RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 IGLC1P0CG04 106 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 MT1XP80297 61 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 LCN9Q8WX39 176 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 MRPL34Q9BQ48 92 aaKnown RBP-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 PRO1933Q9H354 126 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 FAIMQ9NVQ4 179 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 CDKN2A-AS1Q9UH64 79 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 XRN1Q8IZH2 1706 aaKnown RBP-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 C1orf167Q5SNV9 1468 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 DNAH10Q8IVF4 4471 aa-1.58□□□□□ -2.66
RNU4-55P-201ENST00000410731 MYH7P12883 1935 aa-1.59□□□□□ -2.66
RNU4-55P-201ENST00000410731 PIGBOS1A0A0B4J2F0 54 aa-1.59□□□□□ -2.66
RNU4-55P-201ENST00000410731 CCL22O00626 93 aa-1.59□□□□□ -2.66
RNU4-55P-201ENST00000410731 S100GP29377 79 aa-1.59□□□□□ -2.66
RNU4-55P-201ENST00000410731 SEC11AP67812 179 aa-1.59□□□□□ -2.66
RNU4-55P-201ENST00000410731 KRTAP19-5Q3LI72 72 aa-1.59□□□□□ -2.66
RNU4-55P-201ENST00000410731 MRPL54Q6P161 138 aaKnown RBP-1.59□□□□□ -2.66
RNU4-55P-201ENST00000410731 QRICH2Q9H0J4 1663 aa-1.59□□□□□ -2.66
RNU4-55P-201ENST00000410731 SPTAN1Q13813 2472 aaKnown RBP-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 MYOM1P52179 1685 aa-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 SPEF2Q9C093 1822 aa-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 LOC100130705A0A1B0GUX0 176 aa-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 IGLC6P0CF74 106 aa-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 HIST1H1DP16402 221 aaKnown RBP-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 WHAMMP3Q1A5X7 153 aa-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 SKA2Q8WVK7 121 aaPredicted RBP-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 TSLPQ969D9 159 aa-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 NXT2Q9NPJ8 142 aaKnown RBP-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 HIGD1BQ9P298 99 aa-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 S4R3F8 94 aa-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 BPTFQ12830 3046 aa-1.6□□□□□ -2.67
RNU4-55P-201ENST00000410731 DEFB110Q30KQ9 67 aa-1.61□□□□□ -2.67
RNU4-55P-201ENST00000410731 NCOA3Q9Y6Q9 1424 aa-1.61□□□□□ -2.67
RNU4-55P-201ENST00000410731 TET3O43151 1660 aa-1.61□□□□□ -2.67
RNU4-55P-201ENST00000410731 KNDC1Q76NI1 1749 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 ARHGEF5Q12774 1597 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 OVOS2A0A0J9YW53 1432 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 OVOS2Q6IE36 1432 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 A0A1B0GV72 72 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 G0S2P27469 103 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 MORN2Q502X0 79 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 FAM223AQ8IWN6 122 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 SMPXQ9UHP9 88 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 MAP3K1Q13233 1512 aa-1.62□□□□□ -2.67
RNU4-55P-201ENST00000410731 PLEKHH2Q8IVE3 1493 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 NLRP1Q9C000 1473 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 A0A1B0GU69 56 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 E5RI56 91 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 DBIP07108 87 aaKnown RBP-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 MT1HL1P0DM35 61 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 LINC00694P0DN24 101 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 CCDC153Q494R4 210 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 KCNRGQ8N5I3 272 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 MYOZ3Q8TDC0 251 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 TMEM191AQ9H0A3 160 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 TPT1P8Q9HAU6 139 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 COPZ2Q9P299 210 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 ARL2-SNX15V9GYD0 113 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 V9GYQ6 96 aa-1.63□□□□□ -2.67
RNU4-55P-201ENST00000410731 PDCD11Q14690 1871 aaKnown RBP-1.64□□□□□ -2.67
RNU4-55P-201ENST00000410731 GUCA1AP43080 201 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-55P-201ENST00000410731 GNG10P50151 68 aa-1.64□□□□□ -2.67
RNU4-55P-201ENST00000410731 SPANXCQ9NY87 97 aa-1.64□□□□□ -2.67
RNU4-55P-201ENST00000410731 ANKRD36A6QL64 1941 aa-1.64□□□□□ -2.67
RNU4-55P-201ENST00000410731 TCHHQ07283 1943 aa-1.64□□□□□ -2.67
RNU4-55P-201ENST00000410731 KIAA1551Q9HCM1 1747 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 CHKB-CPT1BH3BT56 60 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 TSPAN19P0C672 248 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 FGF7P21781 194 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 SNCAP37840 140 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 C12orf73Q69YU5 71 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 AIF1LQ9BQI0 150 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 GINS2Q9Y248 185 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 HSPB11Q9Y547 144 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 BCORQ6W2J9 1755 aa-1.65□□□□□ -2.67
RNU4-55P-201ENST00000410731 CLIP1P30622 1438 aa-1.66□□□□□ -2.67
RNU4-55P-201ENST00000410731 EDC4Q6P2E9 1401 aaKnown RBP-1.66□□□□□ -2.67
RNU4-55P-201ENST00000410731 PBRM1Q86U86 1689 aa-1.66□□□□□ -2.68
RNU4-55P-201ENST00000410731 TSTD3H0UI37 97 aa-1.66□□□□□ -2.68
RNU4-55P-201ENST00000410731 J3QR89 54 aa-1.66□□□□□ -2.68
RNU4-55P-201ENST00000410731 C5orf38Q86SI9 138 aa-1.66□□□□□ -2.68
RNU4-55P-201ENST00000410731 SELENOSQ9BQE4 189 aa-1.66□□□□□ -2.68
RNU4-55P-201ENST00000410731 CENPHQ9H3R5 247 aa-1.66□□□□□ -2.68
RNU4-55P-201ENST00000410731 UQCR10Q9UDW1 63 aa-1.66□□□□□ -2.68
RNU4-55P-201ENST00000410731 LRRC37AA6NMS7 1700 aa-1.66□□□□□ -2.68
RNU4-55P-201ENST00000410731 SMG6Q86US8 1419 aaKnown RBP-1.66□□□□□ -2.68
RNU4-55P-201ENST00000410731 ADGRL2O95490 1459 aa-1.67□□□□□ -2.68
RNU4-55P-201ENST00000410731 A0A1B0GWA3 101 aa-1.67□□□□□ -2.68
RNU4-55P-201ENST00000410731 C9orf153Q5TBE3 101 aa-1.67□□□□□ -2.68
RNU4-55P-201ENST00000410731 DDA1Q9BW61 102 aa-1.67□□□□□ -2.68
RNU4-55P-201ENST00000410731 SMIM3Q9BZL3 60 aa-1.67□□□□□ -2.68
RNU4-55P-201ENST00000410731 NUP188Q5SRE5 1749 aa-1.67□□□□□ -2.68
RNU4-55P-201ENST00000410731 EHBP1L1Q8N3D4 1523 aa-1.67□□□□□ -2.68
RNU4-55P-201ENST00000410731 SCN7AQ01118 1682 aa-1.67□□□□□ -2.68
RNU4-55P-201ENST00000410731 MBD5Q9P267 1494 aa-1.68□□□□□ -2.68
RNU4-55P-201ENST00000410731 SPTY2D1-AS1A0A0U1RR47 76 aa-1.68□□□□□ -2.68
RNU4-55P-201ENST00000410731 K7ERU9 68 aa-1.68□□□□□ -2.68
RNU4-55P-201ENST00000410731 C6orf201Q7Z4U5 140 aa-1.68□□□□□ -2.68
RNU4-55P-201ENST00000410731 RGPD2P0DJD1 1756 aa-1.68□□□□□ -2.68
RNU4-55P-201ENST00000410731 FAM223BA6NKX1 122 aa-1.69□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms