RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 FA2HQ7L5A8 372 aa10.76□□□□□ -0.69
HSPG2-204ENST00000412328 TRAPPC1Q9Y5R8 145 aa10.76□□□□□ -0.69
HSPG2-204ENST00000412328 TINCRA0A1B0GVN0 87 aa10.75□□□□□ -0.69
HSPG2-204ENST00000412328 SEC11AP67812 179 aa10.75□□□□□ -0.69
HSPG2-204ENST00000412328 CST9LQ9H4G1 147 aa10.74□□□□□ -0.69
HSPG2-204ENST00000412328 C9orf129Q5T035 196 aaKnown RBP10.73□□□□□ -0.69
HSPG2-204ENST00000412328 PHF5AQ7RTV0 110 aaKnown RBP10.73□□□□□ -0.69
HSPG2-204ENST00000412328 KRTAP11-1Q8IUC1 163 aa10.73□□□□□ -0.69
HSPG2-204ENST00000412328 SMCO4Q9NRQ5 59 aa10.73□□□□□ -0.69
HSPG2-204ENST00000412328 NDUFC2-KCTD14E9PQ53 114 aa10.72□□□□□ -0.69
HSPG2-204ENST00000412328 PMVKQ15126 192 aa10.72□□□□□ -0.69
HSPG2-204ENST00000412328 PDZD11Q5EBL8 140 aa10.72□□□□□ -0.69
HSPG2-204ENST00000412328 CBLN2Q8IUK8 224 aa10.72□□□□□ -0.69
HSPG2-204ENST00000412328 GEMIN7Q9H840 131 aaKnown RBP10.72□□□□□ -0.69
HSPG2-204ENST00000412328 LINC00614P0C842 121 aa10.71□□□□□ -0.69
HSPG2-204ENST00000412328 SRSF9Q13242 221 aaKnown RBP eCLIP10.71□□□□□ -0.69
HSPG2-204ENST00000412328 LINC00469Q8N7U9 141 aa10.71□□□□□ -0.69
HSPG2-204ENST00000412328 IGLC3P0DOY3 106 aa10.7□□□□□ -0.7
HSPG2-204ENST00000412328 PMCHL1Q16048 86 aa10.7□□□□□ -0.7
HSPG2-204ENST00000412328 TOMM7Q9P0U1 55 aa10.7□□□□□ -0.7
HSPG2-204ENST00000412328 PSORS1C2Q9UIG4 136 aa10.7□□□□□ -0.7
HSPG2-204ENST00000412328 HBDP02042 147 aa10.69□□□□□ -0.7
HSPG2-204ENST00000412328 GAGE2EQ4V326 116 aa10.69□□□□□ -0.7
HSPG2-204ENST00000412328 GAGE2DQ9UEU5 116 aa10.69□□□□□ -0.7
HSPG2-204ENST00000412328 F8VRH5 84 aa10.68□□□□□ -0.7
HSPG2-204ENST00000412328 PRSS2P07478 247 aa10.68□□□□□ -0.7
HSPG2-204ENST00000412328 FAM19A5Q7Z5A7 132 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-204ENST00000412328 PACRGQ96M98 296 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-204ENST00000412328 CXCL5P42830 114 aa10.67□□□□□ -0.7
HSPG2-204ENST00000412328 SPINK6Q6UWN8 80 aa10.67□□□□□ -0.7
HSPG2-204ENST00000412328 SPINK8P0C7L1 97 aa10.66□□□□□ -0.7
HSPG2-204ENST00000412328 CKS1BP61024 79 aa10.66□□□□□ -0.7
HSPG2-204ENST00000412328 C6orf226Q5I0X4 101 aa10.66□□□□□ -0.7
HSPG2-204ENST00000412328 COX7B2Q8TF08 81 aa10.66□□□□□ -0.7
HSPG2-204ENST00000412328 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
HSPG2-204ENST00000412328 ZNF22P17026 224 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-204ENST00000412328 SERTAD4-AS1Q5TG53 156 aa10.65□□□□□ -0.7
HSPG2-204ENST00000412328 SLC7A5P1Q8MH63 180 aa10.65□□□□□ -0.7
HSPG2-204ENST00000412328 LINC01600Q96MT4 127 aa10.65□□□□□ -0.7
HSPG2-204ENST00000412328 M0QXV9 152 aa10.64□□□□□ -0.71
HSPG2-204ENST00000412328 LINC00310P59036 64 aa10.62□□□□□ -0.71
HSPG2-204ENST00000412328 RAB5BP61020 215 aa10.62□□□□□ -0.71
HSPG2-204ENST00000412328 ODF1Q14990 250 aa10.62□□□□□ -0.71
HSPG2-204ENST00000412328 C11orf86A6NJI1 115 aa10.61□□□□□ -0.71
HSPG2-204ENST00000412328 ATP5LO75964 103 aa10.61□□□□□ -0.71
HSPG2-204ENST00000412328 CHCHD1Q96BP2 118 aaKnown RBP10.61□□□□□ -0.71
HSPG2-204ENST00000412328 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
HSPG2-204ENST00000412328 C1orf137Q5JT78 98 aa10.6□□□□□ -0.71
HSPG2-204ENST00000412328 H3BRM9 83 aa10.59□□□□□ -0.71
HSPG2-204ENST00000412328 IGLV7-43P04211 117 aa10.59□□□□□ -0.71
HSPG2-204ENST00000412328 TRGC2P03986 189 aa10.58□□□□□ -0.72
HSPG2-204ENST00000412328 UBR4Q5T4S7 5183 aa10.57□□□□□ -0.72
HSPG2-204ENST00000412328 NDUFA6P56556 154 aa10.57□□□□□ -0.72
HSPG2-204ENST00000412328 KRTAP10-8P60410 259 aa10.57□□□□□ -0.72
HSPG2-204ENST00000412328 TRAV12-1A0A0B4J245 112 aa10.56□□□□□ -0.72
HSPG2-204ENST00000412328 COLCA2A8K830 154 aa10.56□□□□□ -0.72
HSPG2-204ENST00000412328 REG3GQ6UW15 175 aa10.56□□□□□ -0.72
HSPG2-204ENST00000412328 BAGE3Q86Y29 109 aa10.56□□□□□ -0.72
HSPG2-204ENST00000412328 TP73-AS1Q9UF72 201 aa10.55□□□□□ -0.72
HSPG2-204ENST00000412328 PLA2G2DQ9UNK4 145 aa10.55□□□□□ -0.72
HSPG2-204ENST00000412328 C22orf24Q9Y442 160 aa10.55□□□□□ -0.72
HSPG2-204ENST00000412328 IFI27L1Q96BM0 104 aa10.54□□□□□ -0.72
HSPG2-204ENST00000412328 CHTOPQ9Y3Y2 248 aaKnown RBP10.54□□□□□ -0.72
HSPG2-204ENST00000412328 IGLV5-37A0A075B6J1 123 aa10.53□□□□□ -0.72
HSPG2-204ENST00000412328 UBE2BP63146 152 aa10.53□□□□□ -0.72
HSPG2-204ENST00000412328 FAM19A2Q8N3H0 131 aa10.53□□□□□ -0.72
HSPG2-204ENST00000412328 ZNF625Q96I27 306 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-204ENST00000412328 TMEM223A0PJW6 202 aa10.52□□□□□ -0.73
HSPG2-204ENST00000412328 H0Y9J4 135 aa10.52□□□□□ -0.73
HSPG2-204ENST00000412328 SERF1AO75920 110 aa10.52□□□□□ -0.73
HSPG2-204ENST00000412328 HSBP1O75506 76 aa10.51□□□□□ -0.73
HSPG2-204ENST00000412328 KRTAP1-4P0C5Y4 121 aa10.51□□□□□ -0.73
HSPG2-204ENST00000412328 TMEM170BQ5T4T1 132 aa10.51□□□□□ -0.73
HSPG2-204ENST00000412328 MRPL55Q7Z7F7 128 aaKnown RBP10.51□□□□□ -0.73
HSPG2-204ENST00000412328 NUPR1O60356 82 aa10.5□□□□□ -0.73
HSPG2-204ENST00000412328 ERG28Q9UKR5 140 aa10.5□□□□□ -0.73
HSPG2-204ENST00000412328 Q8NDZ9 215 aa10.49□□□□□ -0.73
HSPG2-204ENST00000412328 DIRC1Q969H9 104 aa10.48□□□□□ -0.73
HSPG2-204ENST00000412328 LINC00167Q96N53 147 aa10.47□□□□□ -0.73
HSPG2-204ENST00000412328 VPREB1P12018 145 aa10.46□□□□□ -0.73
HSPG2-204ENST00000412328 PFN2P35080 140 aa10.46□□□□□ -0.73
HSPG2-204ENST00000412328 COX17Q14061 63 aa10.46□□□□□ -0.73
HSPG2-204ENST00000412328 LBHQ53QV2 105 aaPredicted RBP10.46□□□□□ -0.73
HSPG2-204ENST00000412328 SND1-IT1Q9HBX3 110 aa10.46□□□□□ -0.73
HSPG2-204ENST00000412328 SCO1O75880 301 aa10.45□□□□□ -0.74
HSPG2-204ENST00000412328 SFTA2Q6UW10 78 aa10.45□□□□□ -0.74
HSPG2-204ENST00000412328 LRP2P98164 4655 aa10.45□□□□□ -0.74
HSPG2-204ENST00000412328 KRTAP13-1Q8IUC0 172 aa10.44□□□□□ -0.74
HSPG2-204ENST00000412328 ZNF861PO60384 105 aa10.43□□□□□ -0.74
HSPG2-204ENST00000412328 LEPROTL1O95214 131 aa10.43□□□□□ -0.74
HSPG2-204ENST00000412328 RPL37AP8A6NKH3 93 aa10.42□□□□□ -0.74
HSPG2-204ENST00000412328 TSPEAR-AS2P59090 65 aa10.42□□□□□ -0.74
HSPG2-204ENST00000412328 PRR26Q8N8Z3 221 aa10.42□□□□□ -0.74
HSPG2-204ENST00000412328 GAGE10A6NGK3 116 aa10.41□□□□□ -0.74
HSPG2-204ENST00000412328 BCE1O60756 84 aa10.41□□□□□ -0.74
HSPG2-204ENST00000412328 HIST1H2BKO60814 126 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 HIST1H2BJP06899 126 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 HIST1H2BOP23527 126 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 HIST1H2BBP33778 126 aa10.4□□□□□ -0.74
HSPG2-204ENST00000412328 HIST1H2BDP58876 126 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms