RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 ZCCHC13Q8WW36 166 aaKnown RBP3.22□□□□□ -1.89
TTC39DP-201ENST00000416781 ZFHX2Q9C0A1 2572 aaPredicted RBP3.21□□□□□ -1.89
TTC39DP-201ENST00000416781 TRBV6-6A0A0A6YYG2 114 aa3.21□□□□□ -1.9
TTC39DP-201ENST00000416781 IGIPA6NJ69 53 aa3.21□□□□□ -1.9
TTC39DP-201ENST00000416781 F8VRH5 84 aa3.21□□□□□ -1.9
TTC39DP-201ENST00000416781 PIN1P1O15428 100 aa3.21□□□□□ -1.9
TTC39DP-201ENST00000416781 NDUFB1O75438 58 aa3.21□□□□□ -1.9
TTC39DP-201ENST00000416781 TRAV21A0A0B4J279 112 aa3.2□□□□□ -1.9
TTC39DP-201ENST00000416781 PDE6HQ13956 83 aa3.2□□□□□ -1.9
TTC39DP-201ENST00000416781 COX7B2Q8TF08 81 aa3.2□□□□□ -1.9
TTC39DP-201ENST00000416781 ZNF318Q5VUA4 2279 aa3.2□□□□□ -1.9
TTC39DP-201ENST00000416781 CEP192Q8TEP8 1941 aa3.2□□□□□ -1.9
TTC39DP-201ENST00000416781 COL4A5P29400 1685 aa3.2□□□□□ -1.9
TTC39DP-201ENST00000416781 A0A0J9YX75 114 aa3.2□□□□□ -1.9
TTC39DP-201ENST00000416781 CCL18P55774 89 aa3.2□□□□□ -1.9
TTC39DP-201ENST00000416781 ST20-AS1Q8NBB2 130 aa3.2□□□□□ -1.9
TTC39DP-201ENST00000416781 TNCP24821 2201 aa3.19□□□□□ -1.9
TTC39DP-201ENST00000416781 TRAV40A0A0B4J280 105 aa3.19□□□□□ -1.9
TTC39DP-201ENST00000416781 I3L3M4 83 aa3.19□□□□□ -1.9
TTC39DP-201ENST00000416781 CCL3L1P16619 93 aa3.19□□□□□ -1.9
TTC39DP-201ENST00000416781 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
TTC39DP-201ENST00000416781 LINC00208Q96KT6 92 aa3.19□□□□□ -1.9
TTC39DP-201ENST00000416781 UBL5Q9BZL1 73 aa3.19□□□□□ -1.9
TTC39DP-201ENST00000416781 TMEM14CQ9P0S9 112 aa3.19□□□□□ -1.9
TTC39DP-201ENST00000416781 A0A1W2PNU3 283 aaPredicted RBP3.18□□□□□ -1.9
TTC39DP-201ENST00000416781 SPINK7P58062 85 aa3.18□□□□□ -1.9
TTC39DP-201ENST00000416781 ALPK2Q86TB3 2170 aa3.18□□□□□ -1.9
TTC39DP-201ENST00000416781 IGKV3OR2-268A0A0C4DH90 116 aa3.17□□□□□ -1.9
TTC39DP-201ENST00000416781 CTSGP08311 255 aa3.17□□□□□ -1.9
TTC39DP-201ENST00000416781 KRTAP10-3P60369 221 aa3.17□□□□□ -1.9
TTC39DP-201ENST00000416781 FXYD3Q14802 87 aa3.17□□□□□ -1.9
TTC39DP-201ENST00000416781 SPRR4Q96PI1 79 aa3.17□□□□□ -1.9
TTC39DP-201ENST00000416781 M0R1W7 72 aa3.17□□□□□ -1.9
TTC39DP-201ENST00000416781 ZNF137PP52743 207 aa3.17□□□□□ -1.9
TTC39DP-201ENST00000416781 HCP5Q6MZN7 132 aa3.17□□□□□ -1.9
TTC39DP-201ENST00000416781 R4GMQ9 66 aa3.17□□□□□ -1.9
TTC39DP-201ENST00000416781 TIMM8BQ9Y5J9 83 aaPredicted RBP3.16□□□□□ -1.9
TTC39DP-201ENST00000416781 TRBV6-1A0A0K0K1D8 114 aa3.15□□□□□ -1.9
TTC39DP-201ENST00000416781 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.9
TTC39DP-201ENST00000416781 LINC00322Q6ZN03 302 aaPredicted RBP3.15□□□□□ -1.9
TTC39DP-201ENST00000416781 WFDC9Q8NEX5 89 aa3.15□□□□□ -1.9
TTC39DP-201ENST00000416781 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.9
TTC39DP-201ENST00000416781 ADAMTS9Q9P2N4 1935 aa3.15□□□□□ -1.91
TTC39DP-201ENST00000416781 SRCAPQ6ZRS2 3230 aa3.15□□□□□ -1.91
TTC39DP-201ENST00000416781 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
TTC39DP-201ENST00000416781 H0Y9P7 68 aa3.14□□□□□ -1.91
TTC39DP-201ENST00000416781 KRTAP1-4P0C5Y4 121 aa3.14□□□□□ -1.91
TTC39DP-201ENST00000416781 PATE1Q8WXA2 126 aa3.14□□□□□ -1.91
TTC39DP-201ENST00000416781 HIGD2AQ9BW72 106 aa3.14□□□□□ -1.91
TTC39DP-201ENST00000416781 ANKRD17O75179 2603 aaKnown RBP3.14□□□□□ -1.91
TTC39DP-201ENST00000416781 UQCR11O14957 56 aa3.14□□□□□ -1.91
TTC39DP-201ENST00000416781 ZNF861PO60384 105 aa3.14□□□□□ -1.91
TTC39DP-201ENST00000416781 PDE6GP18545 87 aa3.14□□□□□ -1.91
TTC39DP-201ENST00000416781 MGPP08493 103 aa3.13□□□□□ -1.91
TTC39DP-201ENST00000416781 ARL14EPLP0DKL9 152 aa3.13□□□□□ -1.91
TTC39DP-201ENST00000416781 NDPQ00604 133 aa3.13□□□□□ -1.91
TTC39DP-201ENST00000416781 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
TTC39DP-201ENST00000416781 JMJD7-PLA2G4BH0Y9G9 81 aa3.12□□□□□ -1.91
TTC39DP-201ENST00000416781 IGLV3-19P01714 112 aa3.12□□□□□ -1.91
TTC39DP-201ENST00000416781 IGLV3-1P01715 115 aa3.12□□□□□ -1.91
TTC39DP-201ENST00000416781 PRO2289Q9P1D8 64 aa3.12□□□□□ -1.91
TTC39DP-201ENST00000416781 BPTFQ12830 3046 aa3.12□□□□□ -1.91
TTC39DP-201ENST00000416781 CACNA1CQ13936 2221 aa3.11□□□□□ -1.91
TTC39DP-201ENST00000416781 A0A087WTM6 91 aa3.11□□□□□ -1.91
TTC39DP-201ENST00000416781 C10orf113Q5VZT2 155 aa3.11□□□□□ -1.91
TTC39DP-201ENST00000416781 ZNF625Q96I27 306 aaPredicted RBP3.11□□□□□ -1.91
TTC39DP-201ENST00000416781 WFDC10AQ9H1F0 79 aa3.11□□□□□ -1.91
TTC39DP-201ENST00000416781 TMEM167BQ9NRX6 74 aa3.11□□□□□ -1.91
TTC39DP-201ENST00000416781 NDUFA3O95167 84 aa3.1□□□□□ -1.91
TTC39DP-201ENST00000416781 DEFB132Q7Z7B7 95 aa3.1□□□□□ -1.91
TTC39DP-201ENST00000416781 PSORS1C2Q9UIG4 136 aa3.1□□□□□ -1.91
TTC39DP-201ENST00000416781 KLK9Q9UKQ9 250 aa3.1□□□□□ -1.91
TTC39DP-201ENST00000416781 KMT2BQ9UMN6 2715 aaPredicted RBP3.09□□□□□ -1.91
TTC39DP-201ENST00000416781 UTRNP46939 3433 aa3.09□□□□□ -1.91
TTC39DP-201ENST00000416781 DEFB114Q30KQ6 69 aa3.09□□□□□ -1.91
TTC39DP-201ENST00000416781 MED13LQ71F56 2210 aa3.09□□□□□ -1.92
TTC39DP-201ENST00000416781 BRWD1Q9NSI6 2320 aa3.08□□□□□ -1.92
TTC39DP-201ENST00000416781 LINC00959A0A1B0GUT2 108 aa3.08□□□□□ -1.92
TTC39DP-201ENST00000416781 RNASE3P12724 160 aaKnown RBP3.08□□□□□ -1.92
TTC39DP-201ENST00000416781 C4orf3Q8WVX3 66 aa3.08□□□□□ -1.92
TTC39DP-201ENST00000416781 SEC16AO15027 2179 aa3.08□□□□□ -1.92
TTC39DP-201ENST00000416781 GAFA1Q96PS6 74 aa3.08□□□□□ -1.92
TTC39DP-201ENST00000416781 NBDYA0A0U1RRE5 68 aa3.07□□□□□ -1.92
TTC39DP-201ENST00000416781 NDUFA4O00483 81 aa3.07□□□□□ -1.92
TTC39DP-201ENST00000416781 Q6ZTI0 123 aa3.07□□□□□ -1.92
TTC39DP-201ENST00000416781 LINC00472Q9H8W2 130 aa3.07□□□□□ -1.92
TTC39DP-201ENST00000416781 R4GN34 69 aa3.07□□□□□ -1.92
TTC39DP-201ENST00000416781 GOLGB1Q14789 3259 aaKnown RBP3.07□□□□□ -1.92
TTC39DP-201ENST00000416781 TRGV4A0A0C4DH28 118 aa3.06□□□□□ -1.92
TTC39DP-201ENST00000416781 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
TTC39DP-201ENST00000416781 F5P12259 2224 aa3.05□□□□□ -1.92
TTC39DP-201ENST00000416781 TNRC6CQ9HCJ0 1690 aaKnown RBP3.05□□□□□ -1.92
TTC39DP-201ENST00000416781 IGKV2-40A0A087WW87 121 aaPredicted RBP3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 LOC110117498A0A087WWA1 95 aa3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 IGKV2D-40P01614 121 aaPredicted RBP3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 DEFB112Q30KQ8 113 aa3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 SPINT4Q6UDR6 99 aa3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 COA5Q86WW8 74 aa3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 TRBV6-4A0A1B0GX49 114 aa3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 H0YGX0 51 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms