RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 TRBV7-7A0A0K0K1E9 115 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 A0A1B0GX51 115 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 ZNF815PA8K554 130 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 RNASE13Q5GAN3 156 aaKnown RBP6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 PAPPA-AS1Q5QFB9 102 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 SCGB1D4Q6XE38 83 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 TMEM141Q96I45 108 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 TMEM243Q9BU79 118 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 IMUPQ9GZP8 106 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 CSDC2Q9Y534 153 aaKnown RBP6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 ICOSQ9Y6W8 199 aa6.33□□□□□ -1.4
CHRNA1-206ENST00000416004 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
CHRNA1-206ENST00000416004 HYDINQ4G0P3 5121 aa6.32□□□□□ -1.4
CHRNA1-206ENST00000416004 HERVK_113P61574 105 aa6.32□□□□□ -1.4
CHRNA1-206ENST00000416004 C1orf134Q5TEV5 83 aa6.32□□□□□ -1.4
CHRNA1-206ENST00000416004 ATXN8Q156A1 80 aa6.31□□□□□ -1.4
CHRNA1-206ENST00000416004 CHCHD5Q9BSY4 110 aa6.31□□□□□ -1.4
CHRNA1-206ENST00000416004 PPDPFQ9H3Y8 114 aa6.31□□□□□ -1.4
CHRNA1-206ENST00000416004 A0A0B4J2C4 111 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 C9JAW5 83 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 CFC1BP0CG36 223 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 CFC1P0CG37 223 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 PMVKQ15126 192 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 TIMM21Q9BVV7 248 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 IGLV4-69A0A075B6H9 119 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 TRBV10-2A0A0K0K1G8 114 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 J3KT08 172 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 IGHV3-30P01768 117 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 IGHV3-30-5P0DP03 117 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 Q8N3U1 123 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 UBE2WQ96B02 151 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 AMELXQ99217 191 aa6.3□□□□□ -1.4
CHRNA1-206ENST00000416004 IGLV4-60A0A075B6I1 120 aa6.29□□□□□ -1.4
CHRNA1-206ENST00000416004 H3BT86 120 aa6.29□□□□□ -1.4
CHRNA1-206ENST00000416004 UBE2L6O14933 153 aa6.29□□□□□ -1.4
CHRNA1-206ENST00000416004 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
CHRNA1-206ENST00000416004 LYPD5Q6UWN5 251 aa6.29□□□□□ -1.4
CHRNA1-206ENST00000416004 NTN5Q8WTR8 489 aaPredicted RBP6.29□□□□□ -1.4
CHRNA1-206ENST00000416004 TMEM101Q96IK0 257 aa6.29□□□□□ -1.4
CHRNA1-206ENST00000416004 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 NBDYA0A0U1RRE5 68 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 H7C423 109 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 LINC01620Q4KN68 170 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 TMEM170BQ5T4T1 132 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 DGAT2L7PQ6IED9 249 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 Q9H8V8 135 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 CDC42SE2Q9NRR3 84 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 LINC00588Q9Y4M8 146 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 C11orf86A6NJI1 115 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 UQCRQO14949 82 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 ACYP1P07311 99 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 ESRGQ1W209 222 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 LELP1Q5T871 98 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 PLEKHB2Q96CS7 222 aa6.28□□□□□ -1.4
CHRNA1-206ENST00000416004 A0A0J9YXV3 536 aa6.27□□□□□ -1.41
CHRNA1-206ENST00000416004 IGHV3-33P01772 117 aa6.27□□□□□ -1.41
CHRNA1-206ENST00000416004 Q6ZR54 194 aa6.27□□□□□ -1.41
CHRNA1-206ENST00000416004 C6orf223Q8N319 242 aa6.27□□□□□ -1.41
CHRNA1-206ENST00000416004 C3orf22Q8N5N4 141 aa6.27□□□□□ -1.41
CHRNA1-206ENST00000416004 OR13C6PQ8NH95 151 aa6.27□□□□□ -1.41
CHRNA1-206ENST00000416004 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
CHRNA1-206ENST00000416004 TRBV30A0A0K0K1B3 111 aa6.26□□□□□ -1.41
CHRNA1-206ENST00000416004 TIRAPP58753 221 aa6.26□□□□□ -1.41
CHRNA1-206ENST00000416004 KMT2AQ03164 3969 aa6.26□□□□□ -1.41
CHRNA1-206ENST00000416004 SFTA2Q6UW10 78 aa6.26□□□□□ -1.41
CHRNA1-206ENST00000416004 LINC00526Q96FQ7 95 aa6.26□□□□□ -1.41
CHRNA1-206ENST00000416004 C9orf153Q5TBE3 101 aa6.25□□□□□ -1.41
CHRNA1-206ENST00000416004 WFDC10BQ8IUB3 73 aa6.25□□□□□ -1.41
CHRNA1-206ENST00000416004 TRAV13-1A0A0B4J241 112 aa6.24□□□□□ -1.41
CHRNA1-206ENST00000416004 A0A1B0GUV1 79 aa6.24□□□□□ -1.41
CHRNA1-206ENST00000416004 RTL8CO15255 209 aa6.24□□□□□ -1.41
CHRNA1-206ENST00000416004 COX6A2Q02221 97 aa6.24□□□□□ -1.41
CHRNA1-206ENST00000416004 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
CHRNA1-206ENST00000416004 ZNF22P17026 224 aaPredicted RBP6.24□□□□□ -1.41
CHRNA1-206ENST00000416004 LINC00242Q5T6M2 205 aa6.24□□□□□ -1.41
CHRNA1-206ENST00000416004 CLPSL2Q6UWE3 100 aa6.24□□□□□ -1.41
CHRNA1-206ENST00000416004 VPS13DQ5THJ4 4388 aa6.23□□□□□ -1.41
CHRNA1-206ENST00000416004 TEX49A0A1B0GTD5 131 aa6.23□□□□□ -1.41
CHRNA1-206ENST00000416004 CXCL5P42830 114 aa6.23□□□□□ -1.41
CHRNA1-206ENST00000416004 C2orf82Q6UX34 121 aa6.23□□□□□ -1.41
CHRNA1-206ENST00000416004 DNAH6Q9C0G6 4158 aa6.23□□□□□ -1.41
CHRNA1-206ENST00000416004 TINCRA0A1B0GVN0 87 aa6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 A4D1N5 150 aa6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 LINC00269Q8N2A0 174 aa6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 ANGP03950 147 aaKnown RBP6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 COX6CP09669 75 aa6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 IGHV3-30-3P0DP02 117 aa6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 CRYGAP11844 174 aa6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 LGALS3P17931 250 aaKnown RBP6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 HERVK_113P63121 156 aa6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 FAM19A5Q7Z5A7 132 aaPredicted RBP6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 FAM19A3Q7Z5A8 133 aa6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
CHRNA1-206ENST00000416004 EPPK1P58107 5090 aaKnown RBP6.21□□□□□ -1.41
CHRNA1-206ENST00000416004 IGHV3-64A0A075B6Q5 118 aa6.21□□□□□ -1.42
CHRNA1-206ENST00000416004 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
CHRNA1-206ENST00000416004 FAM236AA0A1B0GUQ0 79 aa6.21□□□□□ -1.42
CHRNA1-206ENST00000416004 LINC00959A0A1B0GUT2 108 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms