RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
TRIM39-203ENST00000396547 RNF152Q8N8N0 203 aa6.98□□□□□ -1.29
TRIM39-203ENST00000396547 RPL18AQ02543 176 aaKnown RBP6.97□□□□□ -1.29
TRIM39-203ENST00000396547 TMEM243Q9BU79 118 aa6.97□□□□□ -1.29
TRIM39-203ENST00000396547 NF1P21359 2839 aa6.97□□□□□ -1.29
TRIM39-203ENST00000396547 ITPR3Q14573 2671 aa6.97□□□□□ -1.29
TRIM39-203ENST00000396547 K7EQD1 137 aa6.97□□□□□ -1.29
TRIM39-203ENST00000396547 CXCL5P42830 114 aa6.97□□□□□ -1.29
TRIM39-203ENST00000396547 RPL28P46779 137 aaKnown RBP6.97□□□□□ -1.29
TRIM39-203ENST00000396547 CLPSL2Q6UWE3 100 aa6.97□□□□□ -1.29
TRIM39-203ENST00000396547 TRAV23DV6A0A075B6W5 121 aa6.96□□□□□ -1.3
TRIM39-203ENST00000396547 FLNAP21333 2647 aaKnown RBP6.96□□□□□ -1.3
TRIM39-203ENST00000396547 USP17L23D6RBM5 183 aa6.96□□□□□ -1.3
TRIM39-203ENST00000396547 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.3
TRIM39-203ENST00000396547 IGLV4-60A0A075B6I1 120 aa6.95□□□□□ -1.3
TRIM39-203ENST00000396547 IGHV4-31P0DP07 118 aa6.95□□□□□ -1.3
TRIM39-203ENST00000396547 C1orf158Q8N1D5 194 aa6.95□□□□□ -1.3
TRIM39-203ENST00000396547 NBEAL2Q6ZNJ1 2754 aa6.95□□□□□ -1.3
TRIM39-203ENST00000396547 RPL35AP18077 110 aaKnown RBP6.95□□□□□ -1.3
TRIM39-203ENST00000396547 FAM222AQ5U5X8 452 aa6.95□□□□□ -1.3
TRIM39-203ENST00000396547 TRGV4A0A0C4DH28 118 aa6.94□□□□□ -1.3
TRIM39-203ENST00000396547 J3QLI3 93 aa6.94□□□□□ -1.3
TRIM39-203ENST00000396547 CRYGAP11844 174 aa6.94□□□□□ -1.3
TRIM39-203ENST00000396547 LINC01561Q8N1V8 128 aa6.94□□□□□ -1.3
TRIM39-203ENST00000396547 ZNF702PQ9H963 129 aa6.94□□□□□ -1.3
TRIM39-203ENST00000396547 LY6G6DO95868 133 aa6.94□□□□□ -1.3
TRIM39-203ENST00000396547 FSHBP01225 129 aa6.94□□□□□ -1.3
TRIM39-203ENST00000396547 XCL1P47992 114 aa6.94□□□□□ -1.3
TRIM39-203ENST00000396547 A0A096LPF7 62 aa6.93□□□□□ -1.3
TRIM39-203ENST00000396547 DEFB114Q30KQ6 69 aa6.93□□□□□ -1.3
TRIM39-203ENST00000396547 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
TRIM39-203ENST00000396547 WFDC10AQ9H1F0 79 aa6.93□□□□□ -1.3
TRIM39-203ENST00000396547 FAM19A1Q7Z5A9 133 aa6.93□□□□□ -1.3
TRIM39-203ENST00000396547 MAST4O15021 2626 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 C4orf26Q17RF5 130 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 ODF3L2Q3SX64 289 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 LINC01356Q8N9X3 169 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 H0YGX0 51 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 PF4P02776 101 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 ENHOQ6UWT2 76 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 DPH3Q96FX2 82 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 SEC61GP60059 68 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 HRCT1Q6UXD1 115 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 ORMDL1Q9P0S3 153 aa6.92□□□□□ -1.3
TRIM39-203ENST00000396547 GHRHP01286 108 aa6.91□□□□□ -1.3
TRIM39-203ENST00000396547 MRAPQ8TCY5 172 aa6.91□□□□□ -1.3
TRIM39-203ENST00000396547 Q6JHZ5 121 aa6.91□□□□□ -1.3
TRIM39-203ENST00000396547 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
TRIM39-203ENST00000396547 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
TRIM39-203ENST00000396547 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
TRIM39-203ENST00000396547 OVOL2Q9BRP0 275 aa6.9□□□□□ -1.3
TRIM39-203ENST00000396547 HIVEP1P15822 2718 aa6.9□□□□□ -1.31
TRIM39-203ENST00000396547 OXTP01178 125 aa6.9□□□□□ -1.31
TRIM39-203ENST00000396547 TRBV10-1A0A0K0K1A3 114 aa6.89□□□□□ -1.31
TRIM39-203ENST00000396547 MTORP42345 2549 aa6.88□□□□□ -1.31
TRIM39-203ENST00000396547 A8MTW9 85 aa6.88□□□□□ -1.31
TRIM39-203ENST00000396547 FHL2Q14192 279 aa6.88□□□□□ -1.31
TRIM39-203ENST00000396547 IGLV10-54A0A075B6I4 117 aa6.88□□□□□ -1.31
TRIM39-203ENST00000396547 IGHV3OR16-9A0A0B4J2B5 98 aa6.87□□□□□ -1.31
TRIM39-203ENST00000396547 TMEM258P61165 79 aa6.87□□□□□ -1.31
TRIM39-203ENST00000396547 HAMPP81172 84 aa6.87□□□□□ -1.31
TRIM39-203ENST00000396547 C9orf116Q5BN46 136 aaPredicted RBP6.87□□□□□ -1.31
TRIM39-203ENST00000396547 TMEM86BQ8N661 226 aa6.87□□□□□ -1.31
TRIM39-203ENST00000396547 IBA57-AS1B1ANH7 110 aa6.87□□□□□ -1.31
TRIM39-203ENST00000396547 CCKP06307 115 aa6.87□□□□□ -1.31
TRIM39-203ENST00000396547 TRBV6-4A0A1B0GX49 114 aa6.86□□□□□ -1.31
TRIM39-203ENST00000396547 Q6YL49 198 aa6.86□□□□□ -1.31
TRIM39-203ENST00000396547 C1orf43Q9BWL3 253 aa6.86□□□□□ -1.31
TRIM39-203ENST00000396547 UPK3BQ9BT76 320 aa6.86□□□□□ -1.31
TRIM39-203ENST00000396547 TRBV6-8A0A0A6YYG3 113 aa6.85□□□□□ -1.31
TRIM39-203ENST00000396547 FAM19A3Q7Z5A8 133 aa6.85□□□□□ -1.31
TRIM39-203ENST00000396547 LAMTOR3Q9UHA4 124 aa6.85□□□□□ -1.31
TRIM39-203ENST00000396547 SS18Q15532 418 aa6.85□□□□□ -1.31
TRIM39-203ENST00000396547 LINC00959A0A1B0GUT2 108 aa6.85□□□□□ -1.31
TRIM39-203ENST00000396547 ESM1Q9NQ30 184 aa6.85□□□□□ -1.31
TRIM39-203ENST00000396547 PKIGQ9Y2B9 76 aa6.85□□□□□ -1.31
TRIM39-203ENST00000396547 RPS28P62857 69 aaKnown RBP6.84□□□□□ -1.31
TRIM39-203ENST00000396547 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
TRIM39-203ENST00000396547 A0A087WZ39 114 aa6.84□□□□□ -1.31
TRIM39-203ENST00000396547 C6orf99Q4VX62 202 aa6.84□□□□□ -1.31
TRIM39-203ENST00000396547 C4orf3Q8WVX3 66 aa6.84□□□□□ -1.31
TRIM39-203ENST00000396547 SNURFQ9Y675 71 aa6.84□□□□□ -1.31
TRIM39-203ENST00000396547 Q8N814 137 aa6.83□□□□□ -1.32
TRIM39-203ENST00000396547 S100A7L2Q5SY68 101 aa6.83□□□□□ -1.32
TRIM39-203ENST00000396547 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
TRIM39-203ENST00000396547 SCXQ7RTU7 201 aa6.83□□□□□ -1.32
TRIM39-203ENST00000396547 LINC00269Q8N2A0 174 aa6.83□□□□□ -1.32
TRIM39-203ENST00000396547 SMR3AQ99954 134 aa6.83□□□□□ -1.32
TRIM39-203ENST00000396547 CCL24O00175 119 aa6.82□□□□□ -1.32
TRIM39-203ENST00000396547 Q5XG85 94 aa6.82□□□□□ -1.32
TRIM39-203ENST00000396547 GYPEP15421 78 aa6.82□□□□□ -1.32
TRIM39-203ENST00000396547 TEP1Q99973 2627 aaKnown RBP6.82□□□□□ -1.32
TRIM39-203ENST00000396547 M0R2N4 97 aa6.81□□□□□ -1.32
TRIM39-203ENST00000396547 Q8N3U1 123 aa6.81□□□□□ -1.32
TRIM39-203ENST00000396547 INAFM1C9JVW0 142 aa6.81□□□□□ -1.32
TRIM39-203ENST00000396547 JMJD7-PLA2G4BH0Y9G9 81 aa6.81□□□□□ -1.32
TRIM39-203ENST00000396547 TMEM256-PLSCR3K7ERE1 68 aa6.81□□□□□ -1.32
TRIM39-203ENST00000396547 IL17DQ8TAD2 202 aa6.81□□□□□ -1.32
TRIM39-203ENST00000396547 F8P00451 2351 aa6.81□□□□□ -1.32
TRIM39-203ENST00000396547 GIG44P09565 113 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms