000419461 IGLV7-43P04211 117 aa12.35□□□□□ -0.43
HLCS-203ENST00000419461 S100A1P23297 94 aa12.35□□□□□ -0.43
HLCS-203ENST00000419461 SEC11AP67812 179 aa12.35□□□□□ -0.43
HLCS-203ENST00000419461 COX19Q49B96 90 aa12.35□□□□□ -0.43
HLCS-203ENST00000419461 URB1-AS1Q96HZ7 61 aa12.35□□□□□ -0.43
HLCS-203ENST00000419461 TINCRA0A1B0GVN0 87 aa12.34□□□□□ -0.43
HLCS-203ENST00000419461 FA2HQ7L5A8 372 aa12.34□□□□□ -0.43
HLCS-203ENST00000419461 IGLV5-45A0A087WSX0 123 aa12.33□□□□□ -0.44
HLCS-203ENST00000419461 A0A096LNJ9 63 aa12.33□□□□□ -0.44
HLCS-203ENST00000419461 XAGE1AQ9HD64 81 aa12.33□□□□□ -0.44
HLCS-203ENST00000419461 LRP2P98164 4655 aa12.31□□□□□ -0.44
HLCS-203ENST00000419461 F8VRH5 84 aa12.31□□□□□ -0.44
HLCS-203ENST00000419461 SPINK8P0C7L1 97 aa12.3□□□□□ -0.44
HLCS-203ENST00000419461 PMVKQ15126 192 aa12.3□□□□□ -0.44
HLCS-203ENST00000419461 C18orf32Q8TCD1 76 aa12.3□□□□□ -0.44
HLCS-203ENST00000419461 SMCO4Q9NRQ5 59 aa12.3□□□□□ -0.44
HLCS-203ENST00000419461 TRAPPC1Q9Y5R8 145 aa12.3□□□□□ -0.44
HLCS-203ENST00000419461 APOC3P02656 99 aa12.29□□□□□ -0.44
HLCS-203ENST00000419461 UBE2BP63146 152 aa12.29□□□□□ -0.44
HLCS-203ENST00000419461 PDZD11Q5EBL8 140 aa12.29□□□□□ -0.44
HLCS-203ENST00000419461 COX7B2Q8TF08 81 aa12.29□□□□□ -0.44
HLCS-203ENST00000419461 C22orf24Q9Y442 160 aa12.28□□□□□ -0.44
HLCS-203ENST00000419461 LINC01549A6NIU2 74 aa12.27□□□□□ -0.45
HLCS-203ENST00000419461 PMCHL1Q16048 86 aa12.27□□□□□ -0.45
HLCS-203ENST00000419461 DIRC1Q969H9 104 aa12.27□□□□□ -0.45
HLCS-203ENST00000419461 H0Y9J4 135 aa12.25□□□□□ -0.45
HLCS-203ENST00000419461 LINC00614P0C842 121 aa12.25□□□□□ -0.45
HLCS-203ENST00000419461 CXCL5P42830 114 aa12.25□□□□□ -0.45
HLCS-203ENST00000419461 SLC7A5P1Q8MH63 180 aa12.25□□□□□ -0.45
HLCS-203ENST00000419461 PRR26Q8N8Z3 221 aa12.25□□□□□ -0.45
HLCS-203ENST00000419461 YPEL4Q96NS1 127 aa12.24□□□□□ -0.45
HLCS-203ENST00000419461 KRTAP1-4P0C5Y4 121 aa12.23□□□□□ -0.45
HLCS-203ENST00000419461 IGLC3P0DOY3 106 aa12.23□□□□□ -0.45
HLCS-203ENST00000419461 NDUFA6P56556 154 aa12.23□□□□□ -0.45
HLCS-203ENST00000419461 RAB5BP61020 215 aa12.22□□□□□ -0.45
HLCS-203ENST00000419461 SNAPINO95295 136 aa12.21□□□□□ -0.45
HLCS-203ENST00000419461 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
HLCS-203ENST00000419461 SVBPQ8N300 66 aa12.21□□□□□ -0.45
HLCS-203ENST00000419461 IGLV5-39A0A0G2JS06 123 aa12.2□□□□□ -0.46
HLCS-203ENST00000419461 HBDP02042 147 aa12.2□□□□□ -0.46
HLCS-203ENST00000419461 H3BRM9 83 aa12.18□□□□□ -0.46
HLCS-203ENST00000419461 MRPL55Q7Z7F7 128 aaKnown RBP12.18□□□□□ -0.46
HLCS-203ENST00000419461 LBHQ53QV2 105 aaPredicted RBP12.17□□□□□ -0.46
HLCS-203ENST00000419461 LINC00167Q96N53 147 aa12.17□□□□□ -0.46
HLCS-203ENST00000419461 TP73-AS1Q9UF72 201 aa12.17□□□□□ -0.46
HLCS-203ENST00000419461 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
HLCS-203ENST00000419461 RPL37AP8A6NKH3 93 aa12.16□□□□□ -0.46
HLCS-203ENST00000419461 ZNF861PO60384 105 aa12.16□□□□□ -0.46
HLCS-203ENST00000419461 GAGE10A6NGK3 116 aa12.15□□□□□ -0.46
HLCS-203ENST00000419461 BAGE3Q86Y29 109 aa12.15□□□□□ -0.46
HLCS-203ENST00000419461 SCO1O75880 301 aa12.14□□□□□ -0.47
HLCS-203ENST00000419461 NUPR1O60356 82 aa12.13□□□□□ -0.47
HLCS-203ENST00000419461 ATP5LO75964 103 aa12.13□□□□□ -0.47
HLCS-203ENST00000419461 PFN2P35080 140 aa12.13□□□□□ -0.47
HLCS-203ENST00000419461 IGLV5-37A0A075B6J1 123 aa12.12□□□□□ -0.47
HLCS-203ENST00000419461 CBLN2Q8IUK8 224 aa12.12□□□□□ -0.47
HLCS-203ENST00000419461 ZNF625Q96I27 306 aaPredicted RBP12.11□□□□□ -0.47
HLCS-203ENST00000419461 IGLV1-50A0A075B6I6 118 aa12.1□□□□□ -0.47
HLCS-203ENST00000419461 BCE1O60756 84 aa12.1□□□□□ -0.47
HLCS-203ENST00000419461 TMEM170BQ5T4T1 132 aa12.1□□□□□ -0.47
HLCS-203ENST00000419461 RNF213Q63HN8 5207 aa12.1□□□□□ -0.47
HLCS-203ENST00000419461 LPAP08519 4548 aa12.1□□□□□ -0.47
HLCS-203ENST00000419461 Q8NDZ9 215 aa12.09□□□□□ -0.47
HLCS-203ENST00000419461 ERG28Q9UKR5 140 aa12.09□□□□□ -0.47
HLCS-203ENST00000419461 CHTOPQ9Y3Y2 248 aaKnown RBP12.09□□□□□ -0.47
HLCS-203ENST00000419461 SND1-IT1Q9HBX3 110 aa12.08□□□□□ -0.48
HLCS-203ENST00000419461 CHCHD1Q96BP2 118 aaKnown RBP12.07□□□□□ -0.48
HLCS-203ENST00000419461 VPREB1P12018 145 aa12.06□□□□□ -0.48
HLCS-203ENST00000419461 NKAPP1Q8N9T2 125 aa12.06□□□□□ -0.48
HLCS-203ENST00000419461 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
HLCS-203ENST00000419461 KRTAP13-1Q8IUC0 172 aa12.05□□□□□ -0.48
HLCS-203ENST00000419461 FAM19A2Q8N3H0 131 aa12.05□□□□□ -0.48
HLCS-203ENST00000419461 IGKV2-28A0A075B6P5 120 aa12.04□□□□□ -0.48
HLCS-203ENST00000419461 TMEM223A0PJW6 202 aa12.04□□□□□ -0.48
HLCS-203ENST00000419461 IGKV2D-28P01615 120 aa12.04□□□□□ -0.48
HLCS-203ENST00000419461 RPL28P46779 137 aaKnown RBP12.04□□□□□ -0.48
HLCS-203ENST00000419461 TRAV12-1A0A0B4J245 112 aa12.03□□□□□ -0.48
HLCS-203ENST00000419461 A0A087X002 238 aa12.02□□□□□ -0.49
HLCS-203ENST00000419461 TRGC2P03986 189 aa12.02□□□□□ -0.49
HLCS-203ENST00000419461 LINC00310P59036 64 aa12.02□□□□□ -0.49
HLCS-203ENST00000419461 ANAPC11Q9NYG5 84 aa12.02□□□□□ -0.49
HLCS-203ENST00000419461 COX17Q14061 63 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms