RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 LINC01546A6NGU7 62 aa6.28□□□□□ -1.4
NCKIPSD-202ENST00000413374 TLX1NBP0CAT3 122 aa6.28□□□□□ -1.4
NCKIPSD-202ENST00000413374 NDUFA6P56556 154 aa6.28□□□□□ -1.4
NCKIPSD-202ENST00000413374 SRSF9Q13242 221 aaKnown RBP eCLIP6.28□□□□□ -1.4
NCKIPSD-202ENST00000413374 ODF1Q14990 250 aa6.28□□□□□ -1.4
NCKIPSD-202ENST00000413374 C1orf137Q5JT78 98 aa6.28□□□□□ -1.4
NCKIPSD-202ENST00000413374 SPINK6Q6UWN8 80 aa6.28□□□□□ -1.4
NCKIPSD-202ENST00000413374 FAM19A3Q7Z5A8 133 aa6.28□□□□□ -1.4
NCKIPSD-202ENST00000413374 KRTAP11-1Q8IUC1 163 aa6.28□□□□□ -1.4
NCKIPSD-202ENST00000413374 TNXBP22105 4242 aa6.27□□□□□ -1.41
NCKIPSD-202ENST00000413374 NDUFC2-KCTD14E9PQ53 114 aa6.27□□□□□ -1.41
NCKIPSD-202ENST00000413374 SEC11AP67812 179 aa6.27□□□□□ -1.41
NCKIPSD-202ENST00000413374 PMCHL1Q16048 86 aa6.27□□□□□ -1.41
NCKIPSD-202ENST00000413374 C9orf129Q5T035 196 aaKnown RBP6.27□□□□□ -1.41
NCKIPSD-202ENST00000413374 KRTAP7-1Q8IUC3 87 aa6.27□□□□□ -1.41
NCKIPSD-202ENST00000413374 Q8IZM0 81 aa6.27□□□□□ -1.41
NCKIPSD-202ENST00000413374 CST9LQ9H4G1 147 aa6.27□□□□□ -1.41
NCKIPSD-202ENST00000413374 TINCRA0A1B0GVN0 87 aa6.26□□□□□ -1.41
NCKIPSD-202ENST00000413374 SPINK8P0C7L1 97 aa6.26□□□□□ -1.41
NCKIPSD-202ENST00000413374 NDUFA5Q16718 116 aa6.26□□□□□ -1.41
NCKIPSD-202ENST00000413374 URB1-AS1Q96HZ7 61 aa6.26□□□□□ -1.41
NCKIPSD-202ENST00000413374 SNAPINO95295 136 aa6.25□□□□□ -1.41
NCKIPSD-202ENST00000413374 LINC00614P0C842 121 aa6.25□□□□□ -1.41
NCKIPSD-202ENST00000413374 UBE2BP63146 152 aa6.25□□□□□ -1.41
NCKIPSD-202ENST00000413374 PMVKQ15126 192 aa6.25□□□□□ -1.41
NCKIPSD-202ENST00000413374 SVBPQ8N300 66 aa6.25□□□□□ -1.41
NCKIPSD-202ENST00000413374 C18orf32Q8TCD1 76 aa6.25□□□□□ -1.41
NCKIPSD-202ENST00000413374 LINC01600Q96MT4 127 aa6.25□□□□□ -1.41
NCKIPSD-202ENST00000413374 XAGE1AQ9HD64 81 aa6.25□□□□□ -1.41
NCKIPSD-202ENST00000413374 PLA2G2DQ9UNK4 145 aa6.25□□□□□ -1.41
NCKIPSD-202ENST00000413374 SMIM1B2RUZ4 78 aa6.24□□□□□ -1.41
NCKIPSD-202ENST00000413374 M0QXV9 152 aa6.24□□□□□ -1.41
NCKIPSD-202ENST00000413374 RAB5BP61020 215 aa6.24□□□□□ -1.41
NCKIPSD-202ENST00000413374 REG3GQ6UW15 175 aa6.24□□□□□ -1.41
NCKIPSD-202ENST00000413374 COX7B2Q8TF08 81 aa6.24□□□□□ -1.41
NCKIPSD-202ENST00000413374 A0A096LNJ9 63 aa6.23□□□□□ -1.41
NCKIPSD-202ENST00000413374 LINC01549A6NIU2 74 aa6.23□□□□□ -1.41
NCKIPSD-202ENST00000413374 F8VRH5 84 aa6.23□□□□□ -1.41
NCKIPSD-202ENST00000413374 PDZD11Q5EBL8 140 aa6.23□□□□□ -1.41
NCKIPSD-202ENST00000413374 IGLV7-43P04211 117 aa6.22□□□□□ -1.41
NCKIPSD-202ENST00000413374 C22orf24Q9Y442 160 aa6.22□□□□□ -1.41
NCKIPSD-202ENST00000413374 UBR4Q5T4S7 5183 aa6.22□□□□□ -1.41
NCKIPSD-202ENST00000413374 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
NCKIPSD-202ENST00000413374 HBDP02042 147 aa6.21□□□□□ -1.42
NCKIPSD-202ENST00000413374 KRTAP10-8P60410 259 aa6.21□□□□□ -1.42
NCKIPSD-202ENST00000413374 H3BRM9 83 aa6.2□□□□□ -1.42
NCKIPSD-202ENST00000413374 CXCL5P42830 114 aa6.2□□□□□ -1.42
NCKIPSD-202ENST00000413374 BAGE3Q86Y29 109 aa6.2□□□□□ -1.42
NCKIPSD-202ENST00000413374 CBLN2Q8IUK8 224 aa6.2□□□□□ -1.42
NCKIPSD-202ENST00000413374 SLC7A5P1Q8MH63 180 aa6.2□□□□□ -1.42
NCKIPSD-202ENST00000413374 YPEL4Q96NS1 127 aa6.2□□□□□ -1.42
NCKIPSD-202ENST00000413374 IGLC3P0DOY3 106 aa6.19□□□□□ -1.42
NCKIPSD-202ENST00000413374 ZNF22P17026 224 aaPredicted RBP6.19□□□□□ -1.42
NCKIPSD-202ENST00000413374 PFN2P35080 140 aa6.19□□□□□ -1.42
NCKIPSD-202ENST00000413374 GAGE10A6NGK3 116 aa6.18□□□□□ -1.42
NCKIPSD-202ENST00000413374 ATP5LO75964 103 aa6.18□□□□□ -1.42
NCKIPSD-202ENST00000413374 TMEM170BQ5T4T1 132 aa6.18□□□□□ -1.42
NCKIPSD-202ENST00000413374 DIRC1Q969H9 104 aa6.18□□□□□ -1.42
NCKIPSD-202ENST00000413374 ZNF625Q96I27 306 aaPredicted RBP6.18□□□□□ -1.42
NCKIPSD-202ENST00000413374 C11orf86A6NJI1 115 aa6.17□□□□□ -1.42
NCKIPSD-202ENST00000413374 RPL37AP8A6NKH3 93 aa6.17□□□□□ -1.42
NCKIPSD-202ENST00000413374 LBHQ53QV2 105 aaPredicted RBP6.17□□□□□ -1.42
NCKIPSD-202ENST00000413374 PRR26Q8N8Z3 221 aa6.17□□□□□ -1.42
NCKIPSD-202ENST00000413374 CHTOPQ9Y3Y2 248 aaKnown RBP6.17□□□□□ -1.42
NCKIPSD-202ENST00000413374 H0Y9J4 135 aa6.16□□□□□ -1.42
NCKIPSD-202ENST00000413374 MRPL55Q7Z7F7 128 aaKnown RBP6.16□□□□□ -1.42
NCKIPSD-202ENST00000413374 FAM19A2Q8N3H0 131 aa6.16□□□□□ -1.42
NCKIPSD-202ENST00000413374 IGLV5-39A0A0G2JS06 123 aa6.15□□□□□ -1.42
NCKIPSD-202ENST00000413374 SCO1O75880 301 aa6.15□□□□□ -1.42
NCKIPSD-202ENST00000413374 TRGC2P03986 189 aa6.15□□□□□ -1.42
NCKIPSD-202ENST00000413374 CHCHD1Q96BP2 118 aaKnown RBP6.15□□□□□ -1.42
NCKIPSD-202ENST00000413374 LINC00167Q96N53 147 aa6.15□□□□□ -1.42
NCKIPSD-202ENST00000413374 H0Y8G0 127 aa6.14□□□□□ -1.43
NCKIPSD-202ENST00000413374 IFI27L1Q96BM0 104 aa6.14□□□□□ -1.43
NCKIPSD-202ENST00000413374 A0A0U1RRA0 63 aa6.13□□□□□ -1.43
NCKIPSD-202ENST00000413374 ZNF861PO60384 105 aa6.13□□□□□ -1.43
NCKIPSD-202ENST00000413374 HSBP1O75506 76 aa6.13□□□□□ -1.43
NCKIPSD-202ENST00000413374 NKAPP1Q8N9T2 125 aa6.13□□□□□ -1.43
NCKIPSD-202ENST00000413374 ERG28Q9UKR5 140 aa6.13□□□□□ -1.43
NCKIPSD-202ENST00000413374 NUPR1O60356 82 aa6.12□□□□□ -1.43
NCKIPSD-202ENST00000413374 SND1-IT1Q9HBX3 110 aa6.12□□□□□ -1.43
NCKIPSD-202ENST00000413374 TP73-AS1Q9UF72 201 aa6.12□□□□□ -1.43
NCKIPSD-202ENST00000413374 IGKV2-28A0A075B6P5 120 aa6.11□□□□□ -1.43
NCKIPSD-202ENST00000413374 TMEM223A0PJW6 202 aa6.11□□□□□ -1.43
NCKIPSD-202ENST00000413374 BCE1O60756 84 aa6.11□□□□□ -1.43
NCKIPSD-202ENST00000413374 IGKV2D-28P01615 120 aa6.11□□□□□ -1.43
NCKIPSD-202ENST00000413374 KRTAP1-4P0C5Y4 121 aa6.11□□□□□ -1.43
NCKIPSD-202ENST00000413374 LINC00158P58513 81 aa6.11□□□□□ -1.43
NCKIPSD-202ENST00000413374 TRAV12-1A0A0B4J245 112 aa6.1□□□□□ -1.43
NCKIPSD-202ENST00000413374 SERF1AO75920 110 aa6.1□□□□□ -1.43
NCKIPSD-202ENST00000413374 FABP4P15090 132 aa6.1□□□□□ -1.43
NCKIPSD-202ENST00000413374 IGLV5-37A0A075B6J1 123 aa6.09□□□□□ -1.43
NCKIPSD-202ENST00000413374 COLCA2A8K830 154 aa6.09□□□□□ -1.43
NCKIPSD-202ENST00000413374 RPL28P46779 137 aaKnown RBP6.09□□□□□ -1.43
NCKIPSD-202ENST00000413374 LINC00310P59036 64 aa6.09□□□□□ -1.43
NCKIPSD-202ENST00000413374 Q8NDZ9 215 aa6.09□□□□□ -1.43
NCKIPSD-202ENST00000413374 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
NCKIPSD-202ENST00000413374 LRP2P98164 4655 aa6.08□□□□□ -1.44
NCKIPSD-202ENST00000413374 IGLV1-50A0A075B6I6 118 aa6.08□□□□□ -1.44
NCKIPSD-202ENST00000413374 LEPROTL1O95214 131 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms