RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 GTF2H5Q6ZYL4 71 aa13.02□□□□□ -0.33
RAB3IP-205ENST00000417413 Q8IZM0 81 aa13.02□□□□□ -0.33
RAB3IP-205ENST00000417413 LINC00308Q8TCZ7 52 aa13.02□□□□□ -0.33
RAB3IP-205ENST00000417413 GAGE12HA6NDE8 117 aa12.99□□□□□ -0.33
RAB3IP-205ENST00000417413 KIAA0087Q14695 138 aa12.99□□□□□ -0.33
RAB3IP-205ENST00000417413 C6orf226Q5I0X4 101 aa12.99□□□□□ -0.33
RAB3IP-205ENST00000417413 SOSTDC1Q6X4U4 206 aa12.99□□□□□ -0.33
RAB3IP-205ENST00000417413 C15orf53Q8NAA6 179 aa12.99□□□□□ -0.33
RAB3IP-205ENST00000417413 SFTA2Q6UW10 78 aa12.99□□□□□ -0.33
RAB3IP-205ENST00000417413 HUWE1Q7Z6Z7 4374 aaKnown RBP12.98□□□□□ -0.33
RAB3IP-205ENST00000417413 PPDPFQ9H3Y8 114 aa12.98□□□□□ -0.33
RAB3IP-205ENST00000417413 UBE2WQ96B02 151 aa12.97□□□□□ -0.33
RAB3IP-205ENST00000417413 TRAV8-4A0A0B4J246 113 aa12.96□□□□□ -0.33
RAB3IP-205ENST00000417413 IBA57-AS1B1ANH7 110 aa12.96□□□□□ -0.33
RAB3IP-205ENST00000417413 MALP21145 153 aa12.96□□□□□ -0.33
RAB3IP-205ENST00000417413 CRPP02741 224 aa12.95□□□□□ -0.34
RAB3IP-205ENST00000417413 LINC01556Q5JQF7 62 aa12.95□□□□□ -0.34
RAB3IP-205ENST00000417413 COPS9Q8WXC6 57 aa12.95□□□□□ -0.34
RAB3IP-205ENST00000417413 KLK5Q9Y337 293 aaPredicted RBP12.95□□□□□ -0.34
RAB3IP-205ENST00000417413 C2orf82Q6UX34 121 aa12.95□□□□□ -0.34
RAB3IP-205ENST00000417413 ERG28Q9UKR5 140 aa12.95□□□□□ -0.34
RAB3IP-205ENST00000417413 MIR7-3HGQ8N6C7 128 aa12.94□□□□□ -0.34
RAB3IP-205ENST00000417413 KRTAP26-1Q6PEX3 210 aa12.93□□□□□ -0.34
RAB3IP-205ENST00000417413 LINC00158P58513 81 aa12.92□□□□□ -0.34
RAB3IP-205ENST00000417413 DNAH10OSP0CZ25 163 aa12.91□□□□□ -0.34
RAB3IP-205ENST00000417413 CXCL5P42830 114 aa12.91□□□□□ -0.34
RAB3IP-205ENST00000417413 CFAP161Q6P656 301 aa12.91□□□□□ -0.34
RAB3IP-205ENST00000417413 LINC00588Q9Y4M8 146 aa12.91□□□□□ -0.34
RAB3IP-205ENST00000417413 LOC107984156A0A0G2JMH3 177 aa12.91□□□□□ -0.34
RAB3IP-205ENST00000417413 CKS1BP61024 79 aa12.91□□□□□ -0.34
RAB3IP-205ENST00000417413 ARL17AQ8IVW1 177 aa12.91□□□□□ -0.34
RAB3IP-205ENST00000417413 H7C2G1 150 aa12.9□□□□□ -0.34
RAB3IP-205ENST00000417413 PFN2P35080 140 aa12.9□□□□□ -0.34
RAB3IP-205ENST00000417413 SPAG11BQ08648 103 aa12.88□□□□□ -0.35
RAB3IP-205ENST00000417413 LYRM7Q5U5X0 104 aa12.88□□□□□ -0.35
RAB3IP-205ENST00000417413 H3BMG7 143 aa12.87□□□□□ -0.35
RAB3IP-205ENST00000417413 TRBV30A0A0K0K1B3 111 aa12.86□□□□□ -0.35
RAB3IP-205ENST00000417413 RPL13AP40429 203 aaKnown RBP12.86□□□□□ -0.35
RAB3IP-205ENST00000417413 CCL18P55774 89 aa12.86□□□□□ -0.35
RAB3IP-205ENST00000417413 Q1RN00 199 aa12.86□□□□□ -0.35
RAB3IP-205ENST00000417413 C6orf223Q8N319 242 aa12.86□□□□□ -0.35
RAB3IP-205ENST00000417413 MEGF8Q7Z7M0 2845 aa12.85□□□□□ -0.35
RAB3IP-205ENST00000417413 PSMB2P49721 201 aa12.85□□□□□ -0.35
RAB3IP-205ENST00000417413 NUPR2A6NF83 97 aa12.84□□□□□ -0.35
RAB3IP-205ENST00000417413 TRIAP1O43715 76 aa12.84□□□□□ -0.35
RAB3IP-205ENST00000417413 TCL1BO95988 128 aa12.84□□□□□ -0.35
RAB3IP-205ENST00000417413 COX17Q14061 63 aa12.84□□□□□ -0.35
RAB3IP-205ENST00000417413 C10orf25Q5T742 122 aa12.84□□□□□ -0.35
RAB3IP-205ENST00000417413 LINC00526Q96FQ7 95 aa12.84□□□□□ -0.35
RAB3IP-205ENST00000417413 SND1-IT1Q9HBX3 110 aa12.84□□□□□ -0.35
RAB3IP-205ENST00000417413 TRBV20-1A0A075B6N2 111 aa12.83□□□□□ -0.36
RAB3IP-205ENST00000417413 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.36
RAB3IP-205ENST00000417413 UNQ6190/PRO20217Q6UXQ8 127 aa12.83□□□□□ -0.36
RAB3IP-205ENST00000417413 NTN5Q8WTR8 489 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-205ENST00000417413 UPK3BQ9BT76 320 aa12.83□□□□□ -0.36
RAB3IP-205ENST00000417413 DNAH9Q9NYC9 4486 aa12.83□□□□□ -0.36
RAB3IP-205ENST00000417413 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-205ENST00000417413 C1orf43Q9BWL3 253 aa12.82□□□□□ -0.36
RAB3IP-205ENST00000417413 PRO0461Q9UI25 63 aa12.82□□□□□ -0.36
RAB3IP-205ENST00000417413 IGKV2-28A0A075B6P5 120 aa12.81□□□□□ -0.36
RAB3IP-205ENST00000417413 IGKV2D-28P01615 120 aa12.81□□□□□ -0.36
RAB3IP-205ENST00000417413 STAB2Q8WWQ8 2551 aa12.8□□□□□ -0.36
RAB3IP-205ENST00000417413 COL7A1Q02388 2944 aa12.8□□□□□ -0.36
RAB3IP-205ENST00000417413 F8W1H4 67 aa12.8□□□□□ -0.36
RAB3IP-205ENST00000417413 C15orf56Q8N910 161 aa12.79□□□□□ -0.36
RAB3IP-205ENST00000417413 IGKV2D-24A0A075B6R9 120 aa12.78□□□□□ -0.36
RAB3IP-205ENST00000417413 GVQW2A0A096LPI5 108 aaPredicted RBP12.78□□□□□ -0.36
RAB3IP-205ENST00000417413 LINC00337Q8N6G1 96 aa12.78□□□□□ -0.36
RAB3IP-205ENST00000417413 TRAV13-2A0A0B4J235 113 aa12.77□□□□□ -0.36
RAB3IP-205ENST00000417413 WFDC2Q14508 124 aa12.77□□□□□ -0.36
RAB3IP-205ENST00000417413 APLNQ9ULZ1 77 aa12.77□□□□□ -0.36
RAB3IP-205ENST00000417413 HIGD2BQ4VC39 106 aa12.77□□□□□ -0.37
RAB3IP-205ENST00000417413 Q9HAA7 133 aa12.77□□□□□ -0.37
RAB3IP-205ENST00000417413 MTURNQ8N3F0 131 aa12.76□□□□□ -0.37
RAB3IP-205ENST00000417413 C6orf48Q9UBA6 75 aa12.76□□□□□ -0.37
RAB3IP-205ENST00000417413 MUC7Q8TAX7 377 aa12.75□□□□□ -0.37
RAB3IP-205ENST00000417413 PRKDCP78527 4128 aaKnown RBP12.75□□□□□ -0.37
RAB3IP-205ENST00000417413 ZNF561-AS1K7EIQ3 104 aa12.74□□□□□ -0.37
RAB3IP-205ENST00000417413 COX6CP09669 75 aa12.74□□□□□ -0.37
RAB3IP-205ENST00000417413 SMCPP49901 116 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-205ENST00000417413 ATXN8Q156A1 80 aa12.73□□□□□ -0.37
RAB3IP-205ENST00000417413 C2orf48Q96LS8 159 aa12.73□□□□□ -0.37
RAB3IP-205ENST00000417413 NDUFC2O95298 119 aa12.71□□□□□ -0.37
RAB3IP-205ENST00000417413 CAMK2N2Q96S95 79 aa12.71□□□□□ -0.37
RAB3IP-205ENST00000417413 RPL28P46779 137 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-205ENST00000417413 OCIAD2Q56VL3 154 aa12.7□□□□□ -0.38
RAB3IP-205ENST00000417413 CLEC2BQ92478 149 aa12.7□□□□□ -0.38
RAB3IP-205ENST00000417413 FBN3Q75N90 2809 aa12.7□□□□□ -0.38
RAB3IP-205ENST00000417413 F8WDY8 70 aa12.7□□□□□ -0.38
RAB3IP-205ENST00000417413 Q6ZRU5 148 aa12.7□□□□□ -0.38
RAB3IP-205ENST00000417413 Q8NDZ9 215 aa12.7□□□□□ -0.38
RAB3IP-205ENST00000417413 LINC01620Q4KN68 170 aa12.69□□□□□ -0.38
RAB3IP-205ENST00000417413 LST1O00453 97 aa12.68□□□□□ -0.38
RAB3IP-205ENST00000417413 UBE2DNLQ8IWF7 75 aa12.68□□□□□ -0.38
RAB3IP-205ENST00000417413 RMI2Q96E14 147 aa12.68□□□□□ -0.38
RAB3IP-205ENST00000417413 WWC2-AS2Q96NR7 200 aa12.68□□□□□ -0.38
RAB3IP-205ENST00000417413 PRR3P79522 188 aaKnown RBP12.67□□□□□ -0.38
RAB3IP-205ENST00000417413 CASC10Q5T4H9 136 aa12.67□□□□□ -0.38
RAB3IP-205ENST00000417413 SMIM11BQ8TCY0 68 aa12.67□□□□□ -0.38
RAB3IP-205ENST00000417413 C9JAW5 83 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms