RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 GTF2H5Q6ZYL4 71 aa-0.24□□□□□ -2.45
TRAJ41-201ENST00000390496 C14orf144Q96I85 54 aa-0.24□□□□□ -2.45
TRAJ41-201ENST00000390496 APLNQ9ULZ1 77 aa-0.24□□□□□ -2.45
TRAJ41-201ENST00000390496 PRKDCP78527 4128 aaKnown RBP-0.24□□□□□ -2.45
TRAJ41-201ENST00000390496 GAPVD1Q14C86 1478 aa-0.24□□□□□ -2.45
TRAJ41-201ENST00000390496 ANKRD17O75179 2603 aaKnown RBP-0.24□□□□□ -2.45
TRAJ41-201ENST00000390496 XRN1Q8IZH2 1706 aaKnown RBP-0.24□□□□□ -2.45
TRAJ41-201ENST00000390496 APC2O95996 2303 aa-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 SPTA1P02549 2419 aa-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 H3BQ15 152 aa-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 GNGT2O14610 69 aa-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 MT-ATP8P03928 68 aa-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 KRTAP6-1Q3LI64 71 aa-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 DEFB105AQ8NG35 78 aa-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 PLEKHH2Q8IVE3 1493 aa-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 EIF4G3O43432 1585 aaKnown RBP-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 HECTD4Q9Y4D8 3996 aa-0.25□□□□□ -2.45
TRAJ41-201ENST00000390496 FLNAP21333 2647 aaKnown RBP-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 KIAA0556O60303 1618 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 MAPKBP1O60336 1514 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 ZFYVE16Q7Z3T8 1539 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 NCOA3Q9Y6Q9 1424 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 SAA2P0DJI9 122 aaPredicted RBP-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 DEFB107AQ8IZN7 70 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 PRO1933Q9H354 126 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 LINC00846Q9NV44 126 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 CACFD1Q9UGQ2 172 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 TENM2Q9NT68 2774 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 CHD8Q9HCK8 2581 aa-0.26□□□□□ -2.45
TRAJ41-201ENST00000390496 KIF20BQ96Q89 1820 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 MON2Q7Z3U7 1717 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 FLNBO75369 2602 aaKnown RBP-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 DIP2CQ9Y2E4 1556 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 MRC2Q9UBG0 1479 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 A0A1B0GU69 56 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 CPSF4LA6NMK7 179 aaKnown RBP-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 LOC730098B7Z3J9 87 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 MPC2O95563 127 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 S100PP25815 95 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 S100A10P60903 97 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 KRTDAPP60985 99 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 CGREF1Q99674 301 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 LRP1BQ9NZR2 4599 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 COL14A1Q05707 1796 aaKnown RBP-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 A0A0G2JMZ2 1700 aa-0.27□□□□□ -2.45
TRAJ41-201ENST00000390496 SLIT1O75093 1534 aa-0.28□□□□□ -2.45
TRAJ41-201ENST00000390496 SSPOA2VEC9 5147 aa-0.28□□□□□ -2.45
TRAJ41-201ENST00000390496 H7BZZ5 65 aa-0.28□□□□□ -2.45
TRAJ41-201ENST00000390496 TRGV9Q99603 122 aa-0.28□□□□□ -2.45
TRAJ41-201ENST00000390496 SETXQ7Z333 2677 aaKnown RBP-0.28□□□□□ -2.45
TRAJ41-201ENST00000390496 SHPRHQ149N8 1683 aa-0.28□□□□□ -2.45
TRAJ41-201ENST00000390496 TARBP1Q13395 1621 aaKnown RBP-0.28□□□□□ -2.45
TRAJ41-201ENST00000390496 MUC2Q02817 5179 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 SVEP1Q4LDE5 3571 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 SRRM2Q9UQ35 2752 aaKnown RBP-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 TRBV25-1A0A075B6N4 114 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 TMEM218A2RU14 115 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 SYS1-DBNDD2H3BUS1 97 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 SPINK4O60575 86 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 SPRR2BP35325 72 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 LELP1Q5T871 98 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 C6orf201Q7Z4U5 140 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 PMCHL2Q9BQD1 86 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 SETBP1Q9Y6X0 1596 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 MAP1AP78559 2803 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 NRXN1Q9ULB1 1477 aa-0.29□□□□□ -2.46
TRAJ41-201ENST00000390496 CNOT1A5YKK6 2376 aaKnown RBP-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 ANKRD36BQ8N2N9 1353 aa-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 EP300Q09472 2414 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 TRAV30A0A087WSZ9 112 aa-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 KRTAP19-7Q3SYF9 63 aa-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 H1FX-AS1Q4G0G2 97 aa-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 NCMAPQ5T1S8 102 aa-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 PSENENQ9NZ42 101 aa-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 MLH3Q9UHC1 1453 aa-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 ACANP16112 2415 aa-0.3□□□□□ -2.46
TRAJ41-201ENST00000390496 PEG3Q9GZU2 1588 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 RGPD2P0DJD1 1756 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 PRDM15P57071 1507 aaPredicted RBP-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 FAM135AQ9P2D6 1515 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 H0Y9P7 68 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 M0R2T5 61 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 RBP2P50120 134 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 PMCHL1Q16048 86 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 PSMG4Q5JS54 123 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 USMG5Q96IX5 58 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 VAMP8Q9BV40 100 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 COL6A3P12111 3177 aa-0.31□□□□□ -2.46
TRAJ41-201ENST00000390496 UBR3Q6ZT12 1888 aa-0.32□□□□□ -2.46
TRAJ41-201ENST00000390496 C5P01031 1676 aa-0.32□□□□□ -2.46
TRAJ41-201ENST00000390496 NKTRP30414 1462 aaKnown RBP-0.32□□□□□ -2.46
TRAJ41-201ENST00000390496 ARMS2P0C7Q2 107 aa-0.32□□□□□ -2.46
TRAJ41-201ENST00000390496 COX8AP10176 69 aa-0.32□□□□□ -2.46
TRAJ41-201ENST00000390496 FAUP35544 74 aaKnown RBP-0.32□□□□□ -2.46
TRAJ41-201ENST00000390496 GNGT1P63211 74 aa-0.32□□□□□ -2.46
TRAJ41-201ENST00000390496 AP4S1Q9Y587 144 aa-0.32□□□□□ -2.46
TRAJ41-201ENST00000390496 AKAP12Q02952 1782 aa-0.32□□□□□ -2.46
TRAJ41-201ENST00000390496 KIAA1551Q9HCM1 1747 aa-0.33□□□□□ -2.46
TRAJ41-201ENST00000390496 CRYBG1Q9Y4K1 1723 aa-0.33□□□□□ -2.46
TRAJ41-201ENST00000390496 KNL1Q8NG31 2342 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms