RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 C1orf43Q9BWL3 253 aa7.94□□□□□ -1.14
GABRE-202ENST00000417300 CTAG1AP78358 180 aa7.93□□□□□ -1.14
GABRE-202ENST00000417300 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
GABRE-202ENST00000417300 DNAH6Q9C0G6 4158 aa7.92□□□□□ -1.14
GABRE-202ENST00000417300 APOMO95445 188 aa7.92□□□□□ -1.14
GABRE-202ENST00000417300 MALP21145 153 aa7.92□□□□□ -1.14
GABRE-202ENST00000417300 SCGB1D4Q6XE38 83 aa7.92□□□□□ -1.14
GABRE-202ENST00000417300 Q8IZM0 81 aa7.92□□□□□ -1.14
GABRE-202ENST00000417300 RMI2Q96E14 147 aa7.92□□□□□ -1.14
GABRE-202ENST00000417300 ZNF625Q96I27 306 aaPredicted RBP7.92□□□□□ -1.14
GABRE-202ENST00000417300 A0A0J9YXY3 114 aa7.91□□□□□ -1.14
GABRE-202ENST00000417300 HSD52Q0P140 79 aa7.91□□□□□ -1.14
GABRE-202ENST00000417300 SFTA2Q6UW10 78 aa7.91□□□□□ -1.14
GABRE-202ENST00000417300 ORAOV1Q8WV07 137 aa7.91□□□□□ -1.14
GABRE-202ENST00000417300 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
GABRE-202ENST00000417300 IGKV2D-24A0A075B6R9 120 aa7.9□□□□□ -1.14
GABRE-202ENST00000417300 CXCL5P42830 114 aa7.9□□□□□ -1.14
GABRE-202ENST00000417300 HERV-K104P63124 156 aa7.9□□□□□ -1.14
GABRE-202ENST00000417300 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
GABRE-202ENST00000417300 TAL2Q16559 108 aa7.9□□□□□ -1.14
GABRE-202ENST00000417300 Q9HAA7 133 aa7.9□□□□□ -1.14
GABRE-202ENST00000417300 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
GABRE-202ENST00000417300 TIMM17BO60830 172 aa7.89□□□□□ -1.15
GABRE-202ENST00000417300 PRSS2P07478 247 aa7.89□□□□□ -1.15
GABRE-202ENST00000417300 TTC32Q5I0X7 151 aa7.89□□□□□ -1.15
GABRE-202ENST00000417300 KRTAP1-5Q9BYS1 174 aa7.89□□□□□ -1.15
GABRE-202ENST00000417300 TMEM238C9JI98 176 aa7.88□□□□□ -1.15
GABRE-202ENST00000417300 M0R143 59 aa7.88□□□□□ -1.15
GABRE-202ENST00000417300 SPAG11BQ08648 103 aa7.88□□□□□ -1.15
GABRE-202ENST00000417300 C6orf226Q5I0X4 101 aa7.88□□□□□ -1.15
GABRE-202ENST00000417300 Q8N1X5 172 aa7.88□□□□□ -1.15
GABRE-202ENST00000417300 COX11Q9Y6N1 276 aa7.88□□□□□ -1.15
GABRE-202ENST00000417300 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
GABRE-202ENST00000417300 NBDYA0A0U1RRE5 68 aa7.87□□□□□ -1.15
GABRE-202ENST00000417300 CFAP161Q6P656 301 aa7.87□□□□□ -1.15
GABRE-202ENST00000417300 LITAFQ99732 161 aa7.87□□□□□ -1.15
GABRE-202ENST00000417300 SNHG12Q9BXW3 62 aa7.87□□□□□ -1.15
GABRE-202ENST00000417300 EREGO14944 169 aa7.86□□□□□ -1.15
GABRE-202ENST00000417300 HINT1P49773 126 aaPredicted RBP7.86□□□□□ -1.15
GABRE-202ENST00000417300 BVES-AS1Q5T3Y7 98 aa7.86□□□□□ -1.15
GABRE-202ENST00000417300 C15orf56Q8N910 161 aa7.86□□□□□ -1.15
GABRE-202ENST00000417300 HIST1H4GQ99525 98 aa7.86□□□□□ -1.15
GABRE-202ENST00000417300 TM2D2Q9BX73 214 aa7.86□□□□□ -1.15
GABRE-202ENST00000417300 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
GABRE-202ENST00000417300 CKS1BP61024 79 aa7.85□□□□□ -1.15
GABRE-202ENST00000417300 CIRBPQ14011 172 aaKnown RBP7.85□□□□□ -1.15
GABRE-202ENST00000417300 Q6ZVH6 145 aa7.85□□□□□ -1.15
GABRE-202ENST00000417300 CEND1Q8N111 149 aa7.85□□□□□ -1.15
GABRE-202ENST00000417300 SPANXDQ9BXN6 97 aa7.85□□□□□ -1.15
GABRE-202ENST00000417300 SPANXCQ9NY87 97 aa7.85□□□□□ -1.15
GABRE-202ENST00000417300 GVQW2A0A096LPI5 108 aaPredicted RBP7.84□□□□□ -1.15
GABRE-202ENST00000417300 SRSF9Q13242 221 aaKnown RBP eCLIP7.84□□□□□ -1.15
GABRE-202ENST00000417300 MEIG1Q5JSS6 88 aa7.84□□□□□ -1.15
GABRE-202ENST00000417300 C2orf82Q6UX34 121 aa7.84□□□□□ -1.15
GABRE-202ENST00000417300 NTN5Q8WTR8 489 aaPredicted RBP7.84□□□□□ -1.15
GABRE-202ENST00000417300 F8WDY8 70 aa7.83□□□□□ -1.16
GABRE-202ENST00000417300 ZNF561-AS1K7EIQ3 104 aa7.83□□□□□ -1.16
GABRE-202ENST00000417300 GCSHP23434 173 aa7.83□□□□□ -1.16
GABRE-202ENST00000417300 C2orf48Q96LS8 159 aa7.83□□□□□ -1.16
GABRE-202ENST00000417300 PTTG1IPP53801 180 aa7.82□□□□□ -1.16
GABRE-202ENST00000417300 FXYD2P54710 66 aa7.82□□□□□ -1.16
GABRE-202ENST00000417300 BATFQ16520 125 aa7.82□□□□□ -1.16
GABRE-202ENST00000417300 HIGD2BQ4VC39 106 aa7.82□□□□□ -1.16
GABRE-202ENST00000417300 LBHQ53QV2 105 aaPredicted RBP7.82□□□□□ -1.16
GABRE-202ENST00000417300 ADAMTSL4-AS1Q5T5F5 129 aa7.82□□□□□ -1.16
GABRE-202ENST00000417300 ERG28Q9UKR5 140 aa7.82□□□□□ -1.16
GABRE-202ENST00000417300 USP17L23D6RBM5 183 aa7.81□□□□□ -1.16
GABRE-202ENST00000417300 SMIM13P0DJ93 91 aa7.81□□□□□ -1.16
GABRE-202ENST00000417300 IFITM1P13164 125 aa7.81□□□□□ -1.16
GABRE-202ENST00000417300 C6orf223Q8N319 242 aa7.81□□□□□ -1.16
GABRE-202ENST00000417300 PPDPFQ9H3Y8 114 aa7.81□□□□□ -1.16
GABRE-202ENST00000417300 LRP1BQ9NZR2 4599 aa7.81□□□□□ -1.16
GABRE-202ENST00000417300 TRBV30A0A0K0K1B3 111 aa7.8□□□□□ -1.16
GABRE-202ENST00000417300 TMEM238LA0A1B0GVL6 79 aa7.8□□□□□ -1.16
GABRE-202ENST00000417300 A6NJY4 79 aa7.8□□□□□ -1.16
GABRE-202ENST00000417300 COX17Q14061 63 aa7.8□□□□□ -1.16
GABRE-202ENST00000417300 UNQ6190/PRO20217Q6UXQ8 127 aa7.8□□□□□ -1.16
GABRE-202ENST00000417300 Q6ZR54 194 aa7.8□□□□□ -1.16
GABRE-202ENST00000417300 LINC00526Q96FQ7 95 aa7.8□□□□□ -1.16
GABRE-202ENST00000417300 MYCBP2O75592 4640 aa7.79□□□□□ -1.16
GABRE-202ENST00000417300 A6NDN8 102 aa7.79□□□□□ -1.16
GABRE-202ENST00000417300 C10orf25Q5T742 122 aa7.79□□□□□ -1.16
GABRE-202ENST00000417300 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
GABRE-202ENST00000417300 MUSTN1Q8IVN3 82 aa7.79□□□□□ -1.16
GABRE-202ENST00000417300 COPS9Q8WXC6 57 aa7.79□□□□□ -1.16
GABRE-202ENST00000417300 CAMK2N2Q96S95 79 aa7.79□□□□□ -1.16
GABRE-202ENST00000417300 A0A0U1RRA0 63 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 PSCAO43653 123 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 INAFM2P0DMQ5 153 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 LINC00158P58513 81 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 RPL24P83731 157 aaKnown RBP7.78□□□□□ -1.16
GABRE-202ENST00000417300 COL5A1-AS1Q5SY13 56 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 MIR7-3HGQ8N6C7 128 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 DAND5Q8N907 189 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 LINC00308Q8TCZ7 52 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 C6orf48Q9UBA6 75 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 HMCN2Q8NDA2 5059 aa7.78□□□□□ -1.16
GABRE-202ENST00000417300 A0A1B0GWB2 263 aa7.77□□□□□ -1.17
GABRE-202ENST00000417300 PFN2P35080 140 aa7.77□□□□□ -1.17
GABRE-202ENST00000417300 LCE2DQ5TA82 110 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms