RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
CCDC144A-205ENST00000399264 X6R8D5 127 aa10.08□□□□□ -0.8
CCDC144A-205ENST00000399264 A0A087WYN8 130 aa10.08□□□□□ -0.8
CCDC144A-205ENST00000399264 NDUFV3P56181 108 aaKnown RBP10.08□□□□□ -0.8
CCDC144A-205ENST00000399264 SMIM11BQ8TCY0 68 aa10.08□□□□□ -0.8
CCDC144A-205ENST00000399264 A0A087WZ39 114 aa10.07□□□□□ -0.8
CCDC144A-205ENST00000399264 CRPP02741 224 aa10.07□□□□□ -0.8
CCDC144A-205ENST00000399264 SMCR5Q8TEV8 140 aa10.07□□□□□ -0.8
CCDC144A-205ENST00000399264 PRR3P79522 188 aaKnown RBP10.06□□□□□ -0.8
CCDC144A-205ENST00000399264 IGLV10-54A0A075B6I4 117 aa10.06□□□□□ -0.8
CCDC144A-205ENST00000399264 COPS9Q8WXC6 57 aa10.06□□□□□ -0.8
CCDC144A-205ENST00000399264 C6orf226Q5I0X4 101 aa10.05□□□□□ -0.8
CCDC144A-205ENST00000399264 FAM222AQ5U5X8 452 aa10.05□□□□□ -0.8
CCDC144A-205ENST00000399264 DEFB135Q30KP9 77 aa10.05□□□□□ -0.8
CCDC144A-205ENST00000399264 CCDC179H3BU77 68 aa10.04□□□□□ -0.8
CCDC144A-205ENST00000399264 PAX4O43316 350 aa10.04□□□□□ -0.8
CCDC144A-205ENST00000399264 RPL28P46779 137 aaKnown RBP10.04□□□□□ -0.8
CCDC144A-205ENST00000399264 TRAV13-2A0A0B4J235 113 aa10.04□□□□□ -0.8
CCDC144A-205ENST00000399264 TRACP01848 142 aa10.04□□□□□ -0.8
CCDC144A-205ENST00000399264 OR13C6PQ8NH95 151 aa10.04□□□□□ -0.8
CCDC144A-205ENST00000399264 SLPIP03973 132 aa10.03□□□□□ -0.8
CCDC144A-205ENST00000399264 B5MCH6 92 aa10.03□□□□□ -0.8
CCDC144A-205ENST00000399264 KIR2DL5BQ8NHK3 375 aa10.03□□□□□ -0.8
CCDC144A-205ENST00000399264 LINC00269Q8N2A0 174 aa10.02□□□□□ -0.8
CCDC144A-205ENST00000399264 LINC00612Q8N6U2 182 aa10.02□□□□□ -0.81
CCDC144A-205ENST00000399264 C9orf116Q5BN46 136 aaPredicted RBP10.02□□□□□ -0.81
CCDC144A-205ENST00000399264 IBA57-AS1B1ANH7 110 aa10.01□□□□□ -0.81
CCDC144A-205ENST00000399264 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
CCDC144A-205ENST00000399264 LY6G6DO95868 133 aa10.01□□□□□ -0.81
CCDC144A-205ENST00000399264 PRO0255Q9UI72 69 aa10□□□□□ -0.81
CCDC144A-205ENST00000399264 MALP21145 153 aa10□□□□□ -0.81
CCDC144A-205ENST00000399264 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
CCDC144A-205ENST00000399264 LECT2O14960 151 aa9.99□□□□□ -0.81
CCDC144A-205ENST00000399264 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
CCDC144A-205ENST00000399264 ANK2Q01484 3957 aa9.99□□□□□ -0.81
CCDC144A-205ENST00000399264 GAGE2AQ6NT46 116 aa9.99□□□□□ -0.81
CCDC144A-205ENST00000399264 CELA1Q9UNI1 258 aa9.99□□□□□ -0.81
CCDC144A-205ENST00000399264 J3QKU1 62 aa9.98□□□□□ -0.81
CCDC144A-205ENST00000399264 SS18Q15532 418 aa9.98□□□□□ -0.81
CCDC144A-205ENST00000399264 Q6Q795 121 aa9.97□□□□□ -0.81
CCDC144A-205ENST00000399264 C14orf132Q9NPU4 83 aa9.97□□□□□ -0.81
CCDC144A-205ENST00000399264 TENM3Q9P273 2699 aa9.97□□□□□ -0.81
CCDC144A-205ENST00000399264 INAFM1C9JVW0 142 aa9.97□□□□□ -0.81
CCDC144A-205ENST00000399264 C3orf56Q8N813 242 aa9.97□□□□□ -0.81
CCDC144A-205ENST00000399264 A0A1B0GUV1 79 aa9.97□□□□□ -0.81
CCDC144A-205ENST00000399264 HTN3P15516 51 aa9.97□□□□□ -0.81
CCDC144A-205ENST00000399264 Q8NDZ9 215 aa9.97□□□□□ -0.81
CCDC144A-205ENST00000399264 IGHV4-28A0A0C4DH34 117 aa9.96□□□□□ -0.81
CCDC144A-205ENST00000399264 ANGP03950 147 aaKnown RBP9.96□□□□□ -0.81
CCDC144A-205ENST00000399264 NCR3O14931 201 aa9.95□□□□□ -0.82
CCDC144A-205ENST00000399264 DNAL4O96015 105 aa9.95□□□□□ -0.82
CCDC144A-205ENST00000399264 KIAA0087Q14695 138 aa9.95□□□□□ -0.82
CCDC144A-205ENST00000399264 STAB1Q9NY15 2570 aa9.95□□□□□ -0.82
CCDC144A-205ENST00000399264 CHCHD10Q8WYQ3 142 aaPredicted RBP9.95□□□□□ -0.82
CCDC144A-205ENST00000399264 PPDPFQ9H3Y8 114 aa9.95□□□□□ -0.82
CCDC144A-205ENST00000399264 NANOS2P60321 138 aaKnown RBP9.94□□□□□ -0.82
CCDC144A-205ENST00000399264 C6orf223Q8N319 242 aa9.94□□□□□ -0.82
CCDC144A-205ENST00000399264 TRBV7-7A0A0K0K1E9 115 aa9.93□□□□□ -0.82
CCDC144A-205ENST00000399264 Q8IZM0 81 aa9.93□□□□□ -0.82
CCDC144A-205ENST00000399264 FAM236AA0A1B0GUQ0 79 aa9.93□□□□□ -0.82
CCDC144A-205ENST00000399264 FAM236BA0A1B0GV22 79 aa9.93□□□□□ -0.82
CCDC144A-205ENST00000399264 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
CCDC144A-205ENST00000399264 FBN1P35555 2871 aaKnown RBP9.93□□□□□ -0.82
CCDC144A-205ENST00000399264 REG3AQ06141 175 aa9.92□□□□□ -0.82
CCDC144A-205ENST00000399264 C10orf25Q5T742 122 aa9.92□□□□□ -0.82
CCDC144A-205ENST00000399264 FLNBO75369 2602 aaKnown RBP9.92□□□□□ -0.82
CCDC144A-205ENST00000399264 DAD1P61803 113 aa9.91□□□□□ -0.82
CCDC144A-205ENST00000399264 NOTCH1P46531 2555 aa9.91□□□□□ -0.82
CCDC144A-205ENST00000399264 ACYP1P07311 99 aa9.91□□□□□ -0.82
CCDC144A-205ENST00000399264 SMIM9A6NGZ8 99 aa9.9□□□□□ -0.82
CCDC144A-205ENST00000399264 CD164L2Q6UWJ8 174 aa9.9□□□□□ -0.82
CCDC144A-205ENST00000399264 H0YGX0 51 aa9.9□□□□□ -0.82
CCDC144A-205ENST00000399264 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
CCDC144A-205ENST00000399264 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
CCDC144A-205ENST00000399264 MAST4O15021 2626 aa9.89□□□□□ -0.83
CCDC144A-205ENST00000399264 LYRM9A8MSI8 78 aa9.89□□□□□ -0.83
CCDC144A-205ENST00000399264 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
CCDC144A-205ENST00000399264 C9orf66Q5T8R8 295 aa9.88□□□□□ -0.83
CCDC144A-205ENST00000399264 Q8NAQ8 132 aa9.88□□□□□ -0.83
CCDC144A-205ENST00000399264 INAFM2P0DMQ5 153 aa9.88□□□□□ -0.83
CCDC144A-205ENST00000399264 CFAP161Q6P656 301 aa9.88□□□□□ -0.83
CCDC144A-205ENST00000399264 LINC00846Q9NV44 126 aa9.88□□□□□ -0.83
CCDC144A-205ENST00000399264 KLK12Q9UKR0 248 aa9.87□□□□□ -0.83
CCDC144A-205ENST00000399264 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
CCDC144A-205ENST00000399264 F8P00451 2351 aa9.85□□□□□ -0.83
CCDC144A-205ENST00000399264 OBSCN-AS1Q96MR7 158 aa9.85□□□□□ -0.83
CCDC144A-205ENST00000399264 KLK5Q9Y337 293 aaPredicted RBP9.84□□□□□ -0.83
CCDC144A-205ENST00000399264 CXCL5P42830 114 aa9.84□□□□□ -0.83
CCDC144A-205ENST00000399264 C6orf99Q4VX62 202 aa9.84□□□□□ -0.83
CCDC144A-205ENST00000399264 IGHV4-30-4P0DP06 118 aa9.83□□□□□ -0.84
CCDC144A-205ENST00000399264 ORMDL1Q9P0S3 153 aa9.83□□□□□ -0.84
CCDC144A-205ENST00000399264 CYSRT1A8MQ03 144 aa9.83□□□□□ -0.84
CCDC144A-205ENST00000399264 APOC4P55056 127 aa9.83□□□□□ -0.84
CCDC144A-205ENST00000399264 Q8N814 137 aa9.83□□□□□ -0.84
CCDC144A-205ENST00000399264 A0A087WVE0 104 aa9.82□□□□□ -0.84
CCDC144A-205ENST00000399264 SPAG11BQ08648 103 aa9.82□□□□□ -0.84
CCDC144A-205ENST00000399264 LINC01561Q8N1V8 128 aa9.82□□□□□ -0.84
CCDC144A-205ENST00000399264 RETNQ9HD89 108 aa9.82□□□□□ -0.84
CCDC144A-205ENST00000399264 ENHOQ6UWT2 76 aa9.81□□□□□ -0.84
CCDC144A-205ENST00000399264 IMUPQ9GZP8 106 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms