RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TMEM141Q96I45 108 aa9.93□□□□□ -0.82
MRPL55-220ENST00000411464 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
MRPL55-220ENST00000411464 IGLV4-3A0A075B6K6 122 aa9.92□□□□□ -0.82
MRPL55-220ENST00000411464 NUPR1O60356 82 aa9.92□□□□□ -0.82
MRPL55-220ENST00000411464 PRSS2P07478 247 aa9.92□□□□□ -0.82
MRPL55-220ENST00000411464 TEX43Q6ZNM6 134 aa9.92□□□□□ -0.82
MRPL55-220ENST00000411464 COLCA2A8K830 154 aa9.91□□□□□ -0.82
MRPL55-220ENST00000411464 CKS1BP61024 79 aa9.91□□□□□ -0.82
MRPL55-220ENST00000411464 KIAA1644Q3SXP7 199 aa9.91□□□□□ -0.82
MRPL55-220ENST00000411464 LBHQ53QV2 105 aaPredicted RBP9.91□□□□□ -0.82
MRPL55-220ENST00000411464 ORMDL3Q8N138 153 aa9.91□□□□□ -0.82
MRPL55-220ENST00000411464 LINC01561Q8N1V8 128 aa9.91□□□□□ -0.82
MRPL55-220ENST00000411464 KRTAP9-2Q9BYQ4 174 aa9.91□□□□□ -0.82
MRPL55-220ENST00000411464 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
MRPL55-220ENST00000411464 TRAPPC1Q9Y5R8 145 aa9.91□□□□□ -0.82
MRPL55-220ENST00000411464 FABP9Q0Z7S8 132 aa9.9□□□□□ -0.82
MRPL55-220ENST00000411464 PRELID3AQ96N28 172 aa9.9□□□□□ -0.82
MRPL55-220ENST00000411464 C2orf88Q9BSF0 95 aa9.9□□□□□ -0.82
MRPL55-220ENST00000411464 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
MRPL55-220ENST00000411464 Q6ZN92 141 aa9.89□□□□□ -0.83
MRPL55-220ENST00000411464 LINC00469Q8N7U9 141 aa9.89□□□□□ -0.83
MRPL55-220ENST00000411464 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
MRPL55-220ENST00000411464 XAGE1AQ9HD64 81 aa9.88□□□□□ -0.83
MRPL55-220ENST00000411464 RPL28P46779 137 aaKnown RBP9.87□□□□□ -0.83
MRPL55-220ENST00000411464 VCX2Q9H322 139 aa9.87□□□□□ -0.83
MRPL55-220ENST00000411464 LOC389332A0A1B0GUA5 103 aa9.86□□□□□ -0.83
MRPL55-220ENST00000411464 CRYGAP11844 174 aa9.86□□□□□ -0.83
MRPL55-220ENST00000411464 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
MRPL55-220ENST00000411464 ALKBH7Q9BT30 221 aaPredicted RBP9.86□□□□□ -0.83
MRPL55-220ENST00000411464 LAMTOR2Q9Y2Q5 125 aa9.86□□□□□ -0.83
MRPL55-220ENST00000411464 A0A087X002 238 aa9.85□□□□□ -0.83
MRPL55-220ENST00000411464 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
MRPL55-220ENST00000411464 Q8IZM0 81 aa9.85□□□□□ -0.83
MRPL55-220ENST00000411464 CYSLTR1Q9Y271 337 aa9.85□□□□□ -0.83
MRPL55-220ENST00000411464 BCE1O60756 84 aa9.84□□□□□ -0.83
MRPL55-220ENST00000411464 MRPL55Q7Z7F7 128 aaKnown RBP9.84□□□□□ -0.83
MRPL55-220ENST00000411464 MAP1LC3AQ9H492 121 aa9.84□□□□□ -0.83
MRPL55-220ENST00000411464 TP73-AS1Q9UF72 201 aa9.84□□□□□ -0.83
MRPL55-220ENST00000411464 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
MRPL55-220ENST00000411464 TRGC2P03986 189 aa9.83□□□□□ -0.84
MRPL55-220ENST00000411464 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
MRPL55-220ENST00000411464 AMELXQ99217 191 aa9.83□□□□□ -0.84
MRPL55-220ENST00000411464 F8VRH5 84 aa9.82□□□□□ -0.84
MRPL55-220ENST00000411464 LINC00173Q6ZV60 143 aa9.82□□□□□ -0.84
MRPL55-220ENST00000411464 NPSP0C0P6 89 aa9.81□□□□□ -0.84
MRPL55-220ENST00000411464 SEC11AP67812 179 aa9.81□□□□□ -0.84
MRPL55-220ENST00000411464 ORMDL2Q53FV1 153 aa9.8□□□□□ -0.84
MRPL55-220ENST00000411464 Q8N8P6 123 aa9.8□□□□□ -0.84
MRPL55-220ENST00000411464 RPL37AP8A6NKH3 93 aa9.79□□□□□ -0.84
MRPL55-220ENST00000411464 HERVK_113P63121 156 aa9.79□□□□□ -0.84
MRPL55-220ENST00000411464 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
MRPL55-220ENST00000411464 LCE2AQ5TA79 106 aaPredicted RBP9.79□□□□□ -0.84
MRPL55-220ENST00000411464 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
MRPL55-220ENST00000411464 C18orf32Q8TCD1 76 aa9.79□□□□□ -0.84
MRPL55-220ENST00000411464 LINC00167Q96N53 147 aa9.79□□□□□ -0.84
MRPL55-220ENST00000411464 GEMIN7Q9H840 131 aaKnown RBP9.79□□□□□ -0.84
MRPL55-220ENST00000411464 ANAPC11Q9NYG5 84 aa9.79□□□□□ -0.84
MRPL55-220ENST00000411464 CDKN2A-AS1Q9UH64 79 aa9.79□□□□□ -0.84
MRPL55-220ENST00000411464 IGIPA6NJ69 53 aa9.78□□□□□ -0.84
MRPL55-220ENST00000411464 NXT2Q9NPJ8 142 aaKnown RBP9.78□□□□□ -0.84
MRPL55-220ENST00000411464 CXCL5P42830 114 aa9.77□□□□□ -0.85
MRPL55-220ENST00000411464 K7EMI3 77 aa9.76□□□□□ -0.85
MRPL55-220ENST00000411464 UBE2AP49459 152 aa9.76□□□□□ -0.85
MRPL55-220ENST00000411464 RETNLBQ9BQ08 111 aa9.76□□□□□ -0.85
MRPL55-220ENST00000411464 GAGE10A6NGK3 116 aa9.75□□□□□ -0.85
MRPL55-220ENST00000411464 G0S2P27469 103 aa9.75□□□□□ -0.85
MRPL55-220ENST00000411464 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
MRPL55-220ENST00000411464 CDIP1Q9H305 208 aa9.75□□□□□ -0.85
MRPL55-220ENST00000411464 KRTAP13-2Q52LG2 175 aa9.74□□□□□ -0.85
MRPL55-220ENST00000411464 URB1-AS1Q96HZ7 61 aa9.74□□□□□ -0.85
MRPL55-220ENST00000411464 FAT4Q6V0I7 4981 aa9.73□□□□□ -0.85
MRPL55-220ENST00000411464 LINC01546A6NGU7 62 aa9.73□□□□□ -0.85
MRPL55-220ENST00000411464 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
MRPL55-220ENST00000411464 LINC00304Q8N9R0 145 aa9.73□□□□□ -0.85
MRPL55-220ENST00000411464 NKAPP1Q8N9T2 125 aa9.72□□□□□ -0.85
MRPL55-220ENST00000411464 TIMM17AQ99595 171 aa9.72□□□□□ -0.85
MRPL55-220ENST00000411464 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST1H2BKO60814 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST1H2BJP06899 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 LINC00614P0C842 121 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST1H2BOP23527 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST1H2BBP33778 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST1H2BDP58876 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 RAB5BP61020 215 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST1H2BCP62807 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST2H2BEQ16778 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.71□□□□□ -0.86
MRPL55-220ENST00000411464 BAGE3Q86Y29 109 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 COX7B2Q8TF08 81 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST1H2BHQ93079 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST1H2BNQ99877 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 HIST1H2BMQ99879 126 aa9.71□□□□□ -0.86
MRPL55-220ENST00000411464 IGLV7-46A0A075B6I9 117 aa9.7□□□□□ -0.86
MRPL55-220ENST00000411464 IGLV5-37A0A075B6J1 123 aa9.7□□□□□ -0.86
MRPL55-220ENST00000411464 KRTAP9-6A0A140TA67 174 aa9.7□□□□□ -0.86
MRPL55-220ENST00000411464 SMIM1B2RUZ4 78 aa9.7□□□□□ -0.86
MRPL55-220ENST00000411464 TPRXLQ17RH7 258 aa9.7□□□□□ -0.86
MRPL55-220ENST00000411464 PDZD11Q5EBL8 140 aa9.7□□□□□ -0.86
MRPL55-220ENST00000411464 KRTAP13-1Q8IUC0 172 aa9.7□□□□□ -0.86
MRPL55-220ENST00000411464 TOMM6Q96B49 74 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms