RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 GAGE2AQ6NT46 116 aa9.34□□□□□ -0.91
TRIM40-207ENST00000396581 C16orf74Q96GX8 76 aa9.34□□□□□ -0.91
TRIM40-207ENST00000396581 JMJD1CQ15652 2540 aa9.34□□□□□ -0.91
TRIM40-207ENST00000396581 A0A087WYN8 130 aa9.33□□□□□ -0.92
TRIM40-207ENST00000396581 A0A087WZ39 114 aa9.33□□□□□ -0.92
TRIM40-207ENST00000396581 NIPBLQ6KC79 2804 aaeCLIP9.32□□□□□ -0.92
TRIM40-207ENST00000396581 C2orf48Q96LS8 159 aa9.32□□□□□ -0.92
TRIM40-207ENST00000396581 BAHCC1Q9P281 2608 aa9.32□□□□□ -0.92
TRIM40-207ENST00000396581 LOC100131303A0A0U1RQF7 123 aa9.32□□□□□ -0.92
TRIM40-207ENST00000396581 DNAL4O96015 105 aa9.32□□□□□ -0.92
TRIM40-207ENST00000396581 KLK5Q9Y337 293 aaPredicted RBP9.32□□□□□ -0.92
TRIM40-207ENST00000396581 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
TRIM40-207ENST00000396581 COX7CP15954 63 aa9.31□□□□□ -0.92
TRIM40-207ENST00000396581 CMC4P56277 68 aaPredicted RBP9.31□□□□□ -0.92
TRIM40-207ENST00000396581 LINC00158P58513 81 aa9.31□□□□□ -0.92
TRIM40-207ENST00000396581 C9orf129Q5T035 196 aaKnown RBP9.31□□□□□ -0.92
TRIM40-207ENST00000396581 C9orf153Q5TBE3 101 aa9.31□□□□□ -0.92
TRIM40-207ENST00000396581 TRBV6-8A0A0A6YYG3 113 aa9.3□□□□□ -0.92
TRIM40-207ENST00000396581 KRTAP10-3P60369 221 aa9.3□□□□□ -0.92
TRIM40-207ENST00000396581 TOMM7Q9P0U1 55 aa9.3□□□□□ -0.92
TRIM40-207ENST00000396581 ATOX1O00244 68 aa9.29□□□□□ -0.92
TRIM40-207ENST00000396581 Q6JHZ5 121 aa9.29□□□□□ -0.92
TRIM40-207ENST00000396581 CSNK1G2-AS1Q8NCQ2 148 aa9.29□□□□□ -0.92
TRIM40-207ENST00000396581 TRGV2A0A075B6R0 118 aa9.28□□□□□ -0.92
TRIM40-207ENST00000396581 CRYGAP11844 174 aa9.28□□□□□ -0.92
TRIM40-207ENST00000396581 C3orf56Q8N813 242 aa9.28□□□□□ -0.92
TRIM40-207ENST00000396581 FHL2Q14192 279 aa9.28□□□□□ -0.92
TRIM40-207ENST00000396581 C14orf132Q9NPU4 83 aa9.28□□□□□ -0.92
TRIM40-207ENST00000396581 C19orf73Q9NVV2 129 aa9.27□□□□□ -0.93
TRIM40-207ENST00000396581 LINC00167Q96N53 147 aa9.27□□□□□ -0.93
TRIM40-207ENST00000396581 LINC00846Q9NV44 126 aa9.27□□□□□ -0.93
TRIM40-207ENST00000396581 ATRQ13535 2644 aa9.26□□□□□ -0.93
TRIM40-207ENST00000396581 TRGV4A0A0C4DH28 118 aa9.26□□□□□ -0.93
TRIM40-207ENST00000396581 LECT2O14960 151 aa9.26□□□□□ -0.93
TRIM40-207ENST00000396581 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
TRIM40-207ENST00000396581 SS18Q15532 418 aa9.25□□□□□ -0.93
TRIM40-207ENST00000396581 TENM1Q9UKZ4 2725 aa9.25□□□□□ -0.93
TRIM40-207ENST00000396581 A0A1B0GX51 115 aa9.25□□□□□ -0.93
TRIM40-207ENST00000396581 RPL18AQ02543 176 aaKnown RBP9.25□□□□□ -0.93
TRIM40-207ENST00000396581 LINC01561Q8N1V8 128 aa9.25□□□□□ -0.93
TRIM40-207ENST00000396581 IGKV3OR2-268A0A0C4DH90 116 aa9.24□□□□□ -0.93
TRIM40-207ENST00000396581 IGLV1-51P01701 117 aa9.24□□□□□ -0.93
TRIM40-207ENST00000396581 PFN2P35080 140 aa9.24□□□□□ -0.93
TRIM40-207ENST00000396581 NOTCH3Q9UM47 2321 aa9.24□□□□□ -0.93
TRIM40-207ENST00000396581 PAX4O43316 350 aa9.24□□□□□ -0.93
TRIM40-207ENST00000396581 TEP1Q99973 2627 aaKnown RBP9.23□□□□□ -0.93
TRIM40-207ENST00000396581 Q8IZM0 81 aa9.23□□□□□ -0.93
TRIM40-207ENST00000396581 ORMDL1Q9P0S3 153 aa9.23□□□□□ -0.93
TRIM40-207ENST00000396581 A0A1B0GUV1 79 aa9.22□□□□□ -0.93
TRIM40-207ENST00000396581 NCR3O14931 201 aa9.22□□□□□ -0.93
TRIM40-207ENST00000396581 LINC00612Q8N6U2 182 aa9.22□□□□□ -0.93
TRIM40-207ENST00000396581 LINC00482Q8N8I6 264 aa9.22□□□□□ -0.93
TRIM40-207ENST00000396581 WFDC10AQ9H1F0 79 aa9.22□□□□□ -0.93
TRIM40-207ENST00000396581 VWFP04275 2813 aa9.21□□□□□ -0.93
TRIM40-207ENST00000396581 CCKP06307 115 aa9.21□□□□□ -0.93
TRIM40-207ENST00000396581 C6orf226Q5I0X4 101 aa9.21□□□□□ -0.93
TRIM40-207ENST00000396581 NANOS2P60321 138 aaKnown RBP9.2□□□□□ -0.94
TRIM40-207ENST00000396581 OR13C6PQ8NH95 151 aa9.2□□□□□ -0.94
TRIM40-207ENST00000396581 NDUFC2O95298 119 aa9.2□□□□□ -0.94
TRIM40-207ENST00000396581 RPL35AP18077 110 aaKnown RBP9.2□□□□□ -0.94
TRIM40-207ENST00000396581 KIR2DL5BQ8NHK3 375 aa9.2□□□□□ -0.94
TRIM40-207ENST00000396581 IGKV3D-7A0A0C4DH55 119 aa9.19□□□□□ -0.94
TRIM40-207ENST00000396581 SLPIP03973 132 aa9.19□□□□□ -0.94
TRIM40-207ENST00000396581 JMJD7-PLA2G4BH0Y9G9 81 aa9.19□□□□□ -0.94
TRIM40-207ENST00000396581 RPS28P62857 69 aaKnown RBP9.19□□□□□ -0.94
TRIM40-207ENST00000396581 SERP2Q8N6R1 65 aa9.19□□□□□ -0.94
TRIM40-207ENST00000396581 UPK3BQ9BT76 320 aa9.19□□□□□ -0.94
TRIM40-207ENST00000396581 LYPD5Q6UWN5 251 aa9.17□□□□□ -0.94
TRIM40-207ENST00000396581 Q8N814 137 aa9.17□□□□□ -0.94
TRIM40-207ENST00000396581 COX17Q14061 63 aa9.17□□□□□ -0.94
TRIM40-207ENST00000396581 ATP5EP2Q5VTU8 51 aa9.17□□□□□ -0.94
TRIM40-207ENST00000396581 hADV29S1A0JD25 119 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 CYSRT1A8MQ03 144 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 J3KT08 172 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 TMEM256-PLSCR3K7ERE1 68 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 XCL1P47992 114 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 S100A7L2Q5SY68 101 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 CYSTM1Q9H1C7 97 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 A0A087WVE0 104 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 USP17L23D6RBM5 183 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 KIAA0087Q14695 138 aa9.16□□□□□ -0.94
TRIM40-207ENST00000396581 IGHV4-28A0A0C4DH34 117 aa9.15□□□□□ -0.94
TRIM40-207ENST00000396581 GYPEP15421 78 aa9.14□□□□□ -0.95
TRIM40-207ENST00000396581 TMEM258P61165 79 aa9.14□□□□□ -0.95
TRIM40-207ENST00000396581 C11orf68Q9H3H3 251 aaKnown RBP9.14□□□□□ -0.95
TRIM40-207ENST00000396581 CFAP161Q6P656 301 aa9.13□□□□□ -0.95
TRIM40-207ENST00000396581 MAST4O15021 2626 aa9.13□□□□□ -0.95
TRIM40-207ENST00000396581 TRBV10-3A0A0K0K1G6 114 aa9.12□□□□□ -0.95
TRIM40-207ENST00000396581 LOC107984640A0A0U1RRK4 108 aa9.12□□□□□ -0.95
TRIM40-207ENST00000396581 SPATA3Q8NHX4 192 aa9.12□□□□□ -0.95
TRIM40-207ENST00000396581 TRRAPQ9Y4A5 3859 aa9.12□□□□□ -0.95
TRIM40-207ENST00000396581 C9orf66Q5T8R8 295 aa9.12□□□□□ -0.95
TRIM40-207ENST00000396581 CD164L2Q6UWJ8 174 aa9.12□□□□□ -0.95
TRIM40-207ENST00000396581 DEFB130BP0DP73 79 aa9.11□□□□□ -0.95
TRIM40-207ENST00000396581 DEFB130AP0DP74 79 aa9.11□□□□□ -0.95
TRIM40-207ENST00000396581 PRR3P79522 188 aaKnown RBP9.11□□□□□ -0.95
TRIM40-207ENST00000396581 WFDC9Q8NEX5 89 aa9.11□□□□□ -0.95
TRIM40-207ENST00000396581 PRO0255Q9UI72 69 aa9.11□□□□□ -0.95
TRIM40-207ENST00000396581 KRTAP24-1Q3LI83 254 aa9.1□□□□□ -0.95
TRIM40-207ENST00000396581 LINC00575Q6W349 94 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms