RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 GAGE5Q13069 117 aa13.9□□□□□ -0.18
CSNK1D-203ENST00000392334 GAGE6Q13070 117 aa13.9□□□□□ -0.18
CSNK1D-203ENST00000392334 TTC32Q5I0X7 151 aa13.9□□□□□ -0.18
CSNK1D-203ENST00000392334 MEIG1Q5JSS6 88 aa13.9□□□□□ -0.18
CSNK1D-203ENST00000392334 KPRPQ5T749 579 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-203ENST00000392334 FAM222AQ5U5X8 452 aa13.9□□□□□ -0.18
CSNK1D-203ENST00000392334 RETNQ9HD89 108 aa13.9□□□□□ -0.18
CSNK1D-203ENST00000392334 TRACP01848 142 aa13.89□□□□□ -0.19
CSNK1D-203ENST00000392334 GAGE12JA6NER3 117 aa13.88□□□□□ -0.19
CSNK1D-203ENST00000392334 GAGE4Q13068 117 aa13.88□□□□□ -0.19
CSNK1D-203ENST00000392334 TMEM243Q9BU79 118 aa13.88□□□□□ -0.19
CSNK1D-203ENST00000392334 ACYP1P07311 99 aa13.88□□□□□ -0.19
CSNK1D-203ENST00000392334 TRGV4A0A0C4DH28 118 aa13.87□□□□□ -0.19
CSNK1D-203ENST00000392334 K7EIL1 84 aa13.87□□□□□ -0.19
CSNK1D-203ENST00000392334 LOC100131303A0A0U1RQF7 123 aa13.86□□□□□ -0.19
CSNK1D-203ENST00000392334 Q8NAQ8 132 aa13.86□□□□□ -0.19
CSNK1D-203ENST00000392334 A0A0U1RRA0 63 aa13.86□□□□□ -0.19
CSNK1D-203ENST00000392334 UBE2L6O14933 153 aa13.85□□□□□ -0.19
CSNK1D-203ENST00000392334 TRBV7-7A0A0K0K1E9 115 aa13.85□□□□□ -0.19
CSNK1D-203ENST00000392334 FHL2Q14192 279 aa13.85□□□□□ -0.19
CSNK1D-203ENST00000392334 CELA1Q9UNI1 258 aa13.85□□□□□ -0.19
CSNK1D-203ENST00000392334 TRBV6-4A0A1B0GX49 114 aa13.83□□□□□ -0.2
CSNK1D-203ENST00000392334 MIFP14174 115 aa13.83□□□□□ -0.2
CSNK1D-203ENST00000392334 TRAV13-2A0A0B4J235 113 aa13.82□□□□□ -0.2
CSNK1D-203ENST00000392334 LINC00612Q8N6U2 182 aa13.82□□□□□ -0.2
CSNK1D-203ENST00000392334 TENM3Q9P273 2699 aa13.81□□□□□ -0.2
CSNK1D-203ENST00000392334 RPL28P46779 137 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-203ENST00000392334 COX7B2Q8TF08 81 aa13.81□□□□□ -0.2
CSNK1D-203ENST00000392334 LYRM9A8MSI8 78 aa13.8□□□□□ -0.2
CSNK1D-203ENST00000392334 MRAPQ8TCY5 172 aa13.79□□□□□ -0.2
CSNK1D-203ENST00000392334 IMUPQ9GZP8 106 aa13.79□□□□□ -0.2
CSNK1D-203ENST00000392334 DAD1P61803 113 aa13.78□□□□□ -0.2
CSNK1D-203ENST00000392334 BAALC-AS2P0C853 105 aa13.78□□□□□ -0.2
CSNK1D-203ENST00000392334 SDIM1Q6ZPB5 146 aa13.77□□□□□ -0.21
CSNK1D-203ENST00000392334 FAM218AQ96MZ4 157 aa13.77□□□□□ -0.21
CSNK1D-203ENST00000392334 C22orf24Q9Y442 160 aa13.77□□□□□ -0.21
CSNK1D-203ENST00000392334 B5MCH6 92 aa13.76□□□□□ -0.21
CSNK1D-203ENST00000392334 CRPP02741 224 aa13.76□□□□□ -0.21
CSNK1D-203ENST00000392334 CCDC179H3BU77 68 aa13.76□□□□□ -0.21
CSNK1D-203ENST00000392334 SPART-AS1P0CW21 52 aa13.76□□□□□ -0.21
CSNK1D-203ENST00000392334 HTN3P15516 51 aa13.76□□□□□ -0.21
CSNK1D-203ENST00000392334 MEGF8Q7Z7M0 2845 aa13.76□□□□□ -0.21
CSNK1D-203ENST00000392334 MIR7-3HGQ8N6C7 128 aa13.75□□□□□ -0.21
CSNK1D-203ENST00000392334 IGKV2-28A0A075B6P5 120 aa13.74□□□□□ -0.21
CSNK1D-203ENST00000392334 IGHV3OR16-9A0A0B4J2B5 98 aa13.74□□□□□ -0.21
CSNK1D-203ENST00000392334 IGKV2D-28P01615 120 aa13.74□□□□□ -0.21
CSNK1D-203ENST00000392334 LINC00337Q8N6G1 96 aa13.74□□□□□ -0.21
CSNK1D-203ENST00000392334 COL7A1Q02388 2944 aa13.74□□□□□ -0.21
CSNK1D-203ENST00000392334 A0A096LPF7 62 aa13.73□□□□□ -0.21
CSNK1D-203ENST00000392334 TRBV6-8A0A0A6YYG3 113 aa13.73□□□□□ -0.21
CSNK1D-203ENST00000392334 LINC00643Q86TS7 51 aa13.73□□□□□ -0.21
CSNK1D-203ENST00000392334 SND1-IT1Q9HBX3 110 aa13.73□□□□□ -0.21
CSNK1D-203ENST00000392334 INAFM2P0DMQ5 153 aa13.73□□□□□ -0.21
CSNK1D-203ENST00000392334 GYPEP15421 78 aa13.73□□□□□ -0.21
CSNK1D-203ENST00000392334 SS18L2Q9UHA2 77 aa13.73□□□□□ -0.21
CSNK1D-203ENST00000392334 IBA57-AS1B1ANH7 110 aa13.72□□□□□ -0.21
CSNK1D-203ENST00000392334 A0A087WZ39 114 aa13.71□□□□□ -0.21
CSNK1D-203ENST00000392334 PRO0255Q9UI72 69 aa13.71□□□□□ -0.21
CSNK1D-203ENST00000392334 IGLV4-60A0A075B6I1 120 aa13.71□□□□□ -0.22
CSNK1D-203ENST00000392334 ATP5G1P05496 136 aa13.7□□□□□ -0.22
CSNK1D-203ENST00000392334 MALP21145 153 aa13.7□□□□□ -0.22
CSNK1D-203ENST00000392334 SMCR5Q8TEV8 140 aa13.7□□□□□ -0.22
CSNK1D-203ENST00000392334 PAX4O43316 350 aa13.69□□□□□ -0.22
CSNK1D-203ENST00000392334 TOMM7Q9P0U1 55 aa13.69□□□□□ -0.22
CSNK1D-203ENST00000392334 HUWE1Q7Z6Z7 4374 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-203ENST00000392334 A0A0J9YWU9 116 aa13.69□□□□□ -0.22
CSNK1D-203ENST00000392334 CCL18P55774 89 aa13.69□□□□□ -0.22
CSNK1D-203ENST00000392334 H0YGX0 51 aa13.68□□□□□ -0.22
CSNK1D-203ENST00000392334 LINC00158P58513 81 aa13.68□□□□□ -0.22
CSNK1D-203ENST00000392334 SMIM11BQ8TCY0 68 aa13.68□□□□□ -0.22
CSNK1D-203ENST00000392334 PRKDCP78527 4128 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-203ENST00000392334 CHCHD5Q9BSY4 110 aa13.67□□□□□ -0.22
CSNK1D-203ENST00000392334 DNAH9Q9NYC9 4486 aa13.66□□□□□ -0.22
CSNK1D-203ENST00000392334 TM2D3Q9BRN9 247 aa13.66□□□□□ -0.22
CSNK1D-203ENST00000392334 CXCL5P42830 114 aa13.65□□□□□ -0.22
CSNK1D-203ENST00000392334 Q9HAA7 133 aa13.65□□□□□ -0.22
CSNK1D-203ENST00000392334 IGKV3OR2-268A0A0C4DH90 116 aa13.64□□□□□ -0.23
CSNK1D-203ENST00000392334 LINC00959A0A1B0GUT2 108 aa13.64□□□□□ -0.23
CSNK1D-203ENST00000392334 Q6ZTC4 211 aa13.64□□□□□ -0.23
CSNK1D-203ENST00000392334 SVIPQ8NHG7 77 aa13.63□□□□□ -0.23
CSNK1D-203ENST00000392334 DNAL4O96015 105 aa13.63□□□□□ -0.23
CSNK1D-203ENST00000392334 OBSCN-AS1Q96MR7 158 aa13.63□□□□□ -0.23
CSNK1D-203ENST00000392334 A0A087WYN8 130 aa13.62□□□□□ -0.23
CSNK1D-203ENST00000392334 FAM236AA0A1B0GUQ0 79 aa13.62□□□□□ -0.23
CSNK1D-203ENST00000392334 FAM236BA0A1B0GV22 79 aa13.62□□□□□ -0.23
CSNK1D-203ENST00000392334 NANOS2P60321 138 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-203ENST00000392334 C5orf38Q86SI9 138 aa13.61□□□□□ -0.23
CSNK1D-203ENST00000392334 LINC01561Q8N1V8 128 aa13.61□□□□□ -0.23
CSNK1D-203ENST00000392334 C11orf68Q9H3H3 251 aaKnown RBP13.61□□□□□ -0.23
CSNK1D-203ENST00000392334 A0A1B0GUV1 79 aa13.6□□□□□ -0.23
CSNK1D-203ENST00000392334 GAGE2AQ6NT46 116 aa13.59□□□□□ -0.23
CSNK1D-203ENST00000392334 B9D2Q9BPU9 175 aa13.59□□□□□ -0.23
CSNK1D-203ENST00000392334 Q8IZM0 81 aa13.58□□□□□ -0.24
CSNK1D-203ENST00000392334 C11orf45Q8TAV5 145 aa13.58□□□□□ -0.24
CSNK1D-203ENST00000392334 PFN2P35080 140 aa13.57□□□□□ -0.24
CSNK1D-203ENST00000392334 SS18Q15532 418 aa13.57□□□□□ -0.24
CSNK1D-203ENST00000392334 C6orf226Q5I0X4 101 aa13.57□□□□□ -0.24
CSNK1D-203ENST00000392334 STAB2Q8WWQ8 2551 aa13.57□□□□□ -0.24
CSNK1D-203ENST00000392334 TMEM126AQ9H061 195 aa13.54□□□□□ -0.24
CSNK1D-203ENST00000392334 KLK5Q9Y337 293 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms