RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
NFKB1-202ENST00000394820 MGAM2Q2M2H8 2515 aa9.43□□□□□ -0.9
NFKB1-202ENST00000394820 TEP1Q99973 2627 aaKnown RBP9.43□□□□□ -0.9
NFKB1-202ENST00000394820 ACYP1P07311 99 aa9.43□□□□□ -0.9
NFKB1-202ENST00000394820 C4orf3Q8WVX3 66 aa9.43□□□□□ -0.9
NFKB1-202ENST00000394820 CDC42SE2Q9NRR3 84 aa9.43□□□□□ -0.9
NFKB1-202ENST00000394820 NBPF19A0A087WUL8 3843 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 NTM-AS1Q6ZSK4 140 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 SBSPONQ8IVN8 264 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 C1orf158Q8N1D5 194 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 C3orf22Q8N5N4 141 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 UBL5Q9BZL1 73 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 XAGE1AQ9HD64 81 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 LINC00482Q8N8I6 264 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 CR1P17927 2039 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 HILS1P60008 231 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 DEFB105AQ8NG35 78 aa9.42□□□□□ -0.9
NFKB1-202ENST00000394820 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
NFKB1-202ENST00000394820 RPL18AQ02543 176 aaKnown RBP9.41□□□□□ -0.9
NFKB1-202ENST00000394820 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
NFKB1-202ENST00000394820 GHRHP01286 108 aa9.41□□□□□ -0.9
NFKB1-202ENST00000394820 SMCR5Q8TEV8 140 aa9.41□□□□□ -0.9
NFKB1-202ENST00000394820 UQCRQO14949 82 aa9.4□□□□□ -0.91
NFKB1-202ENST00000394820 LINC00846Q9NV44 126 aa9.4□□□□□ -0.91
NFKB1-202ENST00000394820 C6orf99Q4VX62 202 aa9.39□□□□□ -0.91
NFKB1-202ENST00000394820 ATOX1O00244 68 aa9.38□□□□□ -0.91
NFKB1-202ENST00000394820 NOTCH1P46531 2555 aa9.38□□□□□ -0.91
NFKB1-202ENST00000394820 KLK12Q9UKR0 248 aa9.38□□□□□ -0.91
NFKB1-202ENST00000394820 USP17L23D6RBM5 183 aa9.37□□□□□ -0.91
NFKB1-202ENST00000394820 FSHBP01225 129 aa9.37□□□□□ -0.91
NFKB1-202ENST00000394820 H0YGX0 51 aa9.37□□□□□ -0.91
NFKB1-202ENST00000394820 SNURFQ9Y675 71 aa9.37□□□□□ -0.91
NFKB1-202ENST00000394820 C9orf129Q5T035 196 aaKnown RBP9.37□□□□□ -0.91
NFKB1-202ENST00000394820 FAM19A1Q7Z5A9 133 aa9.37□□□□□ -0.91
NFKB1-202ENST00000394820 LINC01006Q8NI28 216 aa9.36□□□□□ -0.91
NFKB1-202ENST00000394820 ZNF469Q96JG9 3925 aaPredicted RBP9.36□□□□□ -0.91
NFKB1-202ENST00000394820 TRBV6-8A0A0A6YYG3 113 aa9.36□□□□□ -0.91
NFKB1-202ENST00000394820 KIR2DL5BQ8NHK3 375 aa9.36□□□□□ -0.91
NFKB1-202ENST00000394820 Q8N3U1 123 aa9.35□□□□□ -0.91
NFKB1-202ENST00000394820 TENM4Q6N022 2769 aa9.35□□□□□ -0.91
NFKB1-202ENST00000394820 J3KT08 172 aa9.35□□□□□ -0.91
NFKB1-202ENST00000394820 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
NFKB1-202ENST00000394820 OVOL2Q9BRP0 275 aa9.35□□□□□ -0.91
NFKB1-202ENST00000394820 TRBV10-1A0A0K0K1A3 114 aa9.35□□□□□ -0.91
NFKB1-202ENST00000394820 HIGD2BQ4VC39 106 aa9.35□□□□□ -0.91
NFKB1-202ENST00000394820 LRRC75A-AS1Q8N1F1 130 aa9.34□□□□□ -0.91
NFKB1-202ENST00000394820 COX7CP15954 63 aa9.33□□□□□ -0.92
NFKB1-202ENST00000394820 Q6Q795 121 aa9.33□□□□□ -0.92
NFKB1-202ENST00000394820 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
NFKB1-202ENST00000394820 C16orf74Q96GX8 76 aa9.33□□□□□ -0.92
NFKB1-202ENST00000394820 HIVEP1P15822 2718 aa9.33□□□□□ -0.92
NFKB1-202ENST00000394820 MAST4O15021 2626 aa9.33□□□□□ -0.92
NFKB1-202ENST00000394820 TIMM17BO60830 172 aa9.33□□□□□ -0.92
NFKB1-202ENST00000394820 J3QKU1 62 aa9.33□□□□□ -0.92
NFKB1-202ENST00000394820 RBM3P98179 157 aaKnown RBP9.33□□□□□ -0.92
NFKB1-202ENST00000394820 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
NFKB1-202ENST00000394820 LINC00959A0A1B0GUT2 108 aa9.32□□□□□ -0.92
NFKB1-202ENST00000394820 HRCT1Q6UXD1 115 aa9.32□□□□□ -0.92
NFKB1-202ENST00000394820 FAM19A5Q7Z5A7 132 aaPredicted RBP9.32□□□□□ -0.92
NFKB1-202ENST00000394820 UPK3BQ9BT76 320 aa9.32□□□□□ -0.92
NFKB1-202ENST00000394820 BAHCC1Q9P281 2608 aa9.31□□□□□ -0.92
NFKB1-202ENST00000394820 AKAP9Q99996 3911 aa9.31□□□□□ -0.92
NFKB1-202ENST00000394820 C6orf223Q8N319 242 aa9.3□□□□□ -0.92
NFKB1-202ENST00000394820 SPAG11BQ08648 103 aa9.3□□□□□ -0.92
NFKB1-202ENST00000394820 CHCHD10Q8WYQ3 142 aaPredicted RBP9.3□□□□□ -0.92
NFKB1-202ENST00000394820 FAM240AA0A1B0GVK7 77 aa9.3□□□□□ -0.92
NFKB1-202ENST00000394820 ZNF561-AS1K7EIQ3 104 aa9.3□□□□□ -0.92
NFKB1-202ENST00000394820 Q6ZQY7 126 aa9.29□□□□□ -0.92
NFKB1-202ENST00000394820 FAM104AQ969W3 186 aa9.29□□□□□ -0.92
NFKB1-202ENST00000394820 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
NFKB1-202ENST00000394820 IGKV2-28A0A075B6P5 120 aa9.28□□□□□ -0.92
NFKB1-202ENST00000394820 IGKV2D-28P01615 120 aa9.28□□□□□ -0.92
NFKB1-202ENST00000394820 IGLV5-39A0A0G2JS06 123 aa9.28□□□□□ -0.92
NFKB1-202ENST00000394820 IBA57-AS1B1ANH7 110 aa9.28□□□□□ -0.92
NFKB1-202ENST00000394820 COL6A5A8TX70 2615 aa9.27□□□□□ -0.92
NFKB1-202ENST00000394820 REG3AQ06141 175 aa9.27□□□□□ -0.92
NFKB1-202ENST00000394820 RPL28P46779 137 aaKnown RBP9.27□□□□□ -0.93
NFKB1-202ENST00000394820 FAM110AQ9BQ89 295 aa9.27□□□□□ -0.93
NFKB1-202ENST00000394820 PDZD2O15018 2839 aa9.27□□□□□ -0.93
NFKB1-202ENST00000394820 VWFP04275 2813 aa9.27□□□□□ -0.93
NFKB1-202ENST00000394820 SVIPQ8NHG7 77 aa9.26□□□□□ -0.93
NFKB1-202ENST00000394820 MRAPQ8TCY5 172 aa9.26□□□□□ -0.93
NFKB1-202ENST00000394820 SERP2Q8N6R1 65 aa9.26□□□□□ -0.93
NFKB1-202ENST00000394820 TRBV7-7A0A0K0K1E9 115 aa9.26□□□□□ -0.93
NFKB1-202ENST00000394820 BEAN1Q3B7T3 259 aa9.25□□□□□ -0.93
NFKB1-202ENST00000394820 C1orf43Q9BWL3 253 aa9.25□□□□□ -0.93
NFKB1-202ENST00000394820 TMEM256-PLSCR3K7ERE1 68 aa9.25□□□□□ -0.93
NFKB1-202ENST00000394820 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
NFKB1-202ENST00000394820 PRO0255Q9UI72 69 aa9.25□□□□□ -0.93
NFKB1-202ENST00000394820 MPLKIPQ8TAP9 179 aa9.24□□□□□ -0.93
NFKB1-202ENST00000394820 C3orf84H3BNL1 204 aa9.24□□□□□ -0.93
NFKB1-202ENST00000394820 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
NFKB1-202ENST00000394820 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
NFKB1-202ENST00000394820 Q8N9L7 120 aa9.23□□□□□ -0.93
NFKB1-202ENST00000394820 INAFM1C9JVW0 142 aa9.23□□□□□ -0.93
NFKB1-202ENST00000394820 IGKV2D-24A0A075B6R9 120 aa9.23□□□□□ -0.93
NFKB1-202ENST00000394820 JMJD7-PLA2G4BH0Y9G9 81 aa9.23□□□□□ -0.93
NFKB1-202ENST00000394820 IGHV3OR16-9A0A0B4J2B5 98 aa9.22□□□□□ -0.93
NFKB1-202ENST00000394820 FHL2Q14192 279 aa9.22□□□□□ -0.93
NFKB1-202ENST00000394820 A0A0U1RQV1 116 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms