RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 Q9UF83 564 aa6.9□□□□□ -1.3
CDRT1-204ENST00000395906 IGHV3-49A0A0A0MS15 119 aa6.9□□□□□ -1.31
CDRT1-204ENST00000395906 SLPIP03973 132 aa6.9□□□□□ -1.31
CDRT1-204ENST00000395906 COX7A1P24310 79 aa6.9□□□□□ -1.31
CDRT1-204ENST00000395906 FUSP35637 526 aaKnown RBP eCLIP6.9□□□□□ -1.31
CDRT1-204ENST00000395906 RPL36AP83881 106 aaKnown RBP6.89□□□□□ -1.31
CDRT1-204ENST00000395906 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
CDRT1-204ENST00000395906 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
CDRT1-204ENST00000395906 Q6ZTC4 211 aa6.89□□□□□ -1.31
CDRT1-204ENST00000395906 KTN1-AS1Q86SY8 53 aa6.89□□□□□ -1.31
CDRT1-204ENST00000395906 IGKV2-28A0A075B6P5 120 aa6.88□□□□□ -1.31
CDRT1-204ENST00000395906 IGKV2D-28P01615 120 aa6.88□□□□□ -1.31
CDRT1-204ENST00000395906 PLA2G2AP14555 144 aa6.87□□□□□ -1.31
CDRT1-204ENST00000395906 KAAG1Q9UBP8 84 aa6.87□□□□□ -1.31
CDRT1-204ENST00000395906 PRYO14603 147 aa6.87□□□□□ -1.31
CDRT1-204ENST00000395906 CXCL6P80162 114 aa6.87□□□□□ -1.31
CDRT1-204ENST00000395906 NREPQ16612 68 aa6.87□□□□□ -1.31
CDRT1-204ENST00000395906 LINC00167Q96N53 147 aa6.87□□□□□ -1.31
CDRT1-204ENST00000395906 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
CDRT1-204ENST00000395906 IGHV1OR15-1A0A075B7D0 117 aa6.86□□□□□ -1.31
CDRT1-204ENST00000395906 IGHV4-30-2A0A087WSY4 118 aa6.86□□□□□ -1.31
CDRT1-204ENST00000395906 TEP1Q99973 2627 aaKnown RBP6.86□□□□□ -1.31
CDRT1-204ENST00000395906 IGHV4-61A0A0C4DH41 118 aa6.86□□□□□ -1.31
CDRT1-204ENST00000395906 TMEM256-PLSCR3K7ERE1 68 aa6.86□□□□□ -1.31
CDRT1-204ENST00000395906 Q8N3U1 123 aa6.86□□□□□ -1.31
CDRT1-204ENST00000395906 IGHV3-38A0A0C4DH36 116 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 KLLNB2CW77 178 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 J3QKU1 62 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 HAMPP81172 84 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 COX6A2Q02221 97 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 CHCHD7Q9BUK0 85 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 IGHV3-16A0A0C4DH30 117 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 hDV103S1A0JD37 113 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 DEFB1P60022 68 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 Q6ZRP5 223 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 Q6ZTI0 123 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 C11orf45Q8TAV5 145 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 JMJD1CQ15652 2540 aa6.85□□□□□ -1.31
CDRT1-204ENST00000395906 LMO4P61968 165 aa6.84□□□□□ -1.31
CDRT1-204ENST00000395906 CLEC19AQ6UXS0 136 aa6.84□□□□□ -1.31
CDRT1-204ENST00000395906 UBE2E2Q96LR5 201 aa6.84□□□□□ -1.31
CDRT1-204ENST00000395906 LYRM9A8MSI8 78 aa6.83□□□□□ -1.32
CDRT1-204ENST00000395906 KLK9Q9UKQ9 250 aa6.83□□□□□ -1.32
CDRT1-204ENST00000395906 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-204ENST00000395906 APOC4P55056 127 aa6.83□□□□□ -1.32
CDRT1-204ENST00000395906 Q6ZVQ6 151 aa6.83□□□□□ -1.32
CDRT1-204ENST00000395906 Q8N6K4 173 aa6.83□□□□□ -1.32
CDRT1-204ENST00000395906 LINC00588Q9Y4M8 146 aa6.83□□□□□ -1.32
CDRT1-204ENST00000395906 HIVEP1P15822 2718 aa6.83□□□□□ -1.32
CDRT1-204ENST00000395906 KLK9Q2XQG4 91 aa6.82□□□□□ -1.32
CDRT1-204ENST00000395906 M0R378 163 aa6.82□□□□□ -1.32
CDRT1-204ENST00000395906 UBE2BP63146 152 aa6.82□□□□□ -1.32
CDRT1-204ENST00000395906 LINC00242Q5T6M2 205 aa6.82□□□□□ -1.32
CDRT1-204ENST00000395906 Q6ZQT0 140 aa6.82□□□□□ -1.32
CDRT1-204ENST00000395906 LINC00467Q9BRT7 94 aa6.82□□□□□ -1.32
CDRT1-204ENST00000395906 DPM3Q9P2X0 92 aa6.82□□□□□ -1.32
CDRT1-204ENST00000395906 C19orf54Q5BKX5 351 aa6.81□□□□□ -1.32
CDRT1-204ENST00000395906 FAM19A3Q7Z5A8 133 aa6.81□□□□□ -1.32
CDRT1-204ENST00000395906 LOC110117498A0A087WWA1 95 aa6.81□□□□□ -1.32
CDRT1-204ENST00000395906 BPY2O14599 106 aa6.81□□□□□ -1.32
CDRT1-204ENST00000395906 PSPHP1O15172 72 aa6.81□□□□□ -1.32
CDRT1-204ENST00000395906 BRD3OSQ6XYD6 125 aa6.81□□□□□ -1.32
CDRT1-204ENST00000395906 NDUFS5O43920 106 aa6.8□□□□□ -1.32
CDRT1-204ENST00000395906 IGHV7-81A0A0B4J1V7 117 aa6.8□□□□□ -1.32
CDRT1-204ENST00000395906 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
CDRT1-204ENST00000395906 TRBV10-1A0A0K0K1A3 114 aa6.8□□□□□ -1.32
CDRT1-204ENST00000395906 DGAT2L7PQ6IED9 249 aa6.8□□□□□ -1.32
CDRT1-204ENST00000395906 Q8N814 137 aa6.8□□□□□ -1.32
CDRT1-204ENST00000395906 IGHV3OR16-12A0A075B7B8 117 aa6.79□□□□□ -1.32
CDRT1-204ENST00000395906 K7EQG2 157 aa6.79□□□□□ -1.32
CDRT1-204ENST00000395906 LY6G6DO95868 133 aa6.79□□□□□ -1.32
CDRT1-204ENST00000395906 ANK3Q12955 4377 aaKnown RBP6.79□□□□□ -1.32
CDRT1-204ENST00000395906 CCL18P55774 89 aa6.78□□□□□ -1.32
CDRT1-204ENST00000395906 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
CDRT1-204ENST00000395906 FN1P02751 2386 aaKnown RBP6.78□□□□□ -1.32
CDRT1-204ENST00000395906 HIVEP2P31629 2446 aa6.77□□□□□ -1.33
CDRT1-204ENST00000395906 LRCOL1A6NCL2 159 aa6.77□□□□□ -1.33
CDRT1-204ENST00000395906 IGHV4-38-2P0DP08 117 aa6.77□□□□□ -1.33
CDRT1-204ENST00000395906 ECSCRQ19T08 205 aa6.77□□□□□ -1.33
CDRT1-204ENST00000395906 LINC00158P58513 81 aa6.76□□□□□ -1.33
CDRT1-204ENST00000395906 CR1P17927 2039 aa6.76□□□□□ -1.33
CDRT1-204ENST00000395906 TRBV6-4A0A1B0GX49 114 aa6.76□□□□□ -1.33
CDRT1-204ENST00000395906 ODF3BA8MYP8 253 aa6.76□□□□□ -1.33
CDRT1-204ENST00000395906 C1orf64Q8NEQ6 169 aa6.76□□□□□ -1.33
CDRT1-204ENST00000395906 IGHV3-73A0A0B4J1V6 119 aa6.75□□□□□ -1.33
CDRT1-204ENST00000395906 MINOS1Q5TGZ0 78 aa6.75□□□□□ -1.33
CDRT1-204ENST00000395906 OCR1Q9BZK8 76 aa6.75□□□□□ -1.33
CDRT1-204ENST00000395906 WNK1Q9H4A3 2382 aa6.75□□□□□ -1.33
CDRT1-204ENST00000395906 PDE6GP18545 87 aa6.75□□□□□ -1.33
CDRT1-204ENST00000395906 PROK1P58294 105 aa6.75□□□□□ -1.33
CDRT1-204ENST00000395906 DEFB113Q30KQ7 82 aa6.75□□□□□ -1.33
CDRT1-204ENST00000395906 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
CDRT1-204ENST00000395906 NSD1Q96L73 2696 aaPredicted RBP6.74□□□□□ -1.33
CDRT1-204ENST00000395906 H3BS24 57 aa6.74□□□□□ -1.33
CDRT1-204ENST00000395906 RNASE1P07998 156 aaKnown RBP6.74□□□□□ -1.33
CDRT1-204ENST00000395906 NTM-AS1Q6ZSK4 140 aa6.74□□□□□ -1.33
CDRT1-204ENST00000395906 LINC01356Q8N9X3 169 aa6.74□□□□□ -1.33
CDRT1-204ENST00000395906 M0R2N4 97 aa6.74□□□□□ -1.33
CDRT1-204ENST00000395906 ZNF73O43830 326 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms