RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
IGHV4-28-201ENST00000390612 FA2HQ7L5A8 372 aa7.06□□□□□ -1.28
IGHV4-28-201ENST00000390612 Q8IZM0 81 aa7.06□□□□□ -1.28
IGHV4-28-201ENST00000390612 CST9LQ9H4G1 147 aa7.06□□□□□ -1.28
IGHV4-28-201ENST00000390612 KRTAP7-1Q8IUC3 87 aa7.05□□□□□ -1.28
IGHV4-28-201ENST00000390612 LINC00614P0C842 121 aa7.04□□□□□ -1.28
IGHV4-28-201ENST00000390612 PMVKQ15126 192 aa7.04□□□□□ -1.28
IGHV4-28-201ENST00000390612 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
IGHV4-28-201ENST00000390612 SMCO4Q9NRQ5 59 aa7.04□□□□□ -1.28
IGHV4-28-201ENST00000390612 SMIM1B2RUZ4 78 aa7.03□□□□□ -1.28
IGHV4-28-201ENST00000390612 NDUFC2-KCTD14E9PQ53 114 aa7.03□□□□□ -1.28
IGHV4-28-201ENST00000390612 C6orf226Q5I0X4 101 aa7.03□□□□□ -1.28
IGHV4-28-201ENST00000390612 FAM168BA1KXE4 195 aa7.02□□□□□ -1.29
IGHV4-28-201ENST00000390612 PRSS2P07478 247 aa7.02□□□□□ -1.29
IGHV4-28-201ENST00000390612 PDZD11Q5EBL8 140 aa7.02□□□□□ -1.29
IGHV4-28-201ENST00000390612 C9orf129Q5T035 196 aaKnown RBP7.02□□□□□ -1.29
IGHV4-28-201ENST00000390612 PHF5AQ7RTV0 110 aaKnown RBP7.02□□□□□ -1.29
IGHV4-28-201ENST00000390612 LINC00469Q8N7U9 141 aa7.02□□□□□ -1.29
IGHV4-28-201ENST00000390612 PACRGQ96M98 296 aaPredicted RBP7.02□□□□□ -1.29
IGHV4-28-201ENST00000390612 TOMM7Q9P0U1 55 aa7.02□□□□□ -1.29
IGHV4-28-201ENST00000390612 HMCN2Q8NDA2 5059 aa7.02□□□□□ -1.29
IGHV4-28-201ENST00000390612 IGLC3P0DOY3 106 aa7.01□□□□□ -1.29
IGHV4-28-201ENST00000390612 ODF1Q14990 250 aa7.01□□□□□ -1.29
IGHV4-28-201ENST00000390612 GAGE2EQ4V326 116 aa7.01□□□□□ -1.29
IGHV4-28-201ENST00000390612 SPINK6Q6UWN8 80 aa7.01□□□□□ -1.29
IGHV4-28-201ENST00000390612 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
IGHV4-28-201ENST00000390612 GAGE2DQ9UEU5 116 aa7.01□□□□□ -1.29
IGHV4-28-201ENST00000390612 PSORS1C2Q9UIG4 136 aa7.01□□□□□ -1.29
IGHV4-28-201ENST00000390612 F8VRH5 84 aa7□□□□□ -1.29
IGHV4-28-201ENST00000390612 HBDP02042 147 aa7□□□□□ -1.29
IGHV4-28-201ENST00000390612 CKS1BP61024 79 aa7□□□□□ -1.29
IGHV4-28-201ENST00000390612 IGLV5-39A0A0G2JS06 123 aa6.99□□□□□ -1.29
IGHV4-28-201ENST00000390612 CXCL5P42830 114 aa6.99□□□□□ -1.29
IGHV4-28-201ENST00000390612 RAB5BP61020 215 aa6.99□□□□□ -1.29
IGHV4-28-201ENST00000390612 PMCHL1Q16048 86 aa6.99□□□□□ -1.29
IGHV4-28-201ENST00000390612 LINC01600Q96MT4 127 aa6.99□□□□□ -1.29
IGHV4-28-201ENST00000390612 SERTAD4-AS1Q5TG53 156 aa6.98□□□□□ -1.29
IGHV4-28-201ENST00000390612 CBLN2Q8IUK8 224 aa6.98□□□□□ -1.29
IGHV4-28-201ENST00000390612 COX7B2Q8TF08 81 aa6.98□□□□□ -1.29
IGHV4-28-201ENST00000390612 ATP5LO75964 103 aa6.97□□□□□ -1.29
IGHV4-28-201ENST00000390612 SPINK8P0C7L1 97 aa6.97□□□□□ -1.29
IGHV4-28-201ENST00000390612 ZNF22P17026 224 aaPredicted RBP6.97□□□□□ -1.29
IGHV4-28-201ENST00000390612 KRTAP10-8P60410 259 aa6.97□□□□□ -1.29
IGHV4-28-201ENST00000390612 FAM19A5Q7Z5A7 132 aaPredicted RBP6.97□□□□□ -1.29
IGHV4-28-201ENST00000390612 CHCHD1Q96BP2 118 aaKnown RBP6.97□□□□□ -1.29
IGHV4-28-201ENST00000390612 H3BRM9 83 aa6.96□□□□□ -1.3
IGHV4-28-201ENST00000390612 M0QXV9 152 aa6.95□□□□□ -1.3
IGHV4-28-201ENST00000390612 IGLV7-43P04211 117 aa6.95□□□□□ -1.3
IGHV4-28-201ENST00000390612 C1orf137Q5JT78 98 aa6.95□□□□□ -1.3
IGHV4-28-201ENST00000390612 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
IGHV4-28-201ENST00000390612 NDUFA6P56556 154 aa6.94□□□□□ -1.3
IGHV4-28-201ENST00000390612 REG3GQ6UW15 175 aa6.94□□□□□ -1.3
IGHV4-28-201ENST00000390612 BAGE3Q86Y29 109 aa6.94□□□□□ -1.3
IGHV4-28-201ENST00000390612 XAGE1AQ9HD64 81 aa6.94□□□□□ -1.3
IGHV4-28-201ENST00000390612 TP73-AS1Q9UF72 201 aa6.94□□□□□ -1.3
IGHV4-28-201ENST00000390612 C22orf24Q9Y442 160 aa6.94□□□□□ -1.3
IGHV4-28-201ENST00000390612 TRAV12-1A0A0B4J245 112 aa6.93□□□□□ -1.3
IGHV4-28-201ENST00000390612 COLCA2A8K830 154 aa6.93□□□□□ -1.3
IGHV4-28-201ENST00000390612 TRGC2P03986 189 aa6.93□□□□□ -1.3
IGHV4-28-201ENST00000390612 LINC00310P59036 64 aa6.93□□□□□ -1.3
IGHV4-28-201ENST00000390612 PLA2G2DQ9UNK4 145 aa6.93□□□□□ -1.3
IGHV4-28-201ENST00000390612 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
IGHV4-28-201ENST00000390612 IGLV5-37A0A075B6J1 123 aa6.91□□□□□ -1.3
IGHV4-28-201ENST00000390612 CHTOPQ9Y3Y2 248 aaKnown RBP6.91□□□□□ -1.3
IGHV4-28-201ENST00000390612 UBE2BP63146 152 aa6.9□□□□□ -1.3
IGHV4-28-201ENST00000390612 LBHQ53QV2 105 aaPredicted RBP6.9□□□□□ -1.3
IGHV4-28-201ENST00000390612 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.3
IGHV4-28-201ENST00000390612 DIRC1Q969H9 104 aa6.9□□□□□ -1.3
IGHV4-28-201ENST00000390612 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.3
IGHV4-28-201ENST00000390612 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
IGHV4-28-201ENST00000390612 H0Y9J4 135 aa6.89□□□□□ -1.31
IGHV4-28-201ENST00000390612 HSBP1O75506 76 aa6.89□□□□□ -1.31
IGHV4-28-201ENST00000390612 TMEM170BQ5T4T1 132 aa6.89□□□□□ -1.31
IGHV4-28-201ENST00000390612 MRPL55Q7Z7F7 128 aaKnown RBP6.89□□□□□ -1.31
IGHV4-28-201ENST00000390612 NUPR1O60356 82 aa6.88□□□□□ -1.31
IGHV4-28-201ENST00000390612 SERF1AO75920 110 aa6.88□□□□□ -1.31
IGHV4-28-201ENST00000390612 COX17Q14061 63 aa6.88□□□□□ -1.31
IGHV4-28-201ENST00000390612 KRTAP1-4P0C5Y4 121 aa6.87□□□□□ -1.31
IGHV4-28-201ENST00000390612 SFTA2Q6UW10 78 aa6.87□□□□□ -1.31
IGHV4-28-201ENST00000390612 LINC00167Q96N53 147 aa6.87□□□□□ -1.31
IGHV4-28-201ENST00000390612 ERG28Q9UKR5 140 aa6.87□□□□□ -1.31
IGHV4-28-201ENST00000390612 ZNF861PO60384 105 aa6.86□□□□□ -1.31
IGHV4-28-201ENST00000390612 PFN2P35080 140 aa6.86□□□□□ -1.31
IGHV4-28-201ENST00000390612 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
IGHV4-28-201ENST00000390612 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
IGHV4-28-201ENST00000390612 LRP2P98164 4655 aa6.85□□□□□ -1.31
IGHV4-28-201ENST00000390612 VPREB1P12018 145 aa6.85□□□□□ -1.31
IGHV4-28-201ENST00000390612 BCE1O60756 84 aa6.84□□□□□ -1.31
IGHV4-28-201ENST00000390612 LEPROTL1O95214 131 aa6.84□□□□□ -1.31
IGHV4-28-201ENST00000390612 Q8NDZ9 215 aa6.84□□□□□ -1.31
IGHV4-28-201ENST00000390612 RPL37AP8A6NKH3 93 aa6.83□□□□□ -1.32
IGHV4-28-201ENST00000390612 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
IGHV4-28-201ENST00000390612 IGLV1-50A0A075B6I6 118 aa6.82□□□□□ -1.32
IGHV4-28-201ENST00000390612 SCO1O75880 301 aa6.82□□□□□ -1.32
IGHV4-28-201ENST00000390612 PRR26Q8N8Z3 221 aa6.82□□□□□ -1.32
IGHV4-28-201ENST00000390612 NKAPP1Q8N9T2 125 aa6.82□□□□□ -1.32
IGHV4-28-201ENST00000390612 HSPB8Q9UJY1 196 aa6.82□□□□□ -1.32
IGHV4-28-201ENST00000390612 GAGE10A6NGK3 116 aa6.81□□□□□ -1.32
IGHV4-28-201ENST00000390612 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
IGHV4-28-201ENST00000390612 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms