RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 Q6ZQY7 126 aa10.49□□□□□ -0.73
RPRD1A-202ENST00000399022 LINC00482Q8N8I6 264 aa10.49□□□□□ -0.73
RPRD1A-202ENST00000399022 LOC100131303A0A0U1RQF7 123 aa10.49□□□□□ -0.73
RPRD1A-202ENST00000399022 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
RPRD1A-202ENST00000399022 BBC3Q96PG8 261 aaPredicted RBP10.49□□□□□ -0.73
RPRD1A-202ENST00000399022 TRAV7A0A075B6U4 112 aa10.48□□□□□ -0.73
RPRD1A-202ENST00000399022 HECTD1Q9ULT8 2610 aa10.48□□□□□ -0.73
RPRD1A-202ENST00000399022 RPS28P62857 69 aaKnown RBP10.48□□□□□ -0.73
RPRD1A-202ENST00000399022 SOSTDC1Q6X4U4 206 aa10.48□□□□□ -0.73
RPRD1A-202ENST00000399022 Q6ZSN1 163 aa10.48□□□□□ -0.73
RPRD1A-202ENST00000399022 CAMK2N2Q96S95 79 aa10.47□□□□□ -0.73
RPRD1A-202ENST00000399022 NDUFC1O43677 76 aa10.47□□□□□ -0.73
RPRD1A-202ENST00000399022 LINC00337Q8N6G1 96 aa10.47□□□□□ -0.73
RPRD1A-202ENST00000399022 H3BQ85 93 aa10.46□□□□□ -0.73
RPRD1A-202ENST00000399022 TRBV6-8A0A0A6YYG3 113 aa10.46□□□□□ -0.74
RPRD1A-202ENST00000399022 COX7BP24311 80 aa10.46□□□□□ -0.74
RPRD1A-202ENST00000399022 PRO0255Q9UI72 69 aa10.46□□□□□ -0.74
RPRD1A-202ENST00000399022 SPART-AS1P0CW21 52 aa10.46□□□□□ -0.74
RPRD1A-202ENST00000399022 FAM218AQ96MZ4 157 aa10.46□□□□□ -0.74
RPRD1A-202ENST00000399022 PRR3P79522 188 aaKnown RBP10.45□□□□□ -0.74
RPRD1A-202ENST00000399022 SMR3AQ99954 134 aa10.45□□□□□ -0.74
RPRD1A-202ENST00000399022 INAFM1C9JVW0 142 aa10.44□□□□□ -0.74
RPRD1A-202ENST00000399022 SMCR5Q8TEV8 140 aa10.44□□□□□ -0.74
RPRD1A-202ENST00000399022 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
RPRD1A-202ENST00000399022 TRBV6-4A0A1B0GX49 114 aa10.44□□□□□ -0.74
RPRD1A-202ENST00000399022 NTM-AS1Q6ZSK4 140 aa10.44□□□□□ -0.74
RPRD1A-202ENST00000399022 MIFP14174 115 aa10.44□□□□□ -0.74
RPRD1A-202ENST00000399022 XAGE1AQ9HD64 81 aa10.44□□□□□ -0.74
RPRD1A-202ENST00000399022 BRI3O95415 125 aa10.43□□□□□ -0.74
RPRD1A-202ENST00000399022 RMI2Q96E14 147 aa10.42□□□□□ -0.74
RPRD1A-202ENST00000399022 Q9UF83 564 aa10.42□□□□□ -0.74
RPRD1A-202ENST00000399022 ATP5EP56381 51 aaPredicted RBP10.42□□□□□ -0.74
RPRD1A-202ENST00000399022 Q8N814 137 aa10.42□□□□□ -0.74
RPRD1A-202ENST00000399022 CHCHD10Q8WYQ3 142 aaPredicted RBP10.42□□□□□ -0.74
RPRD1A-202ENST00000399022 IGKV2D-24A0A075B6R9 120 aa10.41□□□□□ -0.74
RPRD1A-202ENST00000399022 MP68P56378 58 aa10.41□□□□□ -0.74
RPRD1A-202ENST00000399022 SPTSSBQ8NFR3 76 aa10.41□□□□□ -0.74
RPRD1A-202ENST00000399022 LITAFQ99732 161 aa10.41□□□□□ -0.74
RPRD1A-202ENST00000399022 FAM19A3Q7Z5A8 133 aa10.41□□□□□ -0.74
RPRD1A-202ENST00000399022 MUC4Q99102 2169 aa10.41□□□□□ -0.74
RPRD1A-202ENST00000399022 PRR4Q16378 134 aa10.4□□□□□ -0.74
RPRD1A-202ENST00000399022 Q8N3U1 123 aa10.4□□□□□ -0.74
RPRD1A-202ENST00000399022 LINC00959A0A1B0GUT2 108 aa10.4□□□□□ -0.74
RPRD1A-202ENST00000399022 LRCOL1A6NCL2 159 aa10.4□□□□□ -0.74
RPRD1A-202ENST00000399022 PRO0628Q9UI54 55 aa10.4□□□□□ -0.74
RPRD1A-202ENST00000399022 C3orf84H3BNL1 204 aa10.4□□□□□ -0.75
RPRD1A-202ENST00000399022 DMXL2Q8TDJ6 3036 aa10.4□□□□□ -0.75
RPRD1A-202ENST00000399022 EIF4EBP3O60516 100 aaPredicted RBP10.39□□□□□ -0.75
RPRD1A-202ENST00000399022 C1orf158Q8N1D5 194 aa10.39□□□□□ -0.75
RPRD1A-202ENST00000399022 REG3AQ06141 175 aa10.39□□□□□ -0.75
RPRD1A-202ENST00000399022 ETDCA0A1B0GVM5 59 aa10.39□□□□□ -0.75
RPRD1A-202ENST00000399022 UBE2DNLQ8IWF7 75 aa10.38□□□□□ -0.75
RPRD1A-202ENST00000399022 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
RPRD1A-202ENST00000399022 USP34Q70CQ2 3546 aa10.38□□□□□ -0.75
RPRD1A-202ENST00000399022 LOC400499M0QZD8 3231 aa10.38□□□□□ -0.75
RPRD1A-202ENST00000399022 UBE2BP63146 152 aa10.38□□□□□ -0.75
RPRD1A-202ENST00000399022 FLNAP21333 2647 aaKnown RBP10.37□□□□□ -0.75
RPRD1A-202ENST00000399022 CFAP47Q6ZTR5 3102 aa10.37□□□□□ -0.75
RPRD1A-202ENST00000399022 FAM19A4Q96LR4 140 aa10.37□□□□□ -0.75
RPRD1A-202ENST00000399022 IGLV4-60A0A075B6I1 120 aa10.37□□□□□ -0.75
RPRD1A-202ENST00000399022 PSCAO43653 123 aa10.37□□□□□ -0.75
RPRD1A-202ENST00000399022 ATMQ13315 3056 aa10.36□□□□□ -0.75
RPRD1A-202ENST00000399022 PLA2G2AP14555 144 aa10.36□□□□□ -0.75
RPRD1A-202ENST00000399022 CFAP46Q8IYW2 2715 aa10.36□□□□□ -0.75
RPRD1A-202ENST00000399022 LY6G6DO95868 133 aa10.36□□□□□ -0.75
RPRD1A-202ENST00000399022 KALRNO60229 2985 aa10.35□□□□□ -0.75
RPRD1A-202ENST00000399022 C9orf116Q5BN46 136 aaPredicted RBP10.35□□□□□ -0.75
RPRD1A-202ENST00000399022 TNRC18O15417 2968 aaPredicted RBP10.34□□□□□ -0.75
RPRD1A-202ENST00000399022 CELA1Q9UNI1 258 aa10.34□□□□□ -0.75
RPRD1A-202ENST00000399022 A0A087WZ39 114 aa10.34□□□□□ -0.75
RPRD1A-202ENST00000399022 MRPL55Q7Z7F7 128 aaKnown RBP10.33□□□□□ -0.76
RPRD1A-202ENST00000399022 TRBV7-6A0A0J9YX20 115 aa10.33□□□□□ -0.76
RPRD1A-202ENST00000399022 Q6ZVQ6 151 aa10.32□□□□□ -0.76
RPRD1A-202ENST00000399022 ITPR3Q14573 2671 aa10.32□□□□□ -0.76
RPRD1A-202ENST00000399022 Q8IZM0 81 aa10.32□□□□□ -0.76
RPRD1A-202ENST00000399022 A8MTW9 85 aa10.32□□□□□ -0.76
RPRD1A-202ENST00000399022 FHL2Q14192 279 aa10.32□□□□□ -0.76
RPRD1A-202ENST00000399022 LINC01547P58512 204 aaPredicted RBP10.31□□□□□ -0.76
RPRD1A-202ENST00000399022 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
RPRD1A-202ENST00000399022 CD164L2Q6UWJ8 174 aa10.31□□□□□ -0.76
RPRD1A-202ENST00000399022 USP24Q9UPU5 2620 aa10.3□□□□□ -0.76
RPRD1A-202ENST00000399022 TMEM254Q8TBM7 123 aa10.3□□□□□ -0.76
RPRD1A-202ENST00000399022 IGLV5-45A0A087WSX0 123 aa10.29□□□□□ -0.76
RPRD1A-202ENST00000399022 IGLV1-51P01701 117 aa10.29□□□□□ -0.76
RPRD1A-202ENST00000399022 BEAN1Q3B7T3 259 aa10.29□□□□□ -0.76
RPRD1A-202ENST00000399022 FAM30AQ9NZY2 134 aa10.29□□□□□ -0.76
RPRD1A-202ENST00000399022 ZNF575Q86XF7 245 aa10.29□□□□□ -0.76
RPRD1A-202ENST00000399022 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.28□□□□□ -0.76
RPRD1A-202ENST00000399022 DMXL1Q9Y485 3027 aa10.28□□□□□ -0.76
RPRD1A-202ENST00000399022 LYRM9A8MSI8 78 aa10.28□□□□□ -0.76
RPRD1A-202ENST00000399022 F8P00451 2351 aa10.28□□□□□ -0.76
RPRD1A-202ENST00000399022 ZZEF1O43149 2961 aa10.28□□□□□ -0.76
RPRD1A-202ENST00000399022 LINC01561Q8N1V8 128 aa10.27□□□□□ -0.76
RPRD1A-202ENST00000399022 UNQ6190/PRO20217Q6UXQ8 127 aa10.27□□□□□ -0.77
RPRD1A-202ENST00000399022 TACC2O95359 2948 aa10.27□□□□□ -0.77
RPRD1A-202ENST00000399022 TRBV10-3A0A0K0K1G6 114 aa10.27□□□□□ -0.77
RPRD1A-202ENST00000399022 PRYO14603 147 aa10.27□□□□□ -0.77
RPRD1A-202ENST00000399022 ZNF73O43830 326 aaPredicted RBP10.26□□□□□ -0.77
RPRD1A-202ENST00000399022 C11orf72Q8NBR9 251 aa10.26□□□□□ -0.77
RPRD1A-202ENST00000399022 KLK9Q2XQG4 91 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms