RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 LRP6O75581 1613 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 C2CD3Q4AC94 2353 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 FANCAO15360 1455 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 NLRP1Q9C000 1473 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 FBN3Q75N90 2809 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 ABCC2Q92887 1545 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 KDM5DQ9BY66 1539 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 LINC00959A0A1B0GUT2 108 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 CEBPZOSA8MTT3 80 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 I3L2K1 104 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 TP53AIP1Q9HCN2 124 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 CRIPTQ9P021 101 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 PRO0255Q9UI72 69 aa0.3□□□□□ -2.36
TRAJ3-201ENST00000390534 ERVK-7P63135 1459 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 IQSEC2Q5JU85 1478 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 APCP25054 2843 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 ANKRD36A6QL64 1941 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 FXYD6-FXYD2A0A087WZ82 144 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 TRBV7-4A0A0J9YYF1 115 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 A0A1B0GUT8 65 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 KRTAP5-9P26371 169 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 DEFB112Q30KQ8 113 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 C18orf32Q8TCD1 76 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 CNFNQ9BYD5 112 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 UBR4Q5T4S7 5183 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 UBR1Q8IWV7 1749 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 PPLO60437 1756 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 HYDINQ4G0P3 5121 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 MAGI2Q86UL8 1455 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 FRAS1Q86XX4 4008 aa0.29□□□□□ -2.36
TRAJ3-201ENST00000390534 CUX1P39880 1505 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 EPPK1P58107 5090 aaKnown RBP0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 PCLOQ9Y6V0 5065 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 TTC28Q96AY4 2481 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 LAMC1P11047 1609 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 KIF14Q15058 1648 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 BDP1A6H8Y1 2624 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 NUP188Q5SRE5 1749 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 SUPT6HQ7KZ85 1726 aaKnown RBP0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 ZNF292O60281 2723 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 TRAV21A0A0B4J279 112 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 SMIM13P0DJ93 91 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 DEFA5Q01523 94 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 PIGYQ3MUY2 71 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 DEFB121Q5J5C9 76 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 Q8IZM0 81 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 GAFA1Q96PS6 74 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 SMCO4Q9NRQ5 59 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 CACNA1EQ15878 2313 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 PTPRQQ9UMZ3 2332 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 CHD9Q3L8U1 2897 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 FBN2P35556 2912 aa0.28□□□□□ -2.36
TRAJ3-201ENST00000390534 ABCA12Q86UK0 2595 aa0.28□□□□□ -2.37
TRAJ3-201ENST00000390534 RYR2Q92736 4967 aa0.28□□□□□ -2.37
TRAJ3-201ENST00000390534 TENM1Q9UKZ4 2725 aa0.28□□□□□ -2.37
TRAJ3-201ENST00000390534 NHSL1Q5SYE7 1610 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 ZFHX4Q86UP3 3567 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 MYO3AQ8NEV4 1616 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 PTPRZ1P23471 2315 aaPredicted RBP0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 SPTBN1Q01082 2364 aaKnown RBP0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 PAPPA2Q9BXP8 1791 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 A0A087WXM4 84 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 PDCD5O14737 125 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 CFDP00746 253 aaPredicted RBP0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 KRTAP19-3Q7Z4W3 81 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 DEFB123Q8N688 67 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 WFDC9Q8NEX5 89 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 TNCP24821 2201 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 TPRP12270 2363 aaKnown RBP0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 RRBP1Q9P2E9 1410 aaKnown RBP0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 SLIT1O75093 1534 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 POLQO75417 2590 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 SAMD9Q5K651 1589 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 DIP2BQ9P265 1576 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 SHPRHQ149N8 1683 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 XRN1Q8IZH2 1706 aaKnown RBP0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 CRYBG1Q9Y4K1 1723 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 CELSR2Q9HCU4 2923 aa0.27□□□□□ -2.37
TRAJ3-201ENST00000390534 BIRC6Q9NR09 4857 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 RYR1P21817 5038 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 PKDREJQ9NTG1 2253 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 AKAP6Q13023 2319 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 HERC2O95714 4834 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 SPTBN5Q9NRC6 3674 aaKnown RBP0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 CPSF4LA6NMK7 179 aaKnown RBP0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 K7EQZ3 153 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 IFI6P09912 130 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 SPRR1BP22528 89 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 COX7BP24311 80 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 IFI27P40305 119 aaPredicted RBP0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 KRTAP21-2Q3LI59 83 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 USMG5Q96IX5 58 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 CRCT1Q9UGL9 99 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 ANK2Q01484 3957 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 ANKARQ7Z5J8 1434 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 ATP7BP35670 1465 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 KCPQ6ZWJ8 1503 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 TULP4Q9NRJ4 1543 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 DCAF1Q9Y4B6 1507 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms