RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 LINC00269Q8N2A0 174 aa11.36□□□□□ -0.59
PDZD4-202ENST00000393758 MXRA5Q9NR99 2828 aa11.36□□□□□ -0.59
PDZD4-202ENST00000393758 TRAV25A0A0B4J276 109 aa11.36□□□□□ -0.59
PDZD4-202ENST00000393758 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
PDZD4-202ENST00000393758 CSDC2Q9Y534 153 aaKnown RBP11.35□□□□□ -0.59
PDZD4-202ENST00000393758 LINC00959A0A1B0GUT2 108 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 FAM110AQ9BQ89 295 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 ITPR3Q14573 2671 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 IGKV2-28A0A075B6P5 120 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 IGKV2D-28P01615 120 aa11.35□□□□□ -0.59
PDZD4-202ENST00000393758 C9orf129Q5T035 196 aaKnown RBP11.35□□□□□ -0.59
PDZD4-202ENST00000393758 TRBV6-4A0A1B0GX49 114 aa11.34□□□□□ -0.59
PDZD4-202ENST00000393758 CMC4P56277 68 aaPredicted RBP11.34□□□□□ -0.59
PDZD4-202ENST00000393758 FAM222AQ5U5X8 452 aa11.34□□□□□ -0.59
PDZD4-202ENST00000393758 USP17L23D6RBM5 183 aa11.33□□□□□ -0.59
PDZD4-202ENST00000393758 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
PDZD4-202ENST00000393758 ENHOQ6UWT2 76 aa11.33□□□□□ -0.6
PDZD4-202ENST00000393758 J3KT08 172 aa11.33□□□□□ -0.6
PDZD4-202ENST00000393758 RPL18AQ02543 176 aaKnown RBP11.33□□□□□ -0.6
PDZD4-202ENST00000393758 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
PDZD4-202ENST00000393758 GHRHP01286 108 aa11.32□□□□□ -0.6
PDZD4-202ENST00000393758 BBC3Q96PG8 261 aaPredicted RBP11.31□□□□□ -0.6
PDZD4-202ENST00000393758 A8MTW9 85 aa11.31□□□□□ -0.6
PDZD4-202ENST00000393758 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
PDZD4-202ENST00000393758 HILS1P60008 231 aa11.3□□□□□ -0.6
PDZD4-202ENST00000393758 DSCR8Q96T75 97 aa11.3□□□□□ -0.6
PDZD4-202ENST00000393758 IGHV3OR16-9A0A0B4J2B5 98 aa11.3□□□□□ -0.6
PDZD4-202ENST00000393758 C20orf197Q8N268 126 aa11.29□□□□□ -0.6
PDZD4-202ENST00000393758 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
PDZD4-202ENST00000393758 A0A087WZ39 114 aa11.29□□□□□ -0.6
PDZD4-202ENST00000393758 LINC00482Q8N8I6 264 aa11.28□□□□□ -0.6
PDZD4-202ENST00000393758 DAD1P61803 113 aa11.28□□□□□ -0.6
PDZD4-202ENST00000393758 FHL2Q14192 279 aa11.28□□□□□ -0.6
PDZD4-202ENST00000393758 CHCHD10Q8WYQ3 142 aaPredicted RBP11.27□□□□□ -0.61
PDZD4-202ENST00000393758 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 SERP2Q8N6R1 65 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 SCXQ7RTU7 201 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 FAM19A1Q7Z5A9 133 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
PDZD4-202ENST00000393758 XAGE1AQ9HD64 81 aa11.25□□□□□ -0.61
PDZD4-202ENST00000393758 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
PDZD4-202ENST00000393758 KLK12Q9UKR0 248 aa11.25□□□□□ -0.61
PDZD4-202ENST00000393758 RBM3P98179 157 aaKnown RBP11.24□□□□□ -0.61
PDZD4-202ENST00000393758 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
PDZD4-202ENST00000393758 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
PDZD4-202ENST00000393758 REG3AQ06141 175 aa11.24□□□□□ -0.61
PDZD4-202ENST00000393758 Q6JHZ5 121 aa11.23□□□□□ -0.61
PDZD4-202ENST00000393758 Q8N3U1 123 aa11.23□□□□□ -0.61
PDZD4-202ENST00000393758 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
PDZD4-202ENST00000393758 F8P00451 2351 aa11.23□□□□□ -0.61
PDZD4-202ENST00000393758 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
PDZD4-202ENST00000393758 KIR2DL5BQ8NHK3 375 aa11.22□□□□□ -0.61
PDZD4-202ENST00000393758 CSMD2Q7Z408 3487 aa11.22□□□□□ -0.61
PDZD4-202ENST00000393758 VPS13CQ709C8 3753 aa11.21□□□□□ -0.61
PDZD4-202ENST00000393758 Q8N814 137 aa11.21□□□□□ -0.61
PDZD4-202ENST00000393758 LINC01600Q96MT4 127 aa11.21□□□□□ -0.61
PDZD4-202ENST00000393758 NIPBLQ6KC79 2804 aaeCLIP11.21□□□□□ -0.62
PDZD4-202ENST00000393758 CCKP06307 115 aa11.2□□□□□ -0.62
PDZD4-202ENST00000393758 UNQ6190/PRO20217Q6UXQ8 127 aa11.2□□□□□ -0.62
PDZD4-202ENST00000393758 C6orf223Q8N319 242 aa11.2□□□□□ -0.62
PDZD4-202ENST00000393758 Q6ZQY7 126 aa11.19□□□□□ -0.62
PDZD4-202ENST00000393758 A0A096LNT2 108 aa11.19□□□□□ -0.62
PDZD4-202ENST00000393758 SETXQ7Z333 2677 aaKnown RBP11.19□□□□□ -0.62
PDZD4-202ENST00000393758 Q8IZM0 81 aa11.18□□□□□ -0.62
PDZD4-202ENST00000393758 GIG44P09565 113 aaPredicted RBP11.17□□□□□ -0.62
PDZD4-202ENST00000393758 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
PDZD4-202ENST00000393758 HIGD2BQ4VC39 106 aa11.17□□□□□ -0.62
PDZD4-202ENST00000393758 IGLV1-51P01701 117 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 SNURFQ9Y675 71 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 HECTD1Q9ULT8 2610 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 FSHBP01225 129 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 CD164L2Q6UWJ8 174 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 DEFB105AQ8NG35 78 aa11.16□□□□□ -0.62
PDZD4-202ENST00000393758 ATRQ13535 2644 aa11.15□□□□□ -0.62
PDZD4-202ENST00000393758 LINC01561Q8N1V8 128 aa11.15□□□□□ -0.63
PDZD4-202ENST00000393758 C22orf24Q9Y442 160 aa11.15□□□□□ -0.63
PDZD4-202ENST00000393758 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
PDZD4-202ENST00000393758 CRYGAP11844 174 aa11.13□□□□□ -0.63
PDZD4-202ENST00000393758 TMEM258P61165 79 aa11.13□□□□□ -0.63
PDZD4-202ENST00000393758 CR1P17927 2039 aa11.13□□□□□ -0.63
PDZD4-202ENST00000393758 FAM19A3Q7Z5A8 133 aa11.13□□□□□ -0.63
PDZD4-202ENST00000393758 IL17DQ8TAD2 202 aa11.12□□□□□ -0.63
PDZD4-202ENST00000393758 CYSRT1A8MQ03 144 aa11.12□□□□□ -0.63
PDZD4-202ENST00000393758 CAMK2N2Q96S95 79 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 ZNF843Q8N446 348 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 HRCT1Q6UXD1 115 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 CYSTM1Q9H1C7 97 aa11.11□□□□□ -0.63
PDZD4-202ENST00000393758 C10orf25Q5T742 122 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 DIRC1Q969H9 104 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 SMR3AQ99954 134 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 UNC79Q9P2D8 2635 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 IGHV4-28A0A0C4DH34 117 aa11.1□□□□□ -0.63
PDZD4-202ENST00000393758 APCP25054 2843 aa11.09□□□□□ -0.63
PDZD4-202ENST00000393758 TRBV10-3A0A0K0K1G6 114 aa11.07□□□□□ -0.64
PDZD4-202ENST00000393758 C2orf48Q96LS8 159 aa11.07□□□□□ -0.64
PDZD4-202ENST00000393758 C5orf47Q569G3 176 aa11.06□□□□□ -0.64
PDZD4-202ENST00000393758 FAM236DA0A1B0GTK5 79 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms