RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PLAC8L1A1L4L8 177 aa9.8□□□□□ -0.84
SMARCA4-202ENST00000413806 UNQ6190/PRO20217Q6UXQ8 127 aa9.8□□□□□ -0.84
SMARCA4-202ENST00000413806 LINC01561Q8N1V8 128 aa9.8□□□□□ -0.84
SMARCA4-202ENST00000413806 RAI1Q7Z5J4 1906 aaPredicted RBP9.79□□□□□ -0.84
SMARCA4-202ENST00000413806 PLA2G2AP14555 144 aa9.79□□□□□ -0.84
SMARCA4-202ENST00000413806 SPINK6Q6UWN8 80 aa9.79□□□□□ -0.84
SMARCA4-202ENST00000413806 IGLV4-60A0A075B6I1 120 aa9.79□□□□□ -0.84
SMARCA4-202ENST00000413806 F8WDY8 70 aa9.79□□□□□ -0.84
SMARCA4-202ENST00000413806 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
SMARCA4-202ENST00000413806 ADAMTS20P59510 1910 aa9.78□□□□□ -0.84
SMARCA4-202ENST00000413806 RPL37AP8A6NKH3 93 aa9.78□□□□□ -0.84
SMARCA4-202ENST00000413806 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
SMARCA4-202ENST00000413806 H0Y9P7 68 aa9.78□□□□□ -0.84
SMARCA4-202ENST00000413806 KRTAP10-9P60411 292 aa9.77□□□□□ -0.84
SMARCA4-202ENST00000413806 A0A1B0GUV1 79 aa9.77□□□□□ -0.85
SMARCA4-202ENST00000413806 C1orf137Q5JT78 98 aa9.77□□□□□ -0.85
SMARCA4-202ENST00000413806 PRO0461Q9UI25 63 aa9.77□□□□□ -0.85
SMARCA4-202ENST00000413806 NAV3Q8IVL0 2385 aa9.77□□□□□ -0.85
SMARCA4-202ENST00000413806 LINC00575Q6W349 94 aa9.76□□□□□ -0.85
SMARCA4-202ENST00000413806 Q6ZSN1 163 aa9.76□□□□□ -0.85
SMARCA4-202ENST00000413806 KIF25-AS1Q9Y6Z4 181 aa9.76□□□□□ -0.85
SMARCA4-202ENST00000413806 CXCL6P80162 114 aa9.76□□□□□ -0.85
SMARCA4-202ENST00000413806 CSPG4Q6UVK1 2322 aa9.76□□□□□ -0.85
SMARCA4-202ENST00000413806 hDV103S1A0JD37 113 aa9.75□□□□□ -0.85
SMARCA4-202ENST00000413806 WNK1Q9H4A3 2382 aa9.75□□□□□ -0.85
SMARCA4-202ENST00000413806 C10orf25Q5T742 122 aa9.74□□□□□ -0.85
SMARCA4-202ENST00000413806 PRR3P79522 188 aaKnown RBP9.74□□□□□ -0.85
SMARCA4-202ENST00000413806 C9orf116Q5BN46 136 aaPredicted RBP9.73□□□□□ -0.85
SMARCA4-202ENST00000413806 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
SMARCA4-202ENST00000413806 ARHGAP32A7KAX9 2087 aa9.72□□□□□ -0.85
SMARCA4-202ENST00000413806 CACNA1AO00555 2505 aa9.72□□□□□ -0.85
SMARCA4-202ENST00000413806 BCE1O60756 84 aa9.71□□□□□ -0.85
SMARCA4-202ENST00000413806 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.85
SMARCA4-202ENST00000413806 C2orf48Q96LS8 159 aa9.71□□□□□ -0.85
SMARCA4-202ENST00000413806 HCG22E2RYF7 251 aa9.71□□□□□ -0.85
SMARCA4-202ENST00000413806 REG3GQ6UW15 175 aa9.7□□□□□ -0.86
SMARCA4-202ENST00000413806 IGLV9-49A0A0B4J1Y8 123 aa9.7□□□□□ -0.86
SMARCA4-202ENST00000413806 Q8N2B8 174 aa9.7□□□□□ -0.86
SMARCA4-202ENST00000413806 Q9UF83 564 aa9.69□□□□□ -0.86
SMARCA4-202ENST00000413806 C11orf72Q8NBR9 251 aa9.68□□□□□ -0.86
SMARCA4-202ENST00000413806 SPAG11AQ6PDA7 123 aa9.68□□□□□ -0.86
SMARCA4-202ENST00000413806 SMR3AQ99954 134 aa9.68□□□□□ -0.86
SMARCA4-202ENST00000413806 NAV2Q8IVL1 2488 aa9.68□□□□□ -0.86
SMARCA4-202ENST00000413806 IGLV5-39A0A0G2JS06 123 aa9.68□□□□□ -0.86
SMARCA4-202ENST00000413806 PIEZO1Q92508 2521 aa9.67□□□□□ -0.86
SMARCA4-202ENST00000413806 SMIM29Q86T20 159 aa9.67□□□□□ -0.86
SMARCA4-202ENST00000413806 NUPR2A6NF83 97 aa9.67□□□□□ -0.86
SMARCA4-202ENST00000413806 M0R2N4 97 aa9.66□□□□□ -0.86
SMARCA4-202ENST00000413806 Q6ZTC4 211 aa9.66□□□□□ -0.86
SMARCA4-202ENST00000413806 SBSPONQ8IVN8 264 aa9.66□□□□□ -0.86
SMARCA4-202ENST00000413806 LINC00315P59091 139 aa9.66□□□□□ -0.86
SMARCA4-202ENST00000413806 C6orf223Q8N319 242 aa9.66□□□□□ -0.86
SMARCA4-202ENST00000413806 LYPD5Q6UWN5 251 aa9.65□□□□□ -0.86
SMARCA4-202ENST00000413806 COL4A2P08572 1712 aa9.65□□□□□ -0.86
SMARCA4-202ENST00000413806 IGHV6-1A0A0B4J1U7 121 aa9.65□□□□□ -0.86
SMARCA4-202ENST00000413806 C1orf64Q8NEQ6 169 aa9.65□□□□□ -0.87
SMARCA4-202ENST00000413806 LINC00337Q8N6G1 96 aa9.64□□□□□ -0.87
SMARCA4-202ENST00000413806 DEFB116Q30KQ4 102 aa9.63□□□□□ -0.87
SMARCA4-202ENST00000413806 PTPN13Q12923 2485 aa9.61□□□□□ -0.87
SMARCA4-202ENST00000413806 SORL1Q92673 2214 aa9.61□□□□□ -0.87
SMARCA4-202ENST00000413806 A0A087WSZ3 146 aa9.6□□□□□ -0.87
SMARCA4-202ENST00000413806 SPINK1P00995 79 aa9.6□□□□□ -0.87
SMARCA4-202ENST00000413806 IGLV5-45A0A087WSX0 123 aa9.6□□□□□ -0.87
SMARCA4-202ENST00000413806 A0A1B0GU69 56 aa9.59□□□□□ -0.87
SMARCA4-202ENST00000413806 C8orf87E5RJ46 101 aa9.59□□□□□ -0.87
SMARCA4-202ENST00000413806 LY6G6CO95867 125 aa9.59□□□□□ -0.87
SMARCA4-202ENST00000413806 A8MTW9 85 aa9.59□□□□□ -0.87
SMARCA4-202ENST00000413806 RETNLBQ9BQ08 111 aa9.59□□□□□ -0.87
SMARCA4-202ENST00000413806 SPATA3Q8NHX4 192 aa9.59□□□□□ -0.87
SMARCA4-202ENST00000413806 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
SMARCA4-202ENST00000413806 HIVEP3Q5T1R4 2406 aa9.58□□□□□ -0.88
SMARCA4-202ENST00000413806 TET2Q6N021 2002 aaPredicted RBP9.58□□□□□ -0.88
SMARCA4-202ENST00000413806 IGHV3OR16-9A0A0B4J2B5 98 aa9.57□□□□□ -0.88
SMARCA4-202ENST00000413806 Q9BRP9 147 aa9.57□□□□□ -0.88
SMARCA4-202ENST00000413806 KLK9Q2XQG4 91 aa9.57□□□□□ -0.88
SMARCA4-202ENST00000413806 Q6ZRU5 148 aa9.57□□□□□ -0.88
SMARCA4-202ENST00000413806 PRRC2AP48634 2157 aaKnown RBP9.56□□□□□ -0.88
SMARCA4-202ENST00000413806 CD164Q04900 197 aa9.56□□□□□ -0.88
SMARCA4-202ENST00000413806 FAM218AQ96MZ4 157 aa9.56□□□□□ -0.88
SMARCA4-202ENST00000413806 IGF2RP11717 2491 aa9.55□□□□□ -0.88
SMARCA4-202ENST00000413806 FHL3Q13643 280 aa9.54□□□□□ -0.88
SMARCA4-202ENST00000413806 TM2D3Q9BRN9 247 aa9.54□□□□□ -0.88
SMARCA4-202ENST00000413806 X6R8D5 127 aa9.52□□□□□ -0.88
SMARCA4-202ENST00000413806 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
SMARCA4-202ENST00000413806 IGLV5-52A0A0A0MRZ9 124 aa9.52□□□□□ -0.89
SMARCA4-202ENST00000413806 MYO18BQ8IUG5 2567 aa9.52□□□□□ -0.89
SMARCA4-202ENST00000413806 LINC00336Q6ZUF6 198 aa9.51□□□□□ -0.89
SMARCA4-202ENST00000413806 PIEZO2Q9H5I5 2752 aa9.51□□□□□ -0.89
SMARCA4-202ENST00000413806 NCOR2Q9Y618 2525 aa9.51□□□□□ -0.89
SMARCA4-202ENST00000413806 C2CD3Q4AC94 2353 aa9.51□□□□□ -0.89
SMARCA4-202ENST00000413806 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
SMARCA4-202ENST00000413806 EP400Q96L91 3159 aa9.5□□□□□ -0.89
SMARCA4-202ENST00000413806 PTPRBP23467 1997 aa9.5□□□□□ -0.89
SMARCA4-202ENST00000413806 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
SMARCA4-202ENST00000413806 Q6ZQT0 140 aa9.5□□□□□ -0.89
SMARCA4-202ENST00000413806 CIRBP-AS1Q8TBR5 109 aa9.49□□□□□ -0.89
SMARCA4-202ENST00000413806 ATP11AUNQ6ZP68 121 aa9.49□□□□□ -0.89
SMARCA4-202ENST00000413806 H3BNG1 76 aa9.48□□□□□ -0.89
SMARCA4-202ENST00000413806 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
SMARCA4-202ENST00000413806 CCDC168Q8NDH2 2452 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms