RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 Q96MF0 132 aa9.81□□□□□ -0.84
CLTCL1-201ENST00000412649 IGHV3OR16-9A0A0B4J2B5 98 aa9.81□□□□□ -0.84
CLTCL1-201ENST00000412649 TMEM254Q8TBM7 123 aa9.8□□□□□ -0.84
CLTCL1-201ENST00000412649 PRUNE2Q8WUY3 3088 aa9.8□□□□□ -0.84
CLTCL1-201ENST00000412649 XAGE1AQ9HD64 81 aa9.79□□□□□ -0.84
CLTCL1-201ENST00000412649 LINC00575Q6W349 94 aa9.79□□□□□ -0.84
CLTCL1-201ENST00000412649 KLK12Q9UKR0 248 aa9.79□□□□□ -0.84
CLTCL1-201ENST00000412649 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-201ENST00000412649 CXCL6P80162 114 aa9.78□□□□□ -0.84
CLTCL1-201ENST00000412649 PRYO14603 147 aa9.78□□□□□ -0.84
CLTCL1-201ENST00000412649 MP68P56378 58 aa9.78□□□□□ -0.84
CLTCL1-201ENST00000412649 C9orf116Q5BN46 136 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-201ENST00000412649 DSPP15924 2871 aaKnown RBP9.77□□□□□ -0.85
CLTCL1-201ENST00000412649 C3orf84H3BNL1 204 aa9.77□□□□□ -0.85
CLTCL1-201ENST00000412649 HIVEP3Q5T1R4 2406 aa9.76□□□□□ -0.85
CLTCL1-201ENST00000412649 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-201ENST00000412649 CELSR3Q9NYQ7 3312 aa9.76□□□□□ -0.85
CLTCL1-201ENST00000412649 SPEGQ15772 3267 aa9.75□□□□□ -0.85
CLTCL1-201ENST00000412649 ZNF73O43830 326 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-201ENST00000412649 MUC7Q8TAX7 377 aa9.75□□□□□ -0.85
CLTCL1-201ENST00000412649 USP9XQ93008 2570 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-201ENST00000412649 FRYQ5TBA9 3013 aa9.75□□□□□ -0.85
CLTCL1-201ENST00000412649 A8MTW9 85 aa9.75□□□□□ -0.85
CLTCL1-201ENST00000412649 USP9YO00507 2555 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-201ENST00000412649 ETDCA0A1B0GVM5 59 aa9.74□□□□□ -0.85
CLTCL1-201ENST00000412649 LINC00336Q6ZUF6 198 aa9.74□□□□□ -0.85
CLTCL1-201ENST00000412649 TRAV10A0A0B4J240 114 aa9.73□□□□□ -0.85
CLTCL1-201ENST00000412649 Q6ZQT0 140 aa9.73□□□□□ -0.85
CLTCL1-201ENST00000412649 WFDC10AQ9H1F0 79 aa9.73□□□□□ -0.85
CLTCL1-201ENST00000412649 BBC3Q96PG8 261 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-201ENST00000412649 APOC4P55056 127 aa9.73□□□□□ -0.85
CLTCL1-201ENST00000412649 ESRGQ1W209 222 aa9.73□□□□□ -0.85
CLTCL1-201ENST00000412649 DEFB4AO15263 64 aa9.72□□□□□ -0.85
CLTCL1-201ENST00000412649 UNQ6190/PRO20217Q6UXQ8 127 aa9.72□□□□□ -0.85
CLTCL1-201ENST00000412649 FAM104AQ969W3 186 aa9.71□□□□□ -0.85
CLTCL1-201ENST00000412649 SZT2Q5T011 3432 aa9.71□□□□□ -0.85
CLTCL1-201ENST00000412649 FN1P02751 2386 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-201ENST00000412649 LRCOL1A6NCL2 159 aa9.71□□□□□ -0.86
CLTCL1-201ENST00000412649 CELA1Q9UNI1 258 aa9.71□□□□□ -0.86
CLTCL1-201ENST00000412649 NAV2Q8IVL1 2488 aa9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 CYSTM1Q9H1C7 97 aa9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 FAM30AQ9NZY2 134 aa9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 SETD2Q9BYW2 2564 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 CYSRT1A8MQ03 144 aa9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 LINC00482Q8N8I6 264 aa9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 NCOR2Q9Y618 2525 aa9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 FRYLO94915 3013 aa9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 LOC110117498A0A087WWA1 95 aa9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 H7BZZ5 65 aa9.7□□□□□ -0.86
CLTCL1-201ENST00000412649 SEC61GP60059 68 aa9.69□□□□□ -0.86
CLTCL1-201ENST00000412649 KLKP1Q107X0 134 aa9.69□□□□□ -0.86
CLTCL1-201ENST00000412649 UBE2BP63146 152 aa9.69□□□□□ -0.86
CLTCL1-201ENST00000412649 TM2D3Q9BRN9 247 aa9.69□□□□□ -0.86
CLTCL1-201ENST00000412649 A0A1B0GUV1 79 aa9.68□□□□□ -0.86
CLTCL1-201ENST00000412649 IGKV2D-24A0A075B6R9 120 aa9.68□□□□□ -0.86
CLTCL1-201ENST00000412649 SPATA3Q8NHX4 192 aa9.68□□□□□ -0.86
CLTCL1-201ENST00000412649 SONP18583 2426 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-201ENST00000412649 LY6G6DO95868 133 aa9.68□□□□□ -0.86
CLTCL1-201ENST00000412649 PRR4Q16378 134 aa9.68□□□□□ -0.86
CLTCL1-201ENST00000412649 MRPL55Q7Z7F7 128 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-201ENST00000412649 OBSCN-AS1Q96MR7 158 aa9.68□□□□□ -0.86
CLTCL1-201ENST00000412649 TLN2Q9Y4G6 2542 aa9.67□□□□□ -0.86
CLTCL1-201ENST00000412649 SPART-AS1P0CW21 52 aa9.67□□□□□ -0.86
CLTCL1-201ENST00000412649 DEFB135Q30KP9 77 aa9.67□□□□□ -0.86
CLTCL1-201ENST00000412649 C6orf223Q8N319 242 aa9.67□□□□□ -0.86
CLTCL1-201ENST00000412649 SPTSSBQ8NFR3 76 aa9.67□□□□□ -0.86
CLTCL1-201ENST00000412649 M0R378 163 aa9.66□□□□□ -0.86
CLTCL1-201ENST00000412649 Q8N9L7 120 aa9.66□□□□□ -0.86
CLTCL1-201ENST00000412649 LINC01006Q8NI28 216 aa9.66□□□□□ -0.86
CLTCL1-201ENST00000412649 LYRM9A8MSI8 78 aa9.66□□□□□ -0.86
CLTCL1-201ENST00000412649 IGHV4-31P0DP07 118 aa9.65□□□□□ -0.86
CLTCL1-201ENST00000412649 CCDC168Q8NDH2 2452 aa9.65□□□□□ -0.87
CLTCL1-201ENST00000412649 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
CLTCL1-201ENST00000412649 DNAJC9-AS1A6NH13 148 aa9.64□□□□□ -0.87
CLTCL1-201ENST00000412649 Q5XG85 94 aa9.64□□□□□ -0.87
CLTCL1-201ENST00000412649 NDUFB1O75438 58 aa9.63□□□□□ -0.87
CLTCL1-201ENST00000412649 PLA2G2AP14555 144 aa9.62□□□□□ -0.87
CLTCL1-201ENST00000412649 DEFB113Q30KQ7 82 aa9.62□□□□□ -0.87
CLTCL1-201ENST00000412649 PSPHP1O15172 72 aa9.62□□□□□ -0.87
CLTCL1-201ENST00000412649 HIGD2AQ9BW72 106 aa9.61□□□□□ -0.87
CLTCL1-201ENST00000412649 HIVEP2P31629 2446 aa9.59□□□□□ -0.87
CLTCL1-201ENST00000412649 PMAIP1Q13794 54 aa9.59□□□□□ -0.87
CLTCL1-201ENST00000412649 WDFY4Q6ZS81 3184 aa9.58□□□□□ -0.88
CLTCL1-201ENST00000412649 C22orf24Q9Y442 160 aa9.58□□□□□ -0.88
CLTCL1-201ENST00000412649 LELP1Q5T871 98 aa9.58□□□□□ -0.88
CLTCL1-201ENST00000412649 OXTP01178 125 aa9.57□□□□□ -0.88
CLTCL1-201ENST00000412649 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
CLTCL1-201ENST00000412649 JMJD1CQ15652 2540 aa9.57□□□□□ -0.88
CLTCL1-201ENST00000412649 CHKB-CPT1BH3BT56 60 aa9.57□□□□□ -0.88
CLTCL1-201ENST00000412649 PLAC8L1A1L4L8 177 aa9.56□□□□□ -0.88
CLTCL1-201ENST00000412649 REV3LO60673 3130 aa9.56□□□□□ -0.88
CLTCL1-201ENST00000412649 MYO18BQ8IUG5 2567 aa9.56□□□□□ -0.88
CLTCL1-201ENST00000412649 ERC2-IT1O76042 136 aa9.55□□□□□ -0.88
CLTCL1-201ENST00000412649 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
CLTCL1-201ENST00000412649 WFDC13Q8IUB5 93 aa9.55□□□□□ -0.88
CLTCL1-201ENST00000412649 DHRS4-AS1Q9P1J3 65 aa9.55□□□□□ -0.88
CLTCL1-201ENST00000412649 CDK2AP2O75956 126 aa9.55□□□□□ -0.88
CLTCL1-201ENST00000412649 WFDC10BQ8IUB3 73 aa9.55□□□□□ -0.88
CLTCL1-201ENST00000412649 NANOS2P60321 138 aaKnown RBP9.55□□□□□ -0.88
CLTCL1-201ENST00000412649 F8WDY8 70 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms