RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 CRPP02741 224 aa11.4□□□□□ -0.59
COL4A3BP-204ENST00000405807 C18orf65Q6ZTR6 163 aa11.4□□□□□ -0.59
COL4A3BP-204ENST00000405807 K7EQD1 137 aa11.39□□□□□ -0.59
COL4A3BP-204ENST00000405807 NCR3O14931 201 aa11.39□□□□□ -0.59
COL4A3BP-204ENST00000405807 KTN1-AS1Q86SY8 53 aa11.38□□□□□ -0.59
COL4A3BP-204ENST00000405807 MIFP14174 115 aa11.37□□□□□ -0.59
COL4A3BP-204ENST00000405807 Q6YL49 198 aa11.37□□□□□ -0.59
COL4A3BP-204ENST00000405807 TRBV10-3A0A0K0K1G6 114 aa11.36□□□□□ -0.59
COL4A3BP-204ENST00000405807 UBE2L6O14933 153 aa11.36□□□□□ -0.59
COL4A3BP-204ENST00000405807 DEFB114Q30KQ6 69 aa11.36□□□□□ -0.59
COL4A3BP-204ENST00000405807 TRAV10A0A0B4J240 114 aa11.36□□□□□ -0.59
COL4A3BP-204ENST00000405807 SND1-IT1Q9HBX3 110 aa11.36□□□□□ -0.59
COL4A3BP-204ENST00000405807 MIR7-3HGQ8N6C7 128 aa11.35□□□□□ -0.59
COL4A3BP-204ENST00000405807 LINC00337Q8N6G1 96 aa11.35□□□□□ -0.59
COL4A3BP-204ENST00000405807 COX7B2Q8TF08 81 aa11.35□□□□□ -0.59
COL4A3BP-204ENST00000405807 H0YGX0 51 aa11.34□□□□□ -0.59
COL4A3BP-204ENST00000405807 IGKV2-28A0A075B6P5 120 aa11.33□□□□□ -0.6
COL4A3BP-204ENST00000405807 IGKV2D-28P01615 120 aa11.33□□□□□ -0.6
COL4A3BP-204ENST00000405807 C4orf3Q8WVX3 66 aa11.33□□□□□ -0.6
COL4A3BP-204ENST00000405807 Q6ZTI0 123 aa11.33□□□□□ -0.6
COL4A3BP-204ENST00000405807 SMIM11BQ8TCY0 68 aa11.32□□□□□ -0.6
COL4A3BP-204ENST00000405807 KHDC1LQ5JSQ8 128 aa11.32□□□□□ -0.6
COL4A3BP-204ENST00000405807 LINC00158P58513 81 aa11.31□□□□□ -0.6
COL4A3BP-204ENST00000405807 A0A087WYN8 130 aa11.31□□□□□ -0.6
COL4A3BP-204ENST00000405807 TOMM7Q9P0U1 55 aa11.31□□□□□ -0.6
COL4A3BP-204ENST00000405807 ODF3L2Q3SX64 289 aa11.3□□□□□ -0.6
COL4A3BP-204ENST00000405807 M0R378 163 aa11.3□□□□□ -0.6
COL4A3BP-204ENST00000405807 UBL5Q9BZL1 73 aa11.29□□□□□ -0.6
COL4A3BP-204ENST00000405807 PSPHP1O15172 72 aa11.29□□□□□ -0.6
COL4A3BP-204ENST00000405807 MAPK1IP1LQ8NDC0 245 aa11.29□□□□□ -0.6
COL4A3BP-204ENST00000405807 A0A096LNT2 108 aa11.28□□□□□ -0.6
COL4A3BP-204ENST00000405807 TRBV7-4A0A0J9YYF1 115 aa11.28□□□□□ -0.6
COL4A3BP-204ENST00000405807 FSHBP01225 129 aa11.28□□□□□ -0.6
COL4A3BP-204ENST00000405807 CCL18P55774 89 aa11.28□□□□□ -0.6
COL4A3BP-204ENST00000405807 ZFYVE26Q68DK2 2539 aa11.27□□□□□ -0.61
COL4A3BP-204ENST00000405807 LRCOL1A6NCL2 159 aa11.27□□□□□ -0.61
COL4A3BP-204ENST00000405807 NOP10Q9NPE3 64 aaKnown RBP11.27□□□□□ -0.61
COL4A3BP-204ENST00000405807 LINC00588Q9Y4M8 146 aa11.27□□□□□ -0.61
COL4A3BP-204ENST00000405807 Q6ZRP5 223 aa11.27□□□□□ -0.61
COL4A3BP-204ENST00000405807 C8orf87E5RJ46 101 aa11.26□□□□□ -0.61
COL4A3BP-204ENST00000405807 Q1T7F1 81 aa11.26□□□□□ -0.61
COL4A3BP-204ENST00000405807 A8MU10 97 aa11.26□□□□□ -0.61
COL4A3BP-204ENST00000405807 LECT2O14960 151 aa11.26□□□□□ -0.61
COL4A3BP-204ENST00000405807 IGKV3OR2-268A0A0C4DH90 116 aa11.25□□□□□ -0.61
COL4A3BP-204ENST00000405807 FUSP35637 526 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL4A3BP-204ENST00000405807 TMEM254Q8TBM7 123 aa11.25□□□□□ -0.61
COL4A3BP-204ENST00000405807 TRGV2A0A075B6R0 118 aa11.24□□□□□ -0.61
COL4A3BP-204ENST00000405807 IGHV3OR16-9A0A0B4J2B5 98 aa11.24□□□□□ -0.61
COL4A3BP-204ENST00000405807 TRBV6-4A0A1B0GX49 114 aa11.23□□□□□ -0.61
COL4A3BP-204ENST00000405807 TMEM256-PLSCR3K7ERE1 68 aa11.23□□□□□ -0.61
COL4A3BP-204ENST00000405807 POLQO75417 2590 aa11.23□□□□□ -0.61
COL4A3BP-204ENST00000405807 Q6ZTC4 211 aa11.23□□□□□ -0.61
COL4A3BP-204ENST00000405807 SLPIP03973 132 aa11.22□□□□□ -0.61
COL4A3BP-204ENST00000405807 LOC100131303A0A0U1RQF7 123 aa11.22□□□□□ -0.61
COL4A3BP-204ENST00000405807 IGLV4-60A0A075B6I1 120 aa11.21□□□□□ -0.61
COL4A3BP-204ENST00000405807 C16orf74Q96GX8 76 aa11.21□□□□□ -0.61
COL4A3BP-204ENST00000405807 BBC3Q96PG8 261 aaPredicted RBP11.21□□□□□ -0.61
COL4A3BP-204ENST00000405807 ORMDL1Q9P0S3 153 aa11.21□□□□□ -0.62
COL4A3BP-204ENST00000405807 IGHV4-31P0DP07 118 aa11.2□□□□□ -0.62
COL4A3BP-204ENST00000405807 TRGV4A0A0C4DH28 118 aa11.2□□□□□ -0.62
COL4A3BP-204ENST00000405807 FLNCQ14315 2725 aa11.2□□□□□ -0.62
COL4A3BP-204ENST00000405807 TRBV6-8A0A0A6YYG3 113 aa11.19□□□□□ -0.62
COL4A3BP-204ENST00000405807 Q6ZVQ6 151 aa11.19□□□□□ -0.62
COL4A3BP-204ENST00000405807 ZANQ9Y493 2812 aa11.18□□□□□ -0.62
COL4A3BP-204ENST00000405807 ZNF73O43830 326 aaPredicted RBP11.18□□□□□ -0.62
COL4A3BP-204ENST00000405807 LY6G6DO95868 133 aa11.18□□□□□ -0.62
COL4A3BP-204ENST00000405807 USP9YO00507 2555 aaPredicted RBP11.18□□□□□ -0.62
COL4A3BP-204ENST00000405807 Q8N3U1 123 aa11.17□□□□□ -0.62
COL4A3BP-204ENST00000405807 ITPR1Q14643 2758 aa11.17□□□□□ -0.62
COL4A3BP-204ENST00000405807 TRAV22A0A0B4J277 110 aa11.17□□□□□ -0.62
COL4A3BP-204ENST00000405807 UBE2BP63146 152 aa11.17□□□□□ -0.62
COL4A3BP-204ENST00000405807 HAMPP81172 84 aa11.17□□□□□ -0.62
COL4A3BP-204ENST00000405807 SETD2Q9BYW2 2564 aaPredicted RBP11.17□□□□□ -0.62
COL4A3BP-204ENST00000405807 C2CD3Q4AC94 2353 aa11.17□□□□□ -0.62
COL4A3BP-204ENST00000405807 hDV103S1A0JD37 113 aa11.17□□□□□ -0.62
COL4A3BP-204ENST00000405807 LINC01547P58512 204 aaPredicted RBP11.17□□□□□ -0.62
COL4A3BP-204ENST00000405807 CACNA1AO00555 2505 aa11.16□□□□□ -0.62
COL4A3BP-204ENST00000405807 PRYO14603 147 aa11.16□□□□□ -0.62
COL4A3BP-204ENST00000405807 CMC4P56277 68 aaPredicted RBP11.16□□□□□ -0.62
COL4A3BP-204ENST00000405807 NREPQ16612 68 aa11.16□□□□□ -0.62
COL4A3BP-204ENST00000405807 SYCNQ0VAF6 134 aa11.16□□□□□ -0.62
COL4A3BP-204ENST00000405807 NDUFS5O43920 106 aa11.15□□□□□ -0.62
COL4A3BP-204ENST00000405807 GIG44P09565 113 aaPredicted RBP11.15□□□□□ -0.62
COL4A3BP-204ENST00000405807 DOPEY1Q5JWR5 2465 aa11.15□□□□□ -0.62
COL4A3BP-204ENST00000405807 LINC00959A0A1B0GUT2 108 aa11.15□□□□□ -0.62
COL4A3BP-204ENST00000405807 JMJD7-PLA2G4BH0Y9G9 81 aa11.15□□□□□ -0.62
COL4A3BP-204ENST00000405807 PRB1P04280 392 aa11.15□□□□□ -0.62
COL4A3BP-204ENST00000405807 MXRA5Q9NR99 2828 aa11.14□□□□□ -0.63
COL4A3BP-204ENST00000405807 CCL24O00175 119 aa11.13□□□□□ -0.63
COL4A3BP-204ENST00000405807 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
COL4A3BP-204ENST00000405807 LYRM9A8MSI8 78 aa11.13□□□□□ -0.63
COL4A3BP-204ENST00000405807 SPTSSBQ8NFR3 76 aa11.12□□□□□ -0.63
COL4A3BP-204ENST00000405807 PRR26Q8N8Z3 221 aa11.12□□□□□ -0.63
COL4A3BP-204ENST00000405807 C11orf44Q8N8P7 122 aa11.11□□□□□ -0.63
COL4A3BP-204ENST00000405807 Q8IZM0 81 aa11.11□□□□□ -0.63
COL4A3BP-204ENST00000405807 Q8N814 137 aa11.11□□□□□ -0.63
COL4A3BP-204ENST00000405807 TLN2Q9Y4G6 2542 aa11.1□□□□□ -0.63
COL4A3BP-204ENST00000405807 ERC2-IT1O76042 136 aa11.1□□□□□ -0.63
COL4A3BP-204ENST00000405807 A8MUN3 132 aa11.1□□□□□ -0.63
COL4A3BP-204ENST00000405807 MYO9AB2RTY4 2548 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms