RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 XCL1P47992 114 aa11.43□□□□□ -0.58
TRIM39-205ENST00000396551 XGP55808 180 aa11.42□□□□□ -0.58
TRIM39-205ENST00000396551 Q8N3U1 123 aa11.42□□□□□ -0.58
TRIM39-205ENST00000396551 SS18Q15532 418 aa11.41□□□□□ -0.58
TRIM39-205ENST00000396551 C2orf82Q6UX34 121 aa11.41□□□□□ -0.58
TRIM39-205ENST00000396551 IGHV4-30-4P0DP06 118 aa11.41□□□□□ -0.58
TRIM39-205ENST00000396551 TEX49A0A1B0GTD5 131 aa11.41□□□□□ -0.58
TRIM39-205ENST00000396551 WIPF1O43516 503 aa11.41□□□□□ -0.58
TRIM39-205ENST00000396551 MIFP14174 115 aa11.41□□□□□ -0.58
TRIM39-205ENST00000396551 LINC00158P58513 81 aa11.41□□□□□ -0.58
TRIM39-205ENST00000396551 COX7A2LO14548 114 aa11.4□□□□□ -0.58
TRIM39-205ENST00000396551 IGKV2-28A0A075B6P5 120 aa11.4□□□□□ -0.58
TRIM39-205ENST00000396551 H3BT86 120 aa11.4□□□□□ -0.58
TRIM39-205ENST00000396551 IGKV2D-28P01615 120 aa11.4□□□□□ -0.58
TRIM39-205ENST00000396551 C11orf68Q9H3H3 251 aaKnown RBP11.39□□□□□ -0.59
TRIM39-205ENST00000396551 IBA57-AS1B1ANH7 110 aa11.39□□□□□ -0.59
TRIM39-205ENST00000396551 ATP5G1P05496 136 aa11.39□□□□□ -0.59
TRIM39-205ENST00000396551 LINC00337Q8N6G1 96 aa11.39□□□□□ -0.59
TRIM39-205ENST00000396551 LOC107984640A0A0U1RRK4 108 aa11.39□□□□□ -0.59
TRIM39-205ENST00000396551 CCL18P55774 89 aa11.38□□□□□ -0.59
TRIM39-205ENST00000396551 LINC00269Q8N2A0 174 aa11.38□□□□□ -0.59
TRIM39-205ENST00000396551 SND1-IT1Q9HBX3 110 aa11.38□□□□□ -0.59
TRIM39-205ENST00000396551 PFN2P35080 140 aa11.38□□□□□ -0.59
TRIM39-205ENST00000396551 UBE2WQ96B02 151 aa11.37□□□□□ -0.59
TRIM39-205ENST00000396551 C6orf226Q5I0X4 101 aa11.37□□□□□ -0.59
TRIM39-205ENST00000396551 NHLRC4P0CG21 123 aaPredicted RBP11.37□□□□□ -0.59
TRIM39-205ENST00000396551 SPART-AS1P0CW21 52 aa11.36□□□□□ -0.59
TRIM39-205ENST00000396551 Q8IZM0 81 aa11.36□□□□□ -0.59
TRIM39-205ENST00000396551 TRAV13-2A0A0B4J235 113 aa11.35□□□□□ -0.59
TRIM39-205ENST00000396551 CRPP02741 224 aa11.35□□□□□ -0.59
TRIM39-205ENST00000396551 HTN3P15516 51 aa11.35□□□□□ -0.59
TRIM39-205ENST00000396551 LINC01561Q8N1V8 128 aa11.35□□□□□ -0.59
TRIM39-205ENST00000396551 FAM218AQ96MZ4 157 aa11.35□□□□□ -0.59
TRIM39-205ENST00000396551 ANGP03950 147 aaKnown RBP11.34□□□□□ -0.59
TRIM39-205ENST00000396551 IGLV10-54A0A075B6I4 117 aa11.33□□□□□ -0.59
TRIM39-205ENST00000396551 RPL28P46779 137 aaKnown RBP11.33□□□□□ -0.59
TRIM39-205ENST00000396551 CHCHD10Q8WYQ3 142 aaPredicted RBP11.33□□□□□ -0.59
TRIM39-205ENST00000396551 REG3AQ06141 175 aa11.33□□□□□ -0.6
TRIM39-205ENST00000396551 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
TRIM39-205ENST00000396551 KIAA0087Q14695 138 aa11.33□□□□□ -0.6
TRIM39-205ENST00000396551 OXLD1Q5BKU9 147 aa11.32□□□□□ -0.6
TRIM39-205ENST00000396551 TRACP01848 142 aa11.3□□□□□ -0.6
TRIM39-205ENST00000396551 KRTAP10-11P60412 298 aa11.3□□□□□ -0.6
TRIM39-205ENST00000396551 SMIM11BQ8TCY0 68 aa11.3□□□□□ -0.6
TRIM39-205ENST00000396551 TRAV8-4A0A0B4J246 113 aa11.3□□□□□ -0.6
TRIM39-205ENST00000396551 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
TRIM39-205ENST00000396551 LELP1Q5T871 98 aa11.3□□□□□ -0.6
TRIM39-205ENST00000396551 F8P00451 2351 aa11.28□□□□□ -0.6
TRIM39-205ENST00000396551 RETNQ9HD89 108 aa11.28□□□□□ -0.6
TRIM39-205ENST00000396551 TTC32Q5I0X7 151 aa11.28□□□□□ -0.6
TRIM39-205ENST00000396551 C22orf24Q9Y442 160 aa11.28□□□□□ -0.6
TRIM39-205ENST00000396551 CMYA5Q8N3K9 4069 aa11.27□□□□□ -0.61
TRIM39-205ENST00000396551 NDUFV3P56181 108 aaKnown RBP11.26□□□□□ -0.61
TRIM39-205ENST00000396551 MALP21145 153 aa11.26□□□□□ -0.61
TRIM39-205ENST00000396551 KRTAP24-1Q3LI83 254 aa11.26□□□□□ -0.61
TRIM39-205ENST00000396551 BAALC-AS2P0C853 105 aa11.24□□□□□ -0.61
TRIM39-205ENST00000396551 Q9HAA7 133 aa11.24□□□□□ -0.61
TRIM39-205ENST00000396551 A0A087WYN8 130 aa11.24□□□□□ -0.61
TRIM39-205ENST00000396551 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
TRIM39-205ENST00000396551 CXCL5P42830 114 aa11.24□□□□□ -0.61
TRIM39-205ENST00000396551 LYPD5Q6UWN5 251 aa11.24□□□□□ -0.61
TRIM39-205ENST00000396551 PRR34Q9NV39 138 aa11.24□□□□□ -0.61
TRIM39-205ENST00000396551 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
TRIM39-205ENST00000396551 OR13C6PQ8NH95 151 aa11.23□□□□□ -0.61
TRIM39-205ENST00000396551 KLK12Q9UKR0 248 aa11.23□□□□□ -0.61
TRIM39-205ENST00000396551 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
TRIM39-205ENST00000396551 GAGE2EQ4V326 116 aa11.22□□□□□ -0.61
TRIM39-205ENST00000396551 GAGE2DQ9UEU5 116 aa11.22□□□□□ -0.61
TRIM39-205ENST00000396551 ENHOQ6UWT2 76 aa11.22□□□□□ -0.61
TRIM39-205ENST00000396551 PRR3P79522 188 aaKnown RBP11.22□□□□□ -0.61
TRIM39-205ENST00000396551 ANK2Q01484 3957 aa11.21□□□□□ -0.61
TRIM39-205ENST00000396551 COX17Q14061 63 aa11.21□□□□□ -0.61
TRIM39-205ENST00000396551 C6orf223Q8N319 242 aa11.21□□□□□ -0.61
TRIM39-205ENST00000396551 EGFEM1PQ0D2K5 195 aa11.2□□□□□ -0.62
TRIM39-205ENST00000396551 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
TRIM39-205ENST00000396551 KLK5Q9Y337 293 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-205ENST00000396551 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
TRIM39-205ENST00000396551 LINC00526Q96FQ7 95 aa11.2□□□□□ -0.62
TRIM39-205ENST00000396551 FAM240AA0A1B0GVK7 77 aa11.19□□□□□ -0.62
TRIM39-205ENST00000396551 H0YGX0 51 aa11.19□□□□□ -0.62
TRIM39-205ENST00000396551 Q8NDZ9 215 aa11.19□□□□□ -0.62
TRIM39-205ENST00000396551 FBN1P35555 2871 aaKnown RBP11.19□□□□□ -0.62
TRIM39-205ENST00000396551 SPAG11BQ08648 103 aa11.19□□□□□ -0.62
TRIM39-205ENST00000396551 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
TRIM39-205ENST00000396551 Q6ZTC4 211 aa11.18□□□□□ -0.62
TRIM39-205ENST00000396551 C15orf53Q8NAA6 179 aa11.18□□□□□ -0.62
TRIM39-205ENST00000396551 KPRPQ5T749 579 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-205ENST00000396551 NDUFC2O95298 119 aa11.17□□□□□ -0.62
TRIM39-205ENST00000396551 WFDC10BQ8IUB3 73 aa11.17□□□□□ -0.62
TRIM39-205ENST00000396551 PKD1L1Q8TDX9 2849 aa11.16□□□□□ -0.62
TRIM39-205ENST00000396551 SNCGO76070 127 aa11.16□□□□□ -0.62
TRIM39-205ENST00000396551 LECT2O14960 151 aa11.16□□□□□ -0.62
TRIM39-205ENST00000396551 DNAH3Q8TD57 4116 aa11.16□□□□□ -0.62
TRIM39-205ENST00000396551 H3BNG1 76 aa11.15□□□□□ -0.62
TRIM39-205ENST00000396551 CYSRT1A8MQ03 144 aa11.15□□□□□ -0.62
TRIM39-205ENST00000396551 DNAL4O96015 105 aa11.14□□□□□ -0.63
TRIM39-205ENST00000396551 STAB1Q9NY15 2570 aa11.14□□□□□ -0.63
TRIM39-205ENST00000396551 C9orf129Q5T035 196 aaKnown RBP11.14□□□□□ -0.63
TRIM39-205ENST00000396551 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
TRIM39-205ENST00000396551 A0A0J9YWU9 116 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms