RNA–Protein interactions for RNA: ENST00000390392.3

TRBV4-2-201, Transcript of T cell receptor beta variable 4-2, humanhuman

APPRIS P1 BASIC

Gene TRBV4-2, Length 455 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-2-201ENST00000390392 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
TRBV4-2-201ENST00000390392 ERASQ7Z444 233 aa8.32□□□□□ -1.08
TRBV4-2-201ENST00000390392 TOMM6Q96B49 74 aa8.32□□□□□ -1.08
TRBV4-2-201ENST00000390392 SMCO4Q9NRQ5 59 aa8.32□□□□□ -1.08
TRBV4-2-201ENST00000390392 HMCN2Q8NDA2 5059 aa8.32□□□□□ -1.08
TRBV4-2-201ENST00000390392 ALKBH7Q9BT30 221 aaPredicted RBP8.31□□□□□ -1.08
TRBV4-2-201ENST00000390392 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
TRBV4-2-201ENST00000390392 FAM168BA1KXE4 195 aa8.3□□□□□ -1.08
TRBV4-2-201ENST00000390392 CXCL5P42830 114 aa8.3□□□□□ -1.08
TRBV4-2-201ENST00000390392 C2orf82Q6UX34 121 aa8.3□□□□□ -1.08
TRBV4-2-201ENST00000390392 GNB1LQ9BYB4 327 aa8.3□□□□□ -1.08
TRBV4-2-201ENST00000390392 M0QXV9 152 aa8.29□□□□□ -1.08
TRBV4-2-201ENST00000390392 UBE2BP63146 152 aa8.29□□□□□ -1.08
TRBV4-2-201ENST00000390392 FAM19A5Q7Z5A7 132 aaPredicted RBP8.29□□□□□ -1.08
TRBV4-2-201ENST00000390392 TOMM7Q9P0U1 55 aa8.29□□□□□ -1.08
TRBV4-2-201ENST00000390392 LINC01546A6NGU7 62 aa8.28□□□□□ -1.08
TRBV4-2-201ENST00000390392 F8VRH5 84 aa8.28□□□□□ -1.08
TRBV4-2-201ENST00000390392 H0Y9J4 135 aa8.28□□□□□ -1.08
TRBV4-2-201ENST00000390392 SCO1O75880 301 aa8.28□□□□□ -1.08
TRBV4-2-201ENST00000390392 LBHQ53QV2 105 aaPredicted RBP8.28□□□□□ -1.08
TRBV4-2-201ENST00000390392 CBLN2Q8IUK8 224 aa8.28□□□□□ -1.08
TRBV4-2-201ENST00000390392 SCGB3A1Q96QR1 104 aa8.28□□□□□ -1.08
TRBV4-2-201ENST00000390392 KIAA1644Q3SXP7 199 aa8.27□□□□□ -1.09
TRBV4-2-201ENST00000390392 C9orf129Q5T035 196 aaKnown RBP8.27□□□□□ -1.09
TRBV4-2-201ENST00000390392 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
TRBV4-2-201ENST00000390392 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
TRBV4-2-201ENST00000390392 IGLV1-50A0A075B6I6 118 aa8.26□□□□□ -1.09
TRBV4-2-201ENST00000390392 TINCRA0A1B0GVN0 87 aa8.26□□□□□ -1.09
TRBV4-2-201ENST00000390392 NUPR1O60356 82 aa8.26□□□□□ -1.09
TRBV4-2-201ENST00000390392 PDZD11Q5EBL8 140 aa8.26□□□□□ -1.09
TRBV4-2-201ENST00000390392 KRTAP7-1Q8IUC3 87 aa8.26□□□□□ -1.09
TRBV4-2-201ENST00000390392 TP73-AS1Q9UF72 201 aa8.25□□□□□ -1.09
TRBV4-2-201ENST00000390392 KRTAP11-1Q8IUC1 163 aa8.24□□□□□ -1.09
TRBV4-2-201ENST00000390392 MRPL18Q9H0U6 180 aaKnown RBP8.24□□□□□ -1.09
TRBV4-2-201ENST00000390392 C22orf24Q9Y442 160 aa8.24□□□□□ -1.09
TRBV4-2-201ENST00000390392 TNXBP22105 4242 aa8.23□□□□□ -1.09
TRBV4-2-201ENST00000390392 IGLV5-45A0A087WSX0 123 aa8.23□□□□□ -1.09
TRBV4-2-201ENST00000390392 RPL13AP40429 203 aaKnown RBP8.23□□□□□ -1.09
TRBV4-2-201ENST00000390392 PMVKQ15126 192 aa8.23□□□□□ -1.09
TRBV4-2-201ENST00000390392 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
TRBV4-2-201ENST00000390392 ZNF861PO60384 105 aa8.22□□□□□ -1.09
TRBV4-2-201ENST00000390392 FA2HQ7L5A8 372 aa8.22□□□□□ -1.09
TRBV4-2-201ENST00000390392 COX7B2Q8TF08 81 aa8.22□□□□□ -1.09
TRBV4-2-201ENST00000390392 CST9LQ9H4G1 147 aa8.22□□□□□ -1.09
TRBV4-2-201ENST00000390392 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
TRBV4-2-201ENST00000390392 FABP9Q0Z7S8 132 aa8.21□□□□□ -1.1
TRBV4-2-201ENST00000390392 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
TRBV4-2-201ENST00000390392 YPEL4Q96NS1 127 aa8.21□□□□□ -1.1
TRBV4-2-201ENST00000390392 UBR4Q5T4S7 5183 aa8.2□□□□□ -1.1
TRBV4-2-201ENST00000390392 H3BRM9 83 aa8.2□□□□□ -1.1
TRBV4-2-201ENST00000390392 MRPL55Q7Z7F7 128 aaKnown RBP8.2□□□□□ -1.1
TRBV4-2-201ENST00000390392 XAGE1AQ9HD64 81 aa8.2□□□□□ -1.1
TRBV4-2-201ENST00000390392 COLCA2A8K830 154 aa8.19□□□□□ -1.1
TRBV4-2-201ENST00000390392 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
TRBV4-2-201ENST00000390392 ATP5LO75964 103 aa8.17□□□□□ -1.1
TRBV4-2-201ENST00000390392 LINC00614P0C842 121 aa8.17□□□□□ -1.1
TRBV4-2-201ENST00000390392 RPL28P46779 137 aaKnown RBP8.17□□□□□ -1.1
TRBV4-2-201ENST00000390392 BCE1O60756 84 aa8.16□□□□□ -1.1
TRBV4-2-201ENST00000390392 RAB5BP61020 215 aa8.16□□□□□ -1.1
TRBV4-2-201ENST00000390392 TRAPPC1Q9Y5R8 145 aa8.16□□□□□ -1.1
TRBV4-2-201ENST00000390392 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
TRBV4-2-201ENST00000390392 IGLC3P0DOY3 106 aa8.15□□□□□ -1.1
TRBV4-2-201ENST00000390392 COX17Q14061 63 aa8.15□□□□□ -1.1
TRBV4-2-201ENST00000390392 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
TRBV4-2-201ENST00000390392 LINC00167Q96N53 147 aa8.15□□□□□ -1.1
TRBV4-2-201ENST00000390392 SPINK8P0C7L1 97 aa8.14□□□□□ -1.11
TRBV4-2-201ENST00000390392 HBDP02042 147 aa8.13□□□□□ -1.11
TRBV4-2-201ENST00000390392 NKAPP1Q8N9T2 125 aa8.13□□□□□ -1.11
TRBV4-2-201ENST00000390392 NDUFA6P56556 154 aa8.12□□□□□ -1.11
TRBV4-2-201ENST00000390392 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
TRBV4-2-201ENST00000390392 LRP2P98164 4655 aa8.11□□□□□ -1.11
TRBV4-2-201ENST00000390392 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
TRBV4-2-201ENST00000390392 TRGC2P03986 189 aa8.11□□□□□ -1.11
TRBV4-2-201ENST00000390392 RPL24P83731 157 aaKnown RBP8.11□□□□□ -1.11
TRBV4-2-201ENST00000390392 RPL37AP8A6NKH3 93 aa8.1□□□□□ -1.11
TRBV4-2-201ENST00000390392 CRYGAP11844 174 aa8.1□□□□□ -1.11
TRBV4-2-201ENST00000390392 A0A096LNJ9 63 aa8.09□□□□□ -1.11
TRBV4-2-201ENST00000390392 ZNF22P17026 224 aaPredicted RBP8.09□□□□□ -1.11
TRBV4-2-201ENST00000390392 BAGE3Q86Y29 109 aa8.09□□□□□ -1.11
TRBV4-2-201ENST00000390392 URB1-AS1Q96HZ7 61 aa8.09□□□□□ -1.11
TRBV4-2-201ENST00000390392 PFN2P35080 140 aa8.08□□□□□ -1.12
TRBV4-2-201ENST00000390392 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
TRBV4-2-201ENST00000390392 UBE2AP49459 152 aa8.07□□□□□ -1.12
TRBV4-2-201ENST00000390392 CTAG1AP78358 180 aa8.07□□□□□ -1.12
TRBV4-2-201ENST00000390392 GAGE10A6NGK3 116 aa8.06□□□□□ -1.12
TRBV4-2-201ENST00000390392 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
TRBV4-2-201ENST00000390392 TYMSOSQ8TAI1 123 aa8.06□□□□□ -1.12
TRBV4-2-201ENST00000390392 CHCHD1Q96BP2 118 aaKnown RBP8.06□□□□□ -1.12
TRBV4-2-201ENST00000390392 SND1-IT1Q9HBX3 110 aa8.06□□□□□ -1.12
TRBV4-2-201ENST00000390392 FAM229BQ4G0N7 80 aa8.05□□□□□ -1.12
TRBV4-2-201ENST00000390392 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
TRBV4-2-201ENST00000390392 TRAV12-1A0A0B4J245 112 aa8.04□□□□□ -1.12
TRBV4-2-201ENST00000390392 VPREB1P12018 145 aa8.04□□□□□ -1.12
TRBV4-2-201ENST00000390392 PRR4Q16378 134 aa8.04□□□□□ -1.12
TRBV4-2-201ENST00000390392 CHTOPQ9Y3Y2 248 aaKnown RBP8.04□□□□□ -1.12
TRBV4-2-201ENST00000390392 C11orf86A6NJI1 115 aa8.03□□□□□ -1.12
TRBV4-2-201ENST00000390392 LINC00587B1AMM8 73 aa8.03□□□□□ -1.12
TRBV4-2-201ENST00000390392 HIST1H2BKO60814 126 aa8.03□□□□□ -1.12
TRBV4-2-201ENST00000390392 HIST1H2BJP06899 126 aa8.03□□□□□ -1.12
TRBV4-2-201ENST00000390392 HIST1H2BOP23527 126 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms