RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 TMEM258P61165 79 aa8.38□□□□□ -1.07
PCDHGA8-201ENST00000398604 LELP1Q5T871 98 aa8.38□□□□□ -1.07
PCDHGA8-201ENST00000398604 ATOX1O00244 68 aa8.37□□□□□ -1.07
PCDHGA8-201ENST00000398604 TRBV6-5A0A0K0K1A5 114 aa8.37□□□□□ -1.07
PCDHGA8-201ENST00000398604 KIR2DL5BQ8NHK3 375 aa8.37□□□□□ -1.07
PCDHGA8-201ENST00000398604 POM121L12Q8N7R1 296 aa8.37□□□□□ -1.07
PCDHGA8-201ENST00000398604 LAMA5O15230 3695 aa8.36□□□□□ -1.07
PCDHGA8-201ENST00000398604 RAI1Q7Z5J4 1906 aaPredicted RBP8.36□□□□□ -1.07
PCDHGA8-201ENST00000398604 CRIP2P52943 208 aaPredicted RBP8.36□□□□□ -1.07
PCDHGA8-201ENST00000398604 C9orf116Q5BN46 136 aaPredicted RBP8.36□□□□□ -1.07
PCDHGA8-201ENST00000398604 UNQ6190/PRO20217Q6UXQ8 127 aa8.36□□□□□ -1.07
PCDHGA8-201ENST00000398604 Q6ZTC4 211 aa8.36□□□□□ -1.07
PCDHGA8-201ENST00000398604 BAHCC1Q9P281 2608 aa8.36□□□□□ -1.07
PCDHGA8-201ENST00000398604 UBE2D4Q9Y2X8 147 aa8.36□□□□□ -1.07
PCDHGA8-201ENST00000398604 ZNF292O60281 2723 aa8.36□□□□□ -1.07
PCDHGA8-201ENST00000398604 ZFHX4Q86UP3 3567 aa8.35□□□□□ -1.07
PCDHGA8-201ENST00000398604 CYSRT1A8MQ03 144 aa8.35□□□□□ -1.07
PCDHGA8-201ENST00000398604 H7C423 109 aa8.35□□□□□ -1.07
PCDHGA8-201ENST00000398604 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
PCDHGA8-201ENST00000398604 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
PCDHGA8-201ENST00000398604 WFDC10BQ8IUB3 73 aa8.35□□□□□ -1.07
PCDHGA8-201ENST00000398604 MRPS12O15235 138 aaKnown RBP8.34□□□□□ -1.07
PCDHGA8-201ENST00000398604 IGLV1-51P01701 117 aa8.34□□□□□ -1.07
PCDHGA8-201ENST00000398604 PYGO1Q9Y3Y4 419 aa8.34□□□□□ -1.07
PCDHGA8-201ENST00000398604 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
PCDHGA8-201ENST00000398604 UPK3BQ9BT76 320 aa8.34□□□□□ -1.07
PCDHGA8-201ENST00000398604 PDE6GP18545 87 aa8.34□□□□□ -1.07
PCDHGA8-201ENST00000398604 FLNAP21333 2647 aaKnown RBP8.34□□□□□ -1.08
PCDHGA8-201ENST00000398604 LINC00643Q86TS7 51 aa8.33□□□□□ -1.08
PCDHGA8-201ENST00000398604 SPANXB1Q9NS25 103 aaPredicted RBP8.33□□□□□ -1.08
PCDHGA8-201ENST00000398604 UBE2D3P61077 147 aa8.33□□□□□ -1.08
PCDHGA8-201ENST00000398604 UBE2D2P62837 147 aa8.33□□□□□ -1.08
PCDHGA8-201ENST00000398604 CDC42SE2Q9NRR3 84 aa8.33□□□□□ -1.08
PCDHGA8-201ENST00000398604 H3BQ85 93 aa8.33□□□□□ -1.08
PCDHGA8-201ENST00000398604 ENHOQ6UWT2 76 aa8.33□□□□□ -1.08
PCDHGA8-201ENST00000398604 PRR3P79522 188 aaKnown RBP8.32□□□□□ -1.08
PCDHGA8-201ENST00000398604 IGLV4-60A0A075B6I1 120 aa8.32□□□□□ -1.08
PCDHGA8-201ENST00000398604 A0A096LNJ9 63 aa8.32□□□□□ -1.08
PCDHGA8-201ENST00000398604 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
PCDHGA8-201ENST00000398604 MT-ATP8P03928 68 aa8.31□□□□□ -1.08
PCDHGA8-201ENST00000398604 LINC00694P0DN24 101 aa8.31□□□□□ -1.08
PCDHGA8-201ENST00000398604 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
PCDHGA8-201ENST00000398604 WFDC13Q8IUB5 93 aa8.31□□□□□ -1.08
PCDHGA8-201ENST00000398604 DMXL2Q8TDJ6 3036 aa8.3□□□□□ -1.08
PCDHGA8-201ENST00000398604 ADGRG4Q8IZF6 3080 aa8.3□□□□□ -1.08
PCDHGA8-201ENST00000398604 UBE2D1P51668 147 aa8.3□□□□□ -1.08
PCDHGA8-201ENST00000398604 SMIM11BQ8TCY0 68 aa8.3□□□□□ -1.08
PCDHGA8-201ENST00000398604 PRR4Q16378 134 aa8.29□□□□□ -1.08
PCDHGA8-201ENST00000398604 ZNF580Q9UK33 172 aa8.29□□□□□ -1.08
PCDHGA8-201ENST00000398604 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
PCDHGA8-201ENST00000398604 C6orf223Q8N319 242 aa8.28□□□□□ -1.08
PCDHGA8-201ENST00000398604 CHD6Q8TD26 2715 aa8.28□□□□□ -1.08
PCDHGA8-201ENST00000398604 ATMQ13315 3056 aa8.28□□□□□ -1.08
PCDHGA8-201ENST00000398604 USP17L23D6RBM5 183 aa8.28□□□□□ -1.08
PCDHGA8-201ENST00000398604 IGIPA6NJ69 53 aa8.27□□□□□ -1.09
PCDHGA8-201ENST00000398604 M0R378 163 aa8.27□□□□□ -1.09
PCDHGA8-201ENST00000398604 CNFNQ9BYD5 112 aa8.27□□□□□ -1.09
PCDHGA8-201ENST00000398604 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
PCDHGA8-201ENST00000398604 ZNF73O43830 326 aaPredicted RBP8.26□□□□□ -1.09
PCDHGA8-201ENST00000398604 Q6ZSN1 163 aa8.26□□□□□ -1.09
PCDHGA8-201ENST00000398604 TEX15Q9BXT5 2789 aa8.26□□□□□ -1.09
PCDHGA8-201ENST00000398604 PLAC8L1A1L4L8 177 aa8.25□□□□□ -1.09
PCDHGA8-201ENST00000398604 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
PCDHGA8-201ENST00000398604 MRPS36P82909 103 aaKnown RBP8.25□□□□□ -1.09
PCDHGA8-201ENST00000398604 COX6A2Q02221 97 aa8.25□□□□□ -1.09
PCDHGA8-201ENST00000398604 FHL2Q14192 279 aa8.25□□□□□ -1.09
PCDHGA8-201ENST00000398604 C3orf22Q8N5N4 141 aa8.24□□□□□ -1.09
PCDHGA8-201ENST00000398604 DCHS1Q96JQ0 3298 aa8.24□□□□□ -1.09
PCDHGA8-201ENST00000398604 SMIM1B2RUZ4 78 aa8.23□□□□□ -1.09
PCDHGA8-201ENST00000398604 Q8IZM0 81 aa8.23□□□□□ -1.09
PCDHGA8-201ENST00000398604 NOTCH1P46531 2555 aa8.23□□□□□ -1.09
PCDHGA8-201ENST00000398604 NDUFV3P56181 108 aaKnown RBP8.22□□□□□ -1.09
PCDHGA8-201ENST00000398604 MPLKIPQ8TAP9 179 aa8.22□□□□□ -1.09
PCDHGA8-201ENST00000398604 TRBV10-3A0A0K0K1G6 114 aa8.22□□□□□ -1.09
PCDHGA8-201ENST00000398604 M0QXV9 152 aa8.22□□□□□ -1.09
PCDHGA8-201ENST00000398604 SEC61GP60059 68 aa8.21□□□□□ -1.1
PCDHGA8-201ENST00000398604 NBEAL1Q6ZS30 2694 aa8.21□□□□□ -1.1
PCDHGA8-201ENST00000398604 LST1O00453 97 aa8.21□□□□□ -1.1
PCDHGA8-201ENST00000398604 CHCHD7Q9BUK0 85 aa8.21□□□□□ -1.1
PCDHGA8-201ENST00000398604 C16orf95Q9H693 158 aa8.21□□□□□ -1.1
PCDHGA8-201ENST00000398604 SPENQ96T58 3664 aaKnown RBP8.2□□□□□ -1.1
PCDHGA8-201ENST00000398604 TIMM17BO60830 172 aa8.2□□□□□ -1.1
PCDHGA8-201ENST00000398604 A8MTW9 85 aa8.2□□□□□ -1.1
PCDHGA8-201ENST00000398604 TSPEAR-AS2P59090 65 aa8.2□□□□□ -1.1
PCDHGA8-201ENST00000398604 SPTSSBQ8NFR3 76 aa8.2□□□□□ -1.1
PCDHGA8-201ENST00000398604 SMG1Q96Q15 3661 aaKnown RBP8.19□□□□□ -1.1
PCDHGA8-201ENST00000398604 COX8CQ7Z4L0 72 aa8.19□□□□□ -1.1
PCDHGA8-201ENST00000398604 DHRS4-AS1Q9P1J3 65 aa8.19□□□□□ -1.1
PCDHGA8-201ENST00000398604 CELA1Q9UNI1 258 aa8.19□□□□□ -1.1
PCDHGA8-201ENST00000398604 SNURFQ9Y675 71 aa8.19□□□□□ -1.1
PCDHGA8-201ENST00000398604 ADAMTSL4-AS1Q5T5F5 129 aa8.19□□□□□ -1.1
PCDHGA8-201ENST00000398604 CIRBP-AS1Q8TBR5 109 aa8.18□□□□□ -1.1
PCDHGA8-201ENST00000398604 EGFEM1PQ0D2K5 195 aa8.18□□□□□ -1.1
PCDHGA8-201ENST00000398604 COL6A5A8TX70 2615 aa8.17□□□□□ -1.1
PCDHGA8-201ENST00000398604 NUPR2A6NF83 97 aa8.17□□□□□ -1.1
PCDHGA8-201ENST00000398604 NTM-AS1Q6ZSK4 140 aa8.17□□□□□ -1.1
PCDHGA8-201ENST00000398604 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
PCDHGA8-201ENST00000398604 J3KT08 172 aa8.16□□□□□ -1.1
PCDHGA8-201ENST00000398604 BRK1Q8WUW1 75 aa8.16□□□□□ -1.1
PCDHGA8-201ENST00000398604 IGLV5-52A0A0A0MRZ9 124 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms