RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 GAGE6Q13070 117 aa8.99□□□□□ -0.97
SMARCB1-203ENST00000407082 LINC01561Q8N1V8 128 aa8.99□□□□□ -0.97
SMARCB1-203ENST00000407082 PRO0461Q9UI25 63 aa8.99□□□□□ -0.97
SMARCB1-203ENST00000407082 X6R8D5 127 aa8.99□□□□□ -0.97
SMARCB1-203ENST00000407082 GYPEP15421 78 aa8.98□□□□□ -0.97
SMARCB1-203ENST00000407082 SS18Q15532 418 aa8.98□□□□□ -0.97
SMARCB1-203ENST00000407082 MEIG1Q5JSS6 88 aa8.98□□□□□ -0.97
SMARCB1-203ENST00000407082 LOC100131303A0A0U1RQF7 123 aa8.97□□□□□ -0.97
SMARCB1-203ENST00000407082 F5H768 121 aa8.97□□□□□ -0.97
SMARCB1-203ENST00000407082 PAX4O43316 350 aa8.97□□□□□ -0.97
SMARCB1-203ENST00000407082 TCL1BO95988 128 aa8.97□□□□□ -0.97
SMARCB1-203ENST00000407082 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
SMARCB1-203ENST00000407082 TRAV26-1A0A087WT03 109 aa8.96□□□□□ -0.98
SMARCB1-203ENST00000407082 DAD1P61803 113 aa8.96□□□□□ -0.98
SMARCB1-203ENST00000407082 ETDBQ3ZM63 59 aa8.96□□□□□ -0.98
SMARCB1-203ENST00000407082 ADAMTSL4-AS1Q5T5F5 129 aa8.96□□□□□ -0.98
SMARCB1-203ENST00000407082 ATP5G1P05496 136 aa8.95□□□□□ -0.98
SMARCB1-203ENST00000407082 FAM222AQ5U5X8 452 aa8.95□□□□□ -0.98
SMARCB1-203ENST00000407082 LINC00308Q8TCZ7 52 aa8.95□□□□□ -0.98
SMARCB1-203ENST00000407082 PPDPFLQ8WWR9 84 aa8.95□□□□□ -0.98
SMARCB1-203ENST00000407082 ZNF625Q96I27 306 aaPredicted RBP8.95□□□□□ -0.98
SMARCB1-203ENST00000407082 ICOSQ9Y6W8 199 aa8.95□□□□□ -0.98
SMARCB1-203ENST00000407082 KIAA1109Q2LD37 5005 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 A0A087WZ39 114 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 IGHV4-28A0A0C4DH34 117 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 A0A0J9YWU9 116 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 TMEM262E9PQX1 116 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 H7C2G1 150 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 DEFB4AO15263 64 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 SPART-AS1P0CW21 52 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 TEN1Q86WV5 123 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 Q8NAQ8 132 aa8.94□□□□□ -0.98
SMARCB1-203ENST00000407082 NUPR2A6NF83 97 aa8.93□□□□□ -0.98
SMARCB1-203ENST00000407082 PCP4P48539 62 aa8.93□□□□□ -0.98
SMARCB1-203ENST00000407082 FOXI1Q12951 378 aa8.93□□□□□ -0.98
SMARCB1-203ENST00000407082 LINC01600Q96MT4 127 aa8.93□□□□□ -0.98
SMARCB1-203ENST00000407082 TRAV13-2A0A0B4J235 113 aa8.92□□□□□ -0.98
SMARCB1-203ENST00000407082 LINC00959A0A1B0GUT2 108 aa8.92□□□□□ -0.98
SMARCB1-203ENST00000407082 SLC25A20O43772 301 aa8.92□□□□□ -0.98
SMARCB1-203ENST00000407082 RPL13AP40429 203 aaKnown RBP8.92□□□□□ -0.98
SMARCB1-203ENST00000407082 MRPL23Q16540 153 aaKnown RBP8.92□□□□□ -0.98
SMARCB1-203ENST00000407082 KLK5Q9Y337 293 aaPredicted RBP8.92□□□□□ -0.98
SMARCB1-203ENST00000407082 IGLV4-60A0A075B6I1 120 aa8.91□□□□□ -0.98
SMARCB1-203ENST00000407082 IGHV3OR16-9A0A0B4J2B5 98 aa8.91□□□□□ -0.98
SMARCB1-203ENST00000407082 IBA57-AS1B1ANH7 110 aa8.91□□□□□ -0.98
SMARCB1-203ENST00000407082 LINC01620Q4KN68 170 aa8.91□□□□□ -0.98
SMARCB1-203ENST00000407082 C11orf68Q9H3H3 251 aaKnown RBP8.91□□□□□ -0.98
SMARCB1-203ENST00000407082 TRBV10-2A0A0K0K1G8 114 aa8.9□□□□□ -0.98
SMARCB1-203ENST00000407082 C9JAW5 83 aa8.9□□□□□ -0.98
SMARCB1-203ENST00000407082 H3BT86 120 aa8.9□□□□□ -0.98
SMARCB1-203ENST00000407082 TRIAP1O43715 76 aa8.9□□□□□ -0.98
SMARCB1-203ENST00000407082 ANKRD29Q8N6D5 301 aa8.9□□□□□ -0.98
SMARCB1-203ENST00000407082 SIGMAR1Q99720 223 aa8.9□□□□□ -0.98
SMARCB1-203ENST00000407082 IGKV3OR2-268A0A0C4DH90 116 aa8.89□□□□□ -0.99
SMARCB1-203ENST00000407082 GAGE12HA6NDE8 117 aa8.89□□□□□ -0.99
SMARCB1-203ENST00000407082 EIF4EBP3O60516 100 aaPredicted RBP8.89□□□□□ -0.99
SMARCB1-203ENST00000407082 SCGB1A1P11684 91 aa8.89□□□□□ -0.99
SMARCB1-203ENST00000407082 CXCL5P42830 114 aa8.89□□□□□ -0.99
SMARCB1-203ENST00000407082 NPC2P61916 151 aa8.89□□□□□ -0.99
SMARCB1-203ENST00000407082 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
SMARCB1-203ENST00000407082 TOMM7Q9P0U1 55 aa8.89□□□□□ -0.99
SMARCB1-203ENST00000407082 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
SMARCB1-203ENST00000407082 Q8IZM0 81 aa8.88□□□□□ -0.99
SMARCB1-203ENST00000407082 LINC00158P58513 81 aa8.87□□□□□ -0.99
SMARCB1-203ENST00000407082 MTURNQ8N3F0 131 aa8.87□□□□□ -0.99
SMARCB1-203ENST00000407082 C11orf45Q8TAV5 145 aa8.87□□□□□ -0.99
SMARCB1-203ENST00000407082 LST1O00453 97 aa8.86□□□□□ -0.99
SMARCB1-203ENST00000407082 COX7A2LO14548 114 aa8.86□□□□□ -0.99
SMARCB1-203ENST00000407082 CRPP02741 224 aa8.86□□□□□ -0.99
SMARCB1-203ENST00000407082 LELP1Q5T871 98 aa8.86□□□□□ -0.99
SMARCB1-203ENST00000407082 CD164L2Q6UWJ8 174 aa8.86□□□□□ -0.99
SMARCB1-203ENST00000407082 CELA1Q9UNI1 258 aa8.86□□□□□ -0.99
SMARCB1-203ENST00000407082 NANOS2P60321 138 aaKnown RBP8.85□□□□□ -0.99
SMARCB1-203ENST00000407082 CFAP161Q6P656 301 aa8.85□□□□□ -0.99
SMARCB1-203ENST00000407082 C2orf82Q6UX34 121 aa8.85□□□□□ -0.99
SMARCB1-203ENST00000407082 C5orf38Q86SI9 138 aa8.85□□□□□ -0.99
SMARCB1-203ENST00000407082 DAND5Q8N907 189 aa8.85□□□□□ -0.99
SMARCB1-203ENST00000407082 CARD19Q96LW7 228 aa8.85□□□□□ -0.99
SMARCB1-203ENST00000407082 A0A0U1RRA0 63 aa8.84□□□□□ -0.99
SMARCB1-203ENST00000407082 H3BNG1 76 aa8.84□□□□□ -0.99
SMARCB1-203ENST00000407082 COX17Q14061 63 aa8.84□□□□□ -0.99
SMARCB1-203ENST00000407082 HECTD4Q9Y4D8 3996 aa8.83□□□□□ -1
SMARCB1-203ENST00000407082 DNAH10Q8IVF4 4471 aa8.83□□□□□ -1
SMARCB1-203ENST00000407082 KMT2AQ03164 3969 aa8.83□□□□□ -1
SMARCB1-203ENST00000407082 CKS1BP61024 79 aa8.83□□□□□ -1
SMARCB1-203ENST00000407082 MIR7-3HGQ8N6C7 128 aa8.83□□□□□ -1
SMARCB1-203ENST00000407082 SND1-IT1Q9HBX3 110 aa8.83□□□□□ -1
SMARCB1-203ENST00000407082 H0YGX0 51 aa8.82□□□□□ -1
SMARCB1-203ENST00000407082 TRACP01848 142 aa8.82□□□□□ -1
SMARCB1-203ENST00000407082 ANGP03950 147 aaKnown RBP8.82□□□□□ -1
SMARCB1-203ENST00000407082 MALP21145 153 aa8.82□□□□□ -1
SMARCB1-203ENST00000407082 XCL1P47992 114 aa8.82□□□□□ -1
SMARCB1-203ENST00000407082 UBE2WQ96B02 151 aa8.82□□□□□ -1
SMARCB1-203ENST00000407082 RPL28P46779 137 aaKnown RBP8.81□□□□□ -1
SMARCB1-203ENST00000407082 REG3AQ06141 175 aa8.81□□□□□ -1
SMARCB1-203ENST00000407082 SOSTDC1Q6X4U4 206 aa8.81□□□□□ -1
SMARCB1-203ENST00000407082 Q6ZTC4 211 aa8.81□□□□□ -1
SMARCB1-203ENST00000407082 A0A096LPF7 62 aa8.8□□□□□ -1
SMARCB1-203ENST00000407082 LINC00269Q8N2A0 174 aa8.8□□□□□ -1
SMARCB1-203ENST00000407082 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms