RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 A0A087WZ39 114 aa11.96□□□□□ -0.49
UPK3B-203ENST00000394849 SEC11AP67812 179 aa11.96□□□□□ -0.49
UPK3B-203ENST00000394849 C2orf48Q96LS8 159 aa11.96□□□□□ -0.49
UPK3B-203ENST00000394849 IGLV7-43P04211 117 aa11.95□□□□□ -0.5
UPK3B-203ENST00000394849 H0Y9J4 135 aa11.94□□□□□ -0.5
UPK3B-203ENST00000394849 URB1-AS1Q96HZ7 61 aa11.94□□□□□ -0.5
UPK3B-203ENST00000394849 GEMIN7Q9H840 131 aaKnown RBP11.94□□□□□ -0.5
UPK3B-203ENST00000394849 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
UPK3B-203ENST00000394849 HBDP02042 147 aa11.93□□□□□ -0.5
UPK3B-203ENST00000394849 HERVK_113P63121 156 aa11.93□□□□□ -0.5
UPK3B-203ENST00000394849 PRR4Q16378 134 aa11.93□□□□□ -0.5
UPK3B-203ENST00000394849 PMCHL1Q16048 86 aa11.92□□□□□ -0.5
UPK3B-203ENST00000394849 RNF151Q2KHN1 245 aa11.92□□□□□ -0.5
UPK3B-203ENST00000394849 PHF5AQ7RTV0 110 aaKnown RBP11.92□□□□□ -0.5
UPK3B-203ENST00000394849 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
UPK3B-203ENST00000394849 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
UPK3B-203ENST00000394849 NDUFA1O15239 70 aa11.91□□□□□ -0.5
UPK3B-203ENST00000394849 RPL13AP40429 203 aaKnown RBP11.91□□□□□ -0.5
UPK3B-203ENST00000394849 RPL18AQ02543 176 aaKnown RBP11.91□□□□□ -0.5
UPK3B-203ENST00000394849 PMVKQ15126 192 aa11.91□□□□□ -0.5
UPK3B-203ENST00000394849 PACRGQ96M98 296 aaPredicted RBP11.91□□□□□ -0.5
UPK3B-203ENST00000394849 A0A096LNJ9 63 aa11.9□□□□□ -0.5
UPK3B-203ENST00000394849 F8WDY8 70 aa11.9□□□□□ -0.5
UPK3B-203ENST00000394849 TRGC2P03986 189 aa11.9□□□□□ -0.5
UPK3B-203ENST00000394849 NDUFA6P56556 154 aa11.89□□□□□ -0.51
UPK3B-203ENST00000394849 CST9LQ9H4G1 147 aa11.89□□□□□ -0.51
UPK3B-203ENST00000394849 PRSS2P07478 247 aa11.88□□□□□ -0.51
UPK3B-203ENST00000394849 BAGE3Q86Y29 109 aa11.88□□□□□ -0.51
UPK3B-203ENST00000394849 LINC00469Q8N7U9 141 aa11.88□□□□□ -0.51
UPK3B-203ENST00000394849 CHCHD1Q96BP2 118 aaKnown RBP11.88□□□□□ -0.51
UPK3B-203ENST00000394849 MRPL35Q9NZE8 188 aaKnown RBP11.88□□□□□ -0.51
UPK3B-203ENST00000394849 TOMM7Q9P0U1 55 aa11.88□□□□□ -0.51
UPK3B-203ENST00000394849 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
UPK3B-203ENST00000394849 TINCRA0A1B0GVN0 87 aa11.87□□□□□ -0.51
UPK3B-203ENST00000394849 ATP5LO75964 103 aa11.87□□□□□ -0.51
UPK3B-203ENST00000394849 KRTAP9-6A0A140TA67 174 aa11.86□□□□□ -0.51
UPK3B-203ENST00000394849 KIAA0087Q14695 138 aa11.86□□□□□ -0.51
UPK3B-203ENST00000394849 PDZD11Q5EBL8 140 aa11.86□□□□□ -0.51
UPK3B-203ENST00000394849 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
UPK3B-203ENST00000394849 COLCA2A8K830 154 aa11.85□□□□□ -0.51
UPK3B-203ENST00000394849 HSBP1O75506 76 aa11.84□□□□□ -0.51
UPK3B-203ENST00000394849 KRTAP1-4P0C5Y4 121 aa11.84□□□□□ -0.51
UPK3B-203ENST00000394849 C6orf226Q5I0X4 101 aa11.84□□□□□ -0.51
UPK3B-203ENST00000394849 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
UPK3B-203ENST00000394849 SCO1O75880 301 aa11.83□□□□□ -0.52
UPK3B-203ENST00000394849 CKS1BP61024 79 aa11.83□□□□□ -0.52
UPK3B-203ENST00000394849 LCE2AQ5TA79 106 aaPredicted RBP11.83□□□□□ -0.52
UPK3B-203ENST00000394849 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
UPK3B-203ENST00000394849 Q8IZM0 81 aa11.83□□□□□ -0.52
UPK3B-203ENST00000394849 C6orf48Q9UBA6 75 aa11.83□□□□□ -0.52
UPK3B-203ENST00000394849 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
UPK3B-203ENST00000394849 TRBV30A0A0K0K1B3 111 aa11.81□□□□□ -0.52
UPK3B-203ENST00000394849 H3BRM9 83 aa11.81□□□□□ -0.52
UPK3B-203ENST00000394849 SMIM1B2RUZ4 78 aa11.8□□□□□ -0.52
UPK3B-203ENST00000394849 TLX1NBP0CAT3 122 aa11.8□□□□□ -0.52
UPK3B-203ENST00000394849 SPINK8P0C7L1 97 aa11.79□□□□□ -0.52
UPK3B-203ENST00000394849 IGLC3P0DOY3 106 aa11.79□□□□□ -0.52
UPK3B-203ENST00000394849 FAM19A2Q8N3H0 131 aa11.79□□□□□ -0.52
UPK3B-203ENST00000394849 FAT4Q6V0I7 4981 aa11.78□□□□□ -0.52
UPK3B-203ENST00000394849 IFI27L1Q96BM0 104 aa11.78□□□□□ -0.52
UPK3B-203ENST00000394849 SERF1AO75920 110 aa11.77□□□□□ -0.53
UPK3B-203ENST00000394849 CXCL5P42830 114 aa11.77□□□□□ -0.53
UPK3B-203ENST00000394849 COX7B2Q8TF08 81 aa11.77□□□□□ -0.53
UPK3B-203ENST00000394849 FAM168BA1KXE4 195 aa11.76□□□□□ -0.53
UPK3B-203ENST00000394849 GAGE2EQ4V326 116 aa11.76□□□□□ -0.53
UPK3B-203ENST00000394849 KRTAP11-1Q8IUC1 163 aa11.76□□□□□ -0.53
UPK3B-203ENST00000394849 GAGE2DQ9UEU5 116 aa11.76□□□□□ -0.53
UPK3B-203ENST00000394849 CHTOPQ9Y3Y2 248 aaKnown RBP11.76□□□□□ -0.53
UPK3B-203ENST00000394849 F8VRH5 84 aa11.75□□□□□ -0.53
UPK3B-203ENST00000394849 ZNF22P17026 224 aaPredicted RBP11.75□□□□□ -0.53
UPK3B-203ENST00000394849 UBE2BP63146 152 aa11.75□□□□□ -0.53
UPK3B-203ENST00000394849 FAM19A5Q7Z5A7 132 aaPredicted RBP11.75□□□□□ -0.53
UPK3B-203ENST00000394849 NDUFC2-KCTD14E9PQ53 114 aa11.74□□□□□ -0.53
UPK3B-203ENST00000394849 TMEM170BQ5T4T1 132 aa11.74□□□□□ -0.53
UPK3B-203ENST00000394849 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
UPK3B-203ENST00000394849 C11orf86A6NJI1 115 aa11.73□□□□□ -0.53
UPK3B-203ENST00000394849 LEPROTL1O95214 131 aa11.73□□□□□ -0.53
UPK3B-203ENST00000394849 LINC00310P59036 64 aa11.73□□□□□ -0.53
UPK3B-203ENST00000394849 M0QXV9 152 aa11.72□□□□□ -0.53
UPK3B-203ENST00000394849 H0Y8G0 127 aa11.71□□□□□ -0.53
UPK3B-203ENST00000394849 NUPR1O60356 82 aa11.69□□□□□ -0.54
UPK3B-203ENST00000394849 ZNF861PO60384 105 aa11.69□□□□□ -0.54
UPK3B-203ENST00000394849 HSPB8Q9UJY1 196 aa11.69□□□□□ -0.54
UPK3B-203ENST00000394849 IGLV5-39A0A0G2JS06 123 aa11.68□□□□□ -0.54
UPK3B-203ENST00000394849 TSPAN13O95857 204 aa11.68□□□□□ -0.54
UPK3B-203ENST00000394849 FABP4P15090 132 aa11.68□□□□□ -0.54
UPK3B-203ENST00000394849 HIST1H2BKO60814 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST1H2BJP06899 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST1H2BOP23527 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST1H2BBP33778 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST1H2BDP58876 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST1H2BCP62807 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST2H2BEQ16778 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.67□□□□□ -0.54
UPK3B-203ENST00000394849 KRTAP7-1Q8IUC3 87 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST1H2BHQ93079 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST1H2BNQ99877 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 HIST1H2BMQ99879 126 aa11.67□□□□□ -0.54
UPK3B-203ENST00000394849 S100A1P23297 94 aa11.65□□□□□ -0.54
UPK3B-203ENST00000394849 C9orf129Q5T035 196 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms