RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 UQCC3Q6UW78 93 aa5.37□□□□□ -1.55
ATG4A-205ENST00000394892 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-205ENST00000394892 TOMM6Q96B49 74 aa5.37□□□□□ -1.55
ATG4A-205ENST00000394892 ALKBH7Q9BT30 221 aaPredicted RBP5.37□□□□□ -1.55
ATG4A-205ENST00000394892 CTDSP1Q9GZU7 261 aa5.37□□□□□ -1.55
ATG4A-205ENST00000394892 VCX2Q9H322 139 aa5.37□□□□□ -1.55
ATG4A-205ENST00000394892 NXT2Q9NPJ8 142 aaKnown RBP5.37□□□□□ -1.55
ATG4A-205ENST00000394892 CDKN2A-AS1Q9UH64 79 aa5.37□□□□□ -1.55
ATG4A-205ENST00000394892 LPAP08519 4548 aa5.36□□□□□ -1.55
ATG4A-205ENST00000394892 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
ATG4A-205ENST00000394892 MT-ND6P03923 174 aa5.36□□□□□ -1.55
ATG4A-205ENST00000394892 IGLV7-43P04211 117 aa5.36□□□□□ -1.55
ATG4A-205ENST00000394892 NPSP0C0P6 89 aa5.36□□□□□ -1.55
ATG4A-205ENST00000394892 TIMM17AQ99595 171 aa5.36□□□□□ -1.55
ATG4A-205ENST00000394892 SEC11CQ9BY50 192 aa5.36□□□□□ -1.55
ATG4A-205ENST00000394892 NDUFC2-KCTD14E9PQ53 114 aa5.35□□□□□ -1.55
ATG4A-205ENST00000394892 K7EMI3 77 aa5.35□□□□□ -1.55
ATG4A-205ENST00000394892 KRTAP1-4P0C5Y4 121 aa5.35□□□□□ -1.55
ATG4A-205ENST00000394892 Q6ZN92 141 aa5.35□□□□□ -1.55
ATG4A-205ENST00000394892 URB1-AS1Q96HZ7 61 aa5.35□□□□□ -1.55
ATG4A-205ENST00000394892 GNB1LQ9BYB4 327 aa5.35□□□□□ -1.55
ATG4A-205ENST00000394892 RNF213Q63HN8 5207 aa5.35□□□□□ -1.55
ATG4A-205ENST00000394892 TRAV9-1A0A075B6T8 112 aa5.34□□□□□ -1.55
ATG4A-205ENST00000394892 A0A096LNJ9 63 aa5.34□□□□□ -1.55
ATG4A-205ENST00000394892 SMIM1B2RUZ4 78 aa5.34□□□□□ -1.55
ATG4A-205ENST00000394892 M0QXV9 152 aa5.34□□□□□ -1.55
ATG4A-205ENST00000394892 ERASQ7Z444 233 aa5.34□□□□□ -1.55
ATG4A-205ENST00000394892 COMMD7Q86VX2 200 aa5.34□□□□□ -1.55
ATG4A-205ENST00000394892 Q8IZM0 81 aa5.34□□□□□ -1.55
ATG4A-205ENST00000394892 C2orf88Q9BSF0 95 aa5.34□□□□□ -1.55
ATG4A-205ENST00000394892 TOMM7Q9P0U1 55 aa5.34□□□□□ -1.55
ATG4A-205ENST00000394892 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
ATG4A-205ENST00000394892 PRR26Q8N8Z3 221 aa5.33□□□□□ -1.56
ATG4A-205ENST00000394892 SCGB3A1Q96QR1 104 aa5.33□□□□□ -1.56
ATG4A-205ENST00000394892 CST9LQ9H4G1 147 aa5.33□□□□□ -1.56
ATG4A-205ENST00000394892 XAGE1AQ9HD64 81 aa5.33□□□□□ -1.56
ATG4A-205ENST00000394892 CARHSP1Q9Y2V2 147 aaKnown RBP5.33□□□□□ -1.56
ATG4A-205ENST00000394892 H0Y9J4 135 aa5.32□□□□□ -1.56
ATG4A-205ENST00000394892 HERVK_113P63121 156 aa5.32□□□□□ -1.56
ATG4A-205ENST00000394892 C6orf226Q5I0X4 101 aa5.32□□□□□ -1.56
ATG4A-205ENST00000394892 PACRGQ96M98 296 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-205ENST00000394892 C22orf24Q9Y442 160 aa5.32□□□□□ -1.56
ATG4A-205ENST00000394892 TINCRA0A1B0GVN0 87 aa5.31□□□□□ -1.56
ATG4A-205ENST00000394892 MRPL18Q9H0U6 180 aaKnown RBP5.31□□□□□ -1.56
ATG4A-205ENST00000394892 A0A0U1RQV1 116 aa5.3□□□□□ -1.56
ATG4A-205ENST00000394892 F8VRH5 84 aa5.3□□□□□ -1.56
ATG4A-205ENST00000394892 SPINK8P0C7L1 97 aa5.3□□□□□ -1.56
ATG4A-205ENST00000394892 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
ATG4A-205ENST00000394892 DIRC1Q969H9 104 aa5.3□□□□□ -1.56
ATG4A-205ENST00000394892 GEMIN7Q9H840 131 aaKnown RBP5.3□□□□□ -1.56
ATG4A-205ENST00000394892 PRSS2P07478 247 aa5.29□□□□□ -1.56
ATG4A-205ENST00000394892 CKS1BP61024 79 aa5.29□□□□□ -1.56
ATG4A-205ENST00000394892 PDZD11Q5EBL8 140 aa5.29□□□□□ -1.56
ATG4A-205ENST00000394892 PAPPA-AS1Q5QFB9 102 aa5.29□□□□□ -1.56
ATG4A-205ENST00000394892 C18orf32Q8TCD1 76 aa5.29□□□□□ -1.56
ATG4A-205ENST00000394892 COX7B2Q8TF08 81 aa5.29□□□□□ -1.56
ATG4A-205ENST00000394892 YPEL4Q96NS1 127 aa5.29□□□□□ -1.56
ATG4A-205ENST00000394892 RPS10P5Q9NQ39 176 aa5.29□□□□□ -1.56
ATG4A-205ENST00000394892 IGLV5-39A0A0G2JS06 123 aa5.28□□□□□ -1.56
ATG4A-205ENST00000394892 S100PP25815 95 aa5.28□□□□□ -1.56
ATG4A-205ENST00000394892 UBE2BP63146 152 aa5.28□□□□□ -1.56
ATG4A-205ENST00000394892 SEC11AP67812 179 aa5.28□□□□□ -1.56
ATG4A-205ENST00000394892 PMVKQ15126 192 aa5.28□□□□□ -1.56
ATG4A-205ENST00000394892 RHEBQ15382 184 aa5.28□□□□□ -1.56
ATG4A-205ENST00000394892 PMCHL1Q16048 86 aa5.28□□□□□ -1.56
ATG4A-205ENST00000394892 Q8NDZ9 215 aa5.28□□□□□ -1.56
ATG4A-205ENST00000394892 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
ATG4A-205ENST00000394892 ZNF861PO60384 105 aa5.27□□□□□ -1.57
ATG4A-205ENST00000394892 SCO1O75880 301 aa5.27□□□□□ -1.57
ATG4A-205ENST00000394892 IGLC3P0DOY3 106 aa5.27□□□□□ -1.57
ATG4A-205ENST00000394892 G0S2P27469 103 aa5.27□□□□□ -1.57
ATG4A-205ENST00000394892 FA2HQ7L5A8 372 aa5.27□□□□□ -1.57
ATG4A-205ENST00000394892 LINC00167Q96N53 147 aa5.27□□□□□ -1.57
ATG4A-205ENST00000394892 ATP6V1G1O75348 118 aa5.26□□□□□ -1.57
ATG4A-205ENST00000394892 ZNF22P17026 224 aaPredicted RBP5.26□□□□□ -1.57
ATG4A-205ENST00000394892 CXCL5P42830 114 aa5.26□□□□□ -1.57
ATG4A-205ENST00000394892 RAB5BP61020 215 aa5.26□□□□□ -1.57
ATG4A-205ENST00000394892 COX19Q49B96 90 aa5.26□□□□□ -1.57
ATG4A-205ENST00000394892 KRTAP13-1Q8IUC0 172 aa5.26□□□□□ -1.57
ATG4A-205ENST00000394892 TP73-AS1Q9UF72 201 aa5.26□□□□□ -1.57
ATG4A-205ENST00000394892 IGLV5-37A0A075B6J1 123 aa5.25□□□□□ -1.57
ATG4A-205ENST00000394892 C11orf86A6NJI1 115 aa5.25□□□□□ -1.57
ATG4A-205ENST00000394892 RPL37AP8A6NKH3 93 aa5.25□□□□□ -1.57
ATG4A-205ENST00000394892 LINC00614P0C842 121 aa5.25□□□□□ -1.57
ATG4A-205ENST00000394892 MRPL55Q7Z7F7 128 aaKnown RBP5.25□□□□□ -1.57
ATG4A-205ENST00000394892 TRAPPC1Q9Y5R8 145 aa5.25□□□□□ -1.57
ATG4A-205ENST00000394892 IGLV1-50A0A075B6I6 118 aa5.24□□□□□ -1.57
ATG4A-205ENST00000394892 A0A087X002 238 aa5.24□□□□□ -1.57
ATG4A-205ENST00000394892 GAGE10A6NGK3 116 aa5.24□□□□□ -1.57
ATG4A-205ENST00000394892 LINC01549A6NIU2 74 aa5.24□□□□□ -1.57
ATG4A-205ENST00000394892 APOC3P02656 99 aa5.24□□□□□ -1.57
ATG4A-205ENST00000394892 SMCO4Q9NRQ5 59 aa5.24□□□□□ -1.57
ATG4A-205ENST00000394892 ANAPC11Q9NYG5 84 aa5.24□□□□□ -1.57
ATG4A-205ENST00000394892 NUPR1O60356 82 aa5.23□□□□□ -1.57
ATG4A-205ENST00000394892 BCE1O60756 84 aa5.23□□□□□ -1.57
ATG4A-205ENST00000394892 HBDP02042 147 aa5.23□□□□□ -1.57
ATG4A-205ENST00000394892 PRR4Q16378 134 aa5.23□□□□□ -1.57
ATG4A-205ENST00000394892 LBHQ53QV2 105 aaPredicted RBP5.23□□□□□ -1.57
ATG4A-205ENST00000394892 CBY1Q9Y3M2 126 aa5.23□□□□□ -1.57
ATG4A-205ENST00000394892 VPREB1P12018 145 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms