RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 RMI2Q96E14 147 aa11.38□□□□□ -0.59
CSNK2A1-203ENST00000400217 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
CSNK2A1-203ENST00000400217 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
CSNK2A1-203ENST00000400217 MUSTN1Q8IVN3 82 aa11.38□□□□□ -0.59
CSNK2A1-203ENST00000400217 MUC7Q8TAX7 377 aa11.38□□□□□ -0.59
CSNK2A1-203ENST00000400217 CSMD3Q7Z407 3707 aa11.37□□□□□ -0.59
CSNK2A1-203ENST00000400217 TMEM238LA0A1B0GVL6 79 aa11.37□□□□□ -0.59
CSNK2A1-203ENST00000400217 A6NJY4 79 aa11.37□□□□□ -0.59
CSNK2A1-203ENST00000400217 SMIM13P0DJ93 91 aa11.37□□□□□ -0.59
CSNK2A1-203ENST00000400217 PLECQ15149 4684 aaKnown RBP11.37□□□□□ -0.59
CSNK2A1-203ENST00000400217 A0A0U1RRA0 63 aa11.36□□□□□ -0.59
CSNK2A1-203ENST00000400217 NHP2Q9NX24 153 aaKnown RBP11.36□□□□□ -0.59
CSNK2A1-203ENST00000400217 IFITM1P13164 125 aa11.35□□□□□ -0.59
CSNK2A1-203ENST00000400217 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
CSNK2A1-203ENST00000400217 DAND5Q8N907 189 aa11.35□□□□□ -0.59
CSNK2A1-203ENST00000400217 C6orf223Q8N319 242 aa11.34□□□□□ -0.59
CSNK2A1-203ENST00000400217 TAX1BP3O14907 124 aa11.33□□□□□ -0.6
CSNK2A1-203ENST00000400217 LINC00158P58513 81 aa11.33□□□□□ -0.6
CSNK2A1-203ENST00000400217 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
CSNK2A1-203ENST00000400217 LINC00526Q96FQ7 95 aa11.33□□□□□ -0.6
CSNK2A1-203ENST00000400217 WWC2-AS2Q96NR7 200 aa11.33□□□□□ -0.6
CSNK2A1-203ENST00000400217 KRTAP1-5Q9BYS1 174 aa11.33□□□□□ -0.6
CSNK2A1-203ENST00000400217 ERG28Q9UKR5 140 aa11.33□□□□□ -0.6
CSNK2A1-203ENST00000400217 COX11Q9Y6N1 276 aa11.33□□□□□ -0.6
CSNK2A1-203ENST00000400217 A0A1B0GWB2 263 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 A4D1N5 150 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 ZNF561-AS1K7EIQ3 104 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 NPC2P61916 151 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 NTN5Q8WTR8 489 aaPredicted RBP11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 STARD9Q9P2P6 4700 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 PFN2P35080 140 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 HIGD2BQ4VC39 106 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 LINC00308Q8TCZ7 52 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 COPS9Q8WXC6 57 aa11.32□□□□□ -0.6
CSNK2A1-203ENST00000400217 DNAH1Q9P2D7 4330 aa11.31□□□□□ -0.6
CSNK2A1-203ENST00000400217 A0A1B0GV90 55 aa11.31□□□□□ -0.6
CSNK2A1-203ENST00000400217 K7ERJ3 54 aa11.31□□□□□ -0.6
CSNK2A1-203ENST00000400217 MIR7-3HGQ8N6C7 128 aa11.31□□□□□ -0.6
CSNK2A1-203ENST00000400217 COX17Q14061 63 aa11.3□□□□□ -0.6
CSNK2A1-203ENST00000400217 TTC32Q5I0X7 151 aa11.3□□□□□ -0.6
CSNK2A1-203ENST00000400217 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
CSNK2A1-203ENST00000400217 RAB37Q96AX2 223 aa11.3□□□□□ -0.6
CSNK2A1-203ENST00000400217 GVQW2A0A096LPI5 108 aaPredicted RBP11.29□□□□□ -0.6
CSNK2A1-203ENST00000400217 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
CSNK2A1-203ENST00000400217 NBDYA0A0U1RRE5 68 aa11.29□□□□□ -0.6
CSNK2A1-203ENST00000400217 EIF4EBP3O60516 100 aaPredicted RBP11.29□□□□□ -0.6
CSNK2A1-203ENST00000400217 CFC1BP0CG36 223 aa11.29□□□□□ -0.6
CSNK2A1-203ENST00000400217 CFC1P0CG37 223 aa11.29□□□□□ -0.6
CSNK2A1-203ENST00000400217 C2orf48Q96LS8 159 aa11.29□□□□□ -0.6
CSNK2A1-203ENST00000400217 CASC10Q5T4H9 136 aa11.28□□□□□ -0.6
CSNK2A1-203ENST00000400217 SOSTDC1Q6X4U4 206 aa11.28□□□□□ -0.6
CSNK2A1-203ENST00000400217 PPDPFQ9H3Y8 114 aa11.28□□□□□ -0.6
CSNK2A1-203ENST00000400217 F8WDY8 70 aa11.27□□□□□ -0.6
CSNK2A1-203ENST00000400217 C9orf116Q5BN46 136 aaPredicted RBP11.27□□□□□ -0.6
CSNK2A1-203ENST00000400217 CAMK2N2Q96S95 79 aa11.27□□□□□ -0.6
CSNK2A1-203ENST00000400217 LYSTQ99698 3801 aa11.27□□□□□ -0.6
CSNK2A1-203ENST00000400217 C9orf118A6NHY6 69 aa11.26□□□□□ -0.61
CSNK2A1-203ENST00000400217 USP17L23D6RBM5 183 aa11.25□□□□□ -0.61
CSNK2A1-203ENST00000400217 VPS13DQ5THJ4 4388 aa11.25□□□□□ -0.61
CSNK2A1-203ENST00000400217 A0A0B4J2C4 111 aa11.25□□□□□ -0.61
CSNK2A1-203ENST00000400217 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
CSNK2A1-203ENST00000400217 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
CSNK2A1-203ENST00000400217 TENM2Q9NT68 2774 aa11.24□□□□□ -0.61
CSNK2A1-203ENST00000400217 PRO1854Q9UHT4 67 aa11.24□□□□□ -0.61
CSNK2A1-203ENST00000400217 Q6ZRU5 148 aa11.23□□□□□ -0.61
CSNK2A1-203ENST00000400217 H3BUT2 72 aa11.22□□□□□ -0.61
CSNK2A1-203ENST00000400217 PSCAO43653 123 aa11.22□□□□□ -0.61
CSNK2A1-203ENST00000400217 LOC107984156A0A0G2JMH3 177 aa11.21□□□□□ -0.61
CSNK2A1-203ENST00000400217 SYCNQ0VAF6 134 aa11.21□□□□□ -0.61
CSNK2A1-203ENST00000400217 ARL17AQ8IVW1 177 aa11.21□□□□□ -0.61
CSNK2A1-203ENST00000400217 NAA38Q9BRA0 125 aaKnown RBP11.21□□□□□ -0.61
CSNK2A1-203ENST00000400217 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.61
CSNK2A1-203ENST00000400217 TGP01266 2768 aa11.2□□□□□ -0.62
CSNK2A1-203ENST00000400217 C3orf84H3BNL1 204 aa11.2□□□□□ -0.62
CSNK2A1-203ENST00000400217 LECT2O14960 151 aa11.2□□□□□ -0.62
CSNK2A1-203ENST00000400217 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
CSNK2A1-203ENST00000400217 M0R2N4 97 aa11.19□□□□□ -0.62
CSNK2A1-203ENST00000400217 TSPAN13O95857 204 aa11.18□□□□□ -0.62
CSNK2A1-203ENST00000400217 RNF151Q2KHN1 245 aa11.18□□□□□ -0.62
CSNK2A1-203ENST00000400217 SLPIP03973 132 aa11.17□□□□□ -0.62
CSNK2A1-203ENST00000400217 CARD19Q96LW7 228 aa11.17□□□□□ -0.62
CSNK2A1-203ENST00000400217 A0A1W2PPM0 123 aa11.16□□□□□ -0.62
CSNK2A1-203ENST00000400217 WFDC2Q14508 124 aa11.16□□□□□ -0.62
CSNK2A1-203ENST00000400217 VAMP3Q15836 100 aa11.16□□□□□ -0.62
CSNK2A1-203ENST00000400217 NDUFC2-KCTD14E9PQ53 114 aa11.15□□□□□ -0.62
CSNK2A1-203ENST00000400217 LY6G6CO95867 125 aa11.15□□□□□ -0.62
CSNK2A1-203ENST00000400217 Q6ZR54 194 aa11.15□□□□□ -0.62
CSNK2A1-203ENST00000400217 Q6ZRN7 208 aaPredicted RBP11.15□□□□□ -0.62
CSNK2A1-203ENST00000400217 H7C2G1 150 aa11.14□□□□□ -0.63
CSNK2A1-203ENST00000400217 FABP2P12104 132 aa11.14□□□□□ -0.63
CSNK2A1-203ENST00000400217 C14orf177Q52M58 125 aa11.14□□□□□ -0.63
CSNK2A1-203ENST00000400217 IGKV2-28A0A075B6P5 120 aa11.13□□□□□ -0.63
CSNK2A1-203ENST00000400217 TRAV13-2A0A0B4J235 113 aa11.13□□□□□ -0.63
CSNK2A1-203ENST00000400217 NDUFC2O95298 119 aa11.13□□□□□ -0.63
CSNK2A1-203ENST00000400217 IGKV2D-28P01615 120 aa11.13□□□□□ -0.63
CSNK2A1-203ENST00000400217 RPL13AP40429 203 aaKnown RBP11.13□□□□□ -0.63
CSNK2A1-203ENST00000400217 LINC00476Q8WZB0 136 aa11.13□□□□□ -0.63
CSNK2A1-203ENST00000400217 Q1RN00 199 aa11.12□□□□□ -0.63
CSNK2A1-203ENST00000400217 DNAH10Q8IVF4 4471 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms