RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 B9D2Q9BPU9 175 aa12.59□□□□□ -0.39
SMPD4-202ENST00000409031 PSPHP1O15172 72 aa12.58□□□□□ -0.4
SMPD4-202ENST00000409031 ODF3L2Q3SX64 289 aa12.58□□□□□ -0.4
SMPD4-202ENST00000409031 C9orf116Q5BN46 136 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-202ENST00000409031 CCDC168Q8NDH2 2452 aa12.57□□□□□ -0.4
SMPD4-202ENST00000409031 C19orf84I3L1E1 186 aa12.56□□□□□ -0.4
SMPD4-202ENST00000409031 PRR15LQ9BU68 103 aa12.56□□□□□ -0.4
SMPD4-202ENST00000409031 LINC01561Q8N1V8 128 aa12.56□□□□□ -0.4
SMPD4-202ENST00000409031 LINC00208Q96KT6 92 aa12.56□□□□□ -0.4
SMPD4-202ENST00000409031 CENPFP49454 3210 aa12.56□□□□□ -0.4
SMPD4-202ENST00000409031 IGF2RP11717 2491 aa12.56□□□□□ -0.4
SMPD4-202ENST00000409031 LITAFQ99732 161 aa12.55□□□□□ -0.4
SMPD4-202ENST00000409031 HIVEP3Q5T1R4 2406 aa12.54□□□□□ -0.4
SMPD4-202ENST00000409031 Q8N9L7 120 aa12.54□□□□□ -0.4
SMPD4-202ENST00000409031 RETNQ9HD89 108 aa12.54□□□□□ -0.4
SMPD4-202ENST00000409031 EGFEM1PQ0D2K5 195 aa12.54□□□□□ -0.4
SMPD4-202ENST00000409031 C1orf137Q5JT78 98 aa12.54□□□□□ -0.4
SMPD4-202ENST00000409031 C18orf65Q6ZTR6 163 aa12.54□□□□□ -0.4
SMPD4-202ENST00000409031 SMCR5Q8TEV8 140 aa12.53□□□□□ -0.4
SMPD4-202ENST00000409031 A0A1B0GUV1 79 aa12.53□□□□□ -0.4
SMPD4-202ENST00000409031 WFDC10AQ9H1F0 79 aa12.53□□□□□ -0.4
SMPD4-202ENST00000409031 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.4
SMPD4-202ENST00000409031 IGKV2-24A0A0C4DH68 120 aa12.52□□□□□ -0.41
SMPD4-202ENST00000409031 IGHV3OR16-9A0A0B4J2B5 98 aa12.51□□□□□ -0.41
SMPD4-202ENST00000409031 A0A096LNI7 61 aa12.5□□□□□ -0.41
SMPD4-202ENST00000409031 RAI1Q7Z5J4 1906 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-202ENST00000409031 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
SMPD4-202ENST00000409031 A0A0J9YWU9 116 aa12.49□□□□□ -0.41
SMPD4-202ENST00000409031 FHL2Q14192 279 aa12.49□□□□□ -0.41
SMPD4-202ENST00000409031 USP9XQ93008 2570 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-202ENST00000409031 LINC01006Q8NI28 216 aa12.47□□□□□ -0.41
SMPD4-202ENST00000409031 FN1P02751 2386 aaKnown RBP12.46□□□□□ -0.41
SMPD4-202ENST00000409031 ABCA2Q9BZC7 2435 aa12.46□□□□□ -0.41
SMPD4-202ENST00000409031 SPATA3Q8NHX4 192 aa12.46□□□□□ -0.41
SMPD4-202ENST00000409031 C11orf72Q8NBR9 251 aa12.45□□□□□ -0.42
SMPD4-202ENST00000409031 A8MTW9 85 aa12.45□□□□□ -0.42
SMPD4-202ENST00000409031 C14orf177Q52M58 125 aa12.45□□□□□ -0.42
SMPD4-202ENST00000409031 AVPP01185 164 aa12.44□□□□□ -0.42
SMPD4-202ENST00000409031 hDV103S1A0JD37 113 aa12.44□□□□□ -0.42
SMPD4-202ENST00000409031 J3QKU1 62 aa12.43□□□□□ -0.42
SMPD4-202ENST00000409031 RPL37AP8A6NKH3 93 aa12.43□□□□□ -0.42
SMPD4-202ENST00000409031 LIMD2Q9BT23 127 aa12.43□□□□□ -0.42
SMPD4-202ENST00000409031 LINC00482Q8N8I6 264 aa12.43□□□□□ -0.42
SMPD4-202ENST00000409031 PLAC8L1A1L4L8 177 aa12.42□□□□□ -0.42
SMPD4-202ENST00000409031 Q6ZQT0 140 aa12.42□□□□□ -0.42
SMPD4-202ENST00000409031 LOC110117498A0A087WWA1 95 aa12.42□□□□□ -0.42
SMPD4-202ENST00000409031 C11orf45Q8TAV5 145 aa12.42□□□□□ -0.42
SMPD4-202ENST00000409031 CASC2Q6XLA1 102 aa12.42□□□□□ -0.42
SMPD4-202ENST00000409031 CDSNQ15517 529 aa12.41□□□□□ -0.42
SMPD4-202ENST00000409031 UTRNP46939 3433 aa12.4□□□□□ -0.42
SMPD4-202ENST00000409031 DEFB131BA0A096LNP1 70 aa12.39□□□□□ -0.43
SMPD4-202ENST00000409031 USP9YO00507 2555 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-202ENST00000409031 TLN2Q9Y4G6 2542 aa12.39□□□□□ -0.43
SMPD4-202ENST00000409031 SETD2Q9BYW2 2564 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-202ENST00000409031 TRAV10A0A0B4J240 114 aa12.38□□□□□ -0.43
SMPD4-202ENST00000409031 KPRPQ5T749 579 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-202ENST00000409031 C6orf223Q8N319 242 aa12.38□□□□□ -0.43
SMPD4-202ENST00000409031 HCG22E2RYF7 251 aa12.38□□□□□ -0.43
SMPD4-202ENST00000409031 C10orf25Q5T742 122 aa12.38□□□□□ -0.43
SMPD4-202ENST00000409031 COL4A2P08572 1712 aa12.38□□□□□ -0.43
SMPD4-202ENST00000409031 KLK9Q2XQG4 91 aa12.37□□□□□ -0.43
SMPD4-202ENST00000409031 CEP295Q9C0D2 2601 aa12.37□□□□□ -0.43
SMPD4-202ENST00000409031 TM2D3Q9BRN9 247 aa12.36□□□□□ -0.43
SMPD4-202ENST00000409031 Q9UF83 564 aa12.36□□□□□ -0.43
SMPD4-202ENST00000409031 H0Y9P7 68 aa12.36□□□□□ -0.43
SMPD4-202ENST00000409031 SMIM29Q86T20 159 aa12.35□□□□□ -0.43
SMPD4-202ENST00000409031 A0A1B0GW54 56 aa12.34□□□□□ -0.43
SMPD4-202ENST00000409031 IGLV1-51P01701 117 aa12.33□□□□□ -0.44
SMPD4-202ENST00000409031 KLKP1Q107X0 134 aa12.33□□□□□ -0.44
SMPD4-202ENST00000409031 K7ERS5 55 aa12.33□□□□□ -0.44
SMPD4-202ENST00000409031 PKD1L2Q7Z442 2459 aa12.33□□□□□ -0.44
SMPD4-202ENST00000409031 A0A1W2PPR1 153 aa12.32□□□□□ -0.44
SMPD4-202ENST00000409031 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
SMPD4-202ENST00000409031 LINC01600Q96MT4 127 aa12.32□□□□□ -0.44
SMPD4-202ENST00000409031 F8WDY8 70 aa12.32□□□□□ -0.44
SMPD4-202ENST00000409031 LINC00336Q6ZUF6 198 aa12.32□□□□□ -0.44
SMPD4-202ENST00000409031 C2orf48Q96LS8 159 aa12.31□□□□□ -0.44
SMPD4-202ENST00000409031 MUC4Q99102 2169 aa12.31□□□□□ -0.44
SMPD4-202ENST00000409031 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-202ENST00000409031 ZNF462Q96JM2 2506 aa12.3□□□□□ -0.44
SMPD4-202ENST00000409031 SPTBN4Q9H254 2564 aa12.29□□□□□ -0.44
SMPD4-202ENST00000409031 A0A087WSZ3 146 aa12.29□□□□□ -0.44
SMPD4-202ENST00000409031 WIPF1O43516 503 aa12.28□□□□□ -0.44
SMPD4-202ENST00000409031 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-202ENST00000409031 C4orf48Q5BLP8 95 aa12.27□□□□□ -0.44
SMPD4-202ENST00000409031 ABCA12Q86UK0 2595 aa12.27□□□□□ -0.44
SMPD4-202ENST00000409031 PCOTHQ58A44 107 aa12.25□□□□□ -0.45
SMPD4-202ENST00000409031 REG3GQ6UW15 175 aa12.25□□□□□ -0.45
SMPD4-202ENST00000409031 ANKRD11Q6UB99 2663 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-202ENST00000409031 DOPEY1Q5JWR5 2465 aa12.24□□□□□ -0.45
SMPD4-202ENST00000409031 H7BZZ5 65 aa12.24□□□□□ -0.45
SMPD4-202ENST00000409031 C1orf64Q8NEQ6 169 aa12.24□□□□□ -0.45
SMPD4-202ENST00000409031 KIAA0087Q14695 138 aa12.23□□□□□ -0.45
SMPD4-202ENST00000409031 ELOF1P60002 83 aaKnown RBP12.22□□□□□ -0.45
SMPD4-202ENST00000409031 LINC00474Q9P2X8 69 aa12.22□□□□□ -0.45
SMPD4-202ENST00000409031 ZNF706Q9Y5V0 76 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-202ENST00000409031 LY6G6DO95868 133 aa12.22□□□□□ -0.45
SMPD4-202ENST00000409031 SPINK6Q6UWN8 80 aa12.21□□□□□ -0.46
SMPD4-202ENST00000409031 Q6ZRU5 148 aa12.21□□□□□ -0.46
SMPD4-202ENST00000409031 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms