RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 CR1P17927 2039 aa6.72□□□□□ -1.33
SMC1B-202ENST00000404354 ATOX1O00244 68 aa6.71□□□□□ -1.33
SMC1B-202ENST00000404354 J3KT08 172 aa6.71□□□□□ -1.34
SMC1B-202ENST00000404354 PRB1P04280 392 aa6.71□□□□□ -1.34
SMC1B-202ENST00000404354 KRTAP10-9P60411 292 aa6.71□□□□□ -1.34
SMC1B-202ENST00000404354 Q6YL49 198 aa6.71□□□□□ -1.34
SMC1B-202ENST00000404354 ENHOQ6UWT2 76 aa6.7□□□□□ -1.34
SMC1B-202ENST00000404354 FAM222AQ5U5X8 452 aa6.7□□□□□ -1.34
SMC1B-202ENST00000404354 Q8N3U1 123 aa6.7□□□□□ -1.34
SMC1B-202ENST00000404354 PRORYQ9H606 182 aa6.7□□□□□ -1.34
SMC1B-202ENST00000404354 WFDC11Q8NEX6 87 aa6.69□□□□□ -1.34
SMC1B-202ENST00000404354 IGHV3OR16-9A0A0B4J2B5 98 aa6.69□□□□□ -1.34
SMC1B-202ENST00000404354 ORMDL1Q9P0S3 153 aa6.69□□□□□ -1.34
SMC1B-202ENST00000404354 TRBV10-1A0A0K0K1A3 114 aa6.68□□□□□ -1.34
SMC1B-202ENST00000404354 OXTP01178 125 aa6.68□□□□□ -1.34
SMC1B-202ENST00000404354 C4orf26Q17RF5 130 aa6.68□□□□□ -1.34
SMC1B-202ENST00000404354 SMIM9A6NGZ8 99 aa6.68□□□□□ -1.34
SMC1B-202ENST00000404354 DEFB4AO15263 64 aa6.68□□□□□ -1.34
SMC1B-202ENST00000404354 GHRHP01286 108 aa6.68□□□□□ -1.34
SMC1B-202ENST00000404354 CRYGAP11844 174 aa6.68□□□□□ -1.34
SMC1B-202ENST00000404354 C20orf197Q8N268 126 aa6.68□□□□□ -1.34
SMC1B-202ENST00000404354 H0YGX0 51 aa6.67□□□□□ -1.34
SMC1B-202ENST00000404354 SERP2Q8N6R1 65 aa6.67□□□□□ -1.34
SMC1B-202ENST00000404354 TRBV6-8A0A0A6YYG3 113 aa6.67□□□□□ -1.34
SMC1B-202ENST00000404354 PF4P02776 101 aa6.67□□□□□ -1.34
SMC1B-202ENST00000404354 SS18Q15532 418 aa6.67□□□□□ -1.34
SMC1B-202ENST00000404354 CCL24O00175 119 aa6.67□□□□□ -1.34
SMC1B-202ENST00000404354 HRCT1Q6UXD1 115 aa6.67□□□□□ -1.34
SMC1B-202ENST00000404354 C4orf3Q8WVX3 66 aa6.67□□□□□ -1.34
SMC1B-202ENST00000404354 GIG44P09565 113 aaPredicted RBP6.66□□□□□ -1.34
SMC1B-202ENST00000404354 FHL2Q14192 279 aa6.66□□□□□ -1.34
SMC1B-202ENST00000404354 LINC00269Q8N2A0 174 aa6.66□□□□□ -1.34
SMC1B-202ENST00000404354 DPH3Q96FX2 82 aa6.66□□□□□ -1.34
SMC1B-202ENST00000404354 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
SMC1B-202ENST00000404354 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
SMC1B-202ENST00000404354 M0R2N4 97 aa6.65□□□□□ -1.34
SMC1B-202ENST00000404354 IGHV4-31P0DP07 118 aa6.65□□□□□ -1.34
SMC1B-202ENST00000404354 USP24Q9UPU5 2620 aa6.65□□□□□ -1.34
SMC1B-202ENST00000404354 HAMPP81172 84 aa6.65□□□□□ -1.34
SMC1B-202ENST00000404354 C6orf99Q4VX62 202 aa6.65□□□□□ -1.34
SMC1B-202ENST00000404354 Q6JHZ5 121 aa6.65□□□□□ -1.34
SMC1B-202ENST00000404354 SPATA3Q8NHX4 192 aa6.65□□□□□ -1.34
SMC1B-202ENST00000404354 VWFP04275 2813 aa6.65□□□□□ -1.35
SMC1B-202ENST00000404354 IBA57-AS1B1ANH7 110 aa6.65□□□□□ -1.35
SMC1B-202ENST00000404354 GYPEP15421 78 aa6.65□□□□□ -1.35
SMC1B-202ENST00000404354 SCXQ7RTU7 201 aa6.65□□□□□ -1.35
SMC1B-202ENST00000404354 TMEM86BQ8N661 226 aa6.65□□□□□ -1.35
SMC1B-202ENST00000404354 A0A087WZ39 114 aa6.64□□□□□ -1.35
SMC1B-202ENST00000404354 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
SMC1B-202ENST00000404354 LAMTOR3Q9UHA4 124 aa6.64□□□□□ -1.35
SMC1B-202ENST00000404354 A0A096LNT2 108 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 F8P00451 2351 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 UNC79Q9P2D8 2635 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 CCKP06307 115 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 OVOL2Q9BRP0 275 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 SNURFQ9Y675 71 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 Q8N814 137 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 Q8NDZ9 215 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 IL17DQ8TAD2 202 aa6.63□□□□□ -1.35
SMC1B-202ENST00000404354 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
SMC1B-202ENST00000404354 UPK3BQ9BT76 320 aa6.62□□□□□ -1.35
SMC1B-202ENST00000404354 NANOS2P60321 138 aaKnown RBP6.62□□□□□ -1.35
SMC1B-202ENST00000404354 C6orf223Q8N319 242 aa6.62□□□□□ -1.35
SMC1B-202ENST00000404354 C5orf47Q569G3 176 aa6.62□□□□□ -1.35
SMC1B-202ENST00000404354 BBC3Q96PG8 261 aaPredicted RBP6.61□□□□□ -1.35
SMC1B-202ENST00000404354 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
SMC1B-202ENST00000404354 C16orf74Q96GX8 76 aa6.61□□□□□ -1.35
SMC1B-202ENST00000404354 HTN3P15516 51 aa6.61□□□□□ -1.35
SMC1B-202ENST00000404354 J3QLI3 93 aa6.6□□□□□ -1.35
SMC1B-202ENST00000404354 ITPR2Q14571 2701 aa6.6□□□□□ -1.35
SMC1B-202ENST00000404354 DSCR9P59020 149 aa6.6□□□□□ -1.35
SMC1B-202ENST00000404354 OBSCN-AS1Q96MR7 158 aa6.6□□□□□ -1.35
SMC1B-202ENST00000404354 UBL5Q9BZL1 73 aa6.6□□□□□ -1.35
SMC1B-202ENST00000404354 TMEM258P61165 79 aa6.59□□□□□ -1.35
SMC1B-202ENST00000404354 C10orf25Q5T742 122 aa6.59□□□□□ -1.35
SMC1B-202ENST00000404354 XAGE1AQ9HD64 81 aa6.59□□□□□ -1.35
SMC1B-202ENST00000404354 DNAJC9-AS1A6NH13 148 aa6.58□□□□□ -1.36
SMC1B-202ENST00000404354 TENM4Q6N022 2769 aa6.58□□□□□ -1.36
SMC1B-202ENST00000404354 TRAV10A0A0B4J240 114 aa6.58□□□□□ -1.36
SMC1B-202ENST00000404354 UNQ6190/PRO20217Q6UXQ8 127 aa6.58□□□□□ -1.36
SMC1B-202ENST00000404354 LINC01006Q8NI28 216 aa6.58□□□□□ -1.36
SMC1B-202ENST00000404354 TMEM256-PLSCR3K7ERE1 68 aa6.58□□□□□ -1.36
SMC1B-202ENST00000404354 ZNF843Q8N446 348 aa6.58□□□□□ -1.36
SMC1B-202ENST00000404354 UBR5O95071 2799 aaPredicted RBP6.57□□□□□ -1.36
SMC1B-202ENST00000404354 LINC00482Q8N8I6 264 aa6.57□□□□□ -1.36
SMC1B-202ENST00000404354 CHCHD10Q8WYQ3 142 aaPredicted RBP6.57□□□□□ -1.36
SMC1B-202ENST00000404354 FSHBP01225 129 aa6.57□□□□□ -1.36
SMC1B-202ENST00000404354 RBM3P98179 157 aaKnown RBP6.57□□□□□ -1.36
SMC1B-202ENST00000404354 Q6ZQY7 126 aa6.57□□□□□ -1.36
SMC1B-202ENST00000404354 RMI2Q96E14 147 aa6.57□□□□□ -1.36
SMC1B-202ENST00000404354 JMJD7-PLA2G4BH0Y9G9 81 aa6.56□□□□□ -1.36
SMC1B-202ENST00000404354 TEP1Q99973 2627 aaKnown RBP6.56□□□□□ -1.36
SMC1B-202ENST00000404354 ATRQ13535 2644 aa6.55□□□□□ -1.36
SMC1B-202ENST00000404354 PDZD2O15018 2839 aa6.55□□□□□ -1.36
SMC1B-202ENST00000404354 CSNK1G2-AS1Q8NCQ2 148 aa6.55□□□□□ -1.36
SMC1B-202ENST00000404354 Q8N9L7 120 aa6.55□□□□□ -1.36
SMC1B-202ENST00000404354 LY6G6DO95868 133 aa6.55□□□□□ -1.36
SMC1B-202ENST00000404354 Q8IZM0 81 aa6.55□□□□□ -1.36
SMC1B-202ENST00000404354 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms