RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 STAB1Q9NY15 2570 aa13.64□□□□□ -0.23
PPFIA1-202ENST00000389547 KLLNB2CW77 178 aa13.64□□□□□ -0.23
PPFIA1-202ENST00000389547 APOC4P55056 127 aa13.64□□□□□ -0.23
PPFIA1-202ENST00000389547 CRYGAP11844 174 aa13.63□□□□□ -0.23
PPFIA1-202ENST00000389547 Q6ZTI0 123 aa13.63□□□□□ -0.23
PPFIA1-202ENST00000389547 DPH3Q96FX2 82 aa13.63□□□□□ -0.23
PPFIA1-202ENST00000389547 PYGO1Q9Y3Y4 419 aa13.63□□□□□ -0.23
PPFIA1-202ENST00000389547 TIMM17BO60830 172 aa13.63□□□□□ -0.23
PPFIA1-202ENST00000389547 COX7B2Q8TF08 81 aa13.63□□□□□ -0.23
PPFIA1-202ENST00000389547 BAHCC1Q9P281 2608 aa13.63□□□□□ -0.23
PPFIA1-202ENST00000389547 KRTAP1-3Q8IUG1 177 aa13.62□□□□□ -0.23
PPFIA1-202ENST00000389547 JMJD7-PLA2G4BH0Y9G9 81 aa13.61□□□□□ -0.23
PPFIA1-202ENST00000389547 NF1P21359 2839 aa13.61□□□□□ -0.23
PPFIA1-202ENST00000389547 Q6JHZ5 121 aa13.61□□□□□ -0.23
PPFIA1-202ENST00000389547 CLPSL2Q6UWE3 100 aa13.59□□□□□ -0.23
PPFIA1-202ENST00000389547 LINC00846Q9NV44 126 aa13.59□□□□□ -0.23
PPFIA1-202ENST00000389547 SMCR5Q8TEV8 140 aa13.59□□□□□ -0.23
PPFIA1-202ENST00000389547 MUC4Q99102 2169 aa13.59□□□□□ -0.23
PPFIA1-202ENST00000389547 AMELXQ99217 191 aa13.58□□□□□ -0.23
PPFIA1-202ENST00000389547 RPS28P62857 69 aaKnown RBP13.58□□□□□ -0.24
PPFIA1-202ENST00000389547 KIF25-AS1Q9Y6Z4 181 aa13.58□□□□□ -0.24
PPFIA1-202ENST00000389547 V9GYY9 64 aa13.58□□□□□ -0.24
PPFIA1-202ENST00000389547 Q8N2B8 174 aa13.58□□□□□ -0.24
PPFIA1-202ENST00000389547 XCL1P47992 114 aa13.58□□□□□ -0.24
PPFIA1-202ENST00000389547 UBE2D4Q9Y2X8 147 aa13.57□□□□□ -0.24
PPFIA1-202ENST00000389547 SMIM11BQ8TCY0 68 aa13.57□□□□□ -0.24
PPFIA1-202ENST00000389547 OXLD1Q5BKU9 147 aa13.57□□□□□ -0.24
PPFIA1-202ENST00000389547 C16orf74Q96GX8 76 aa13.56□□□□□ -0.24
PPFIA1-202ENST00000389547 LINC00315P59091 139 aa13.56□□□□□ -0.24
PPFIA1-202ENST00000389547 NOTCH1P46531 2555 aa13.55□□□□□ -0.24
PPFIA1-202ENST00000389547 PRB2P02812 416 aaPredicted RBP13.55□□□□□ -0.24
PPFIA1-202ENST00000389547 C9orf85Q96MD7 179 aa13.55□□□□□ -0.24
PPFIA1-202ENST00000389547 FAM222AQ5U5X8 452 aa13.54□□□□□ -0.24
PPFIA1-202ENST00000389547 SS18Q15532 418 aa13.54□□□□□ -0.24
PPFIA1-202ENST00000389547 SCXQ7RTU7 201 aa13.54□□□□□ -0.24
PPFIA1-202ENST00000389547 A0A087WYN8 130 aa13.53□□□□□ -0.24
PPFIA1-202ENST00000389547 EIF4EBP3O60516 100 aaPredicted RBP13.53□□□□□ -0.24
PPFIA1-202ENST00000389547 TMEM256-PLSCR3K7ERE1 68 aa13.53□□□□□ -0.24
PPFIA1-202ENST00000389547 FAM19A1Q7Z5A9 133 aa13.52□□□□□ -0.25
PPFIA1-202ENST00000389547 GYPEP15421 78 aa13.51□□□□□ -0.25
PPFIA1-202ENST00000389547 C16orf95Q9H693 158 aa13.51□□□□□ -0.25
PPFIA1-202ENST00000389547 IGLV1-51P01701 117 aa13.51□□□□□ -0.25
PPFIA1-202ENST00000389547 COX6A2Q02221 97 aa13.51□□□□□ -0.25
PPFIA1-202ENST00000389547 C1orf195Q5TG92 126 aa13.51□□□□□ -0.25
PPFIA1-202ENST00000389547 NDUFC2-KCTD14E9PQ53 114 aa13.5□□□□□ -0.25
PPFIA1-202ENST00000389547 CR1P17927 2039 aa13.5□□□□□ -0.25
PPFIA1-202ENST00000389547 ATP5EP2Q5VTU8 51 aa13.49□□□□□ -0.25
PPFIA1-202ENST00000389547 F8WEM9 126 aa13.49□□□□□ -0.25
PPFIA1-202ENST00000389547 K7EQD1 137 aa13.49□□□□□ -0.25
PPFIA1-202ENST00000389547 LINC00242Q5T6M2 205 aa13.49□□□□□ -0.25
PPFIA1-202ENST00000389547 FAM218AQ96MZ4 157 aa13.49□□□□□ -0.25
PPFIA1-202ENST00000389547 SMIM26A0A096LP01 95 aa13.48□□□□□ -0.25
PPFIA1-202ENST00000389547 SERP1Q9Y6X1 66 aa13.47□□□□□ -0.25
PPFIA1-202ENST00000389547 ZNF575Q86XF7 245 aa13.47□□□□□ -0.25
PPFIA1-202ENST00000389547 FAM19A4Q96LR4 140 aa13.47□□□□□ -0.25
PPFIA1-202ENST00000389547 FBN2P35556 2912 aa13.47□□□□□ -0.25
PPFIA1-202ENST00000389547 LITAFQ99732 161 aa13.46□□□□□ -0.25
PPFIA1-202ENST00000389547 PRO0628Q9UI54 55 aa13.46□□□□□ -0.25
PPFIA1-202ENST00000389547 KLK9Q2XQG4 91 aa13.46□□□□□ -0.25
PPFIA1-202ENST00000389547 NBEAL2Q6ZNJ1 2754 aa13.45□□□□□ -0.26
PPFIA1-202ENST00000389547 SMIM1B2RUZ4 78 aa13.45□□□□□ -0.26
PPFIA1-202ENST00000389547 SPART-AS1P0CW21 52 aa13.45□□□□□ -0.26
PPFIA1-202ENST00000389547 RPL28P46779 137 aaKnown RBP13.45□□□□□ -0.26
PPFIA1-202ENST00000389547 SOSTDC1Q6X4U4 206 aa13.45□□□□□ -0.26
PPFIA1-202ENST00000389547 HIVEP1P15822 2718 aa13.44□□□□□ -0.26
PPFIA1-202ENST00000389547 KRTAP1-1Q07627 177 aa13.44□□□□□ -0.26
PPFIA1-202ENST00000389547 C1orf158Q8N1D5 194 aa13.44□□□□□ -0.26
PPFIA1-202ENST00000389547 CHCHD7Q9BUK0 85 aa13.44□□□□□ -0.26
PPFIA1-202ENST00000389547 ANGP03950 147 aaKnown RBP13.43□□□□□ -0.26
PPFIA1-202ENST00000389547 CCL18P55774 89 aa13.43□□□□□ -0.26
PPFIA1-202ENST00000389547 CCKP06307 115 aa13.42□□□□□ -0.26
PPFIA1-202ENST00000389547 NBEAL1Q6ZS30 2694 aa13.42□□□□□ -0.26
PPFIA1-202ENST00000389547 IGLV10-54A0A075B6I4 117 aa13.41□□□□□ -0.26
PPFIA1-202ENST00000389547 LINC00337Q8N6G1 96 aa13.4□□□□□ -0.26
PPFIA1-202ENST00000389547 LOC100131303A0A0U1RQF7 123 aa13.4□□□□□ -0.26
PPFIA1-202ENST00000389547 RMI2Q96E14 147 aa13.39□□□□□ -0.27
PPFIA1-202ENST00000389547 Q9UF83 564 aa13.39□□□□□ -0.27
PPFIA1-202ENST00000389547 CELSR1Q9NYQ6 3014 aa13.39□□□□□ -0.27
PPFIA1-202ENST00000389547 FHL2Q14192 279 aa13.39□□□□□ -0.27
PPFIA1-202ENST00000389547 NIPBLQ6KC79 2804 aaeCLIP13.39□□□□□ -0.27
PPFIA1-202ENST00000389547 MXRA5Q9NR99 2828 aa13.38□□□□□ -0.27
PPFIA1-202ENST00000389547 C6orf99Q4VX62 202 aa13.38□□□□□ -0.27
PPFIA1-202ENST00000389547 Q6ZSN1 163 aa13.38□□□□□ -0.27
PPFIA1-202ENST00000389547 TRAV7A0A075B6U4 112 aa13.37□□□□□ -0.27
PPFIA1-202ENST00000389547 IBA57-AS1B1ANH7 110 aa13.37□□□□□ -0.27
PPFIA1-202ENST00000389547 SPENQ96T58 3664 aaKnown RBP13.36□□□□□ -0.27
PPFIA1-202ENST00000389547 IGHV4-30-4P0DP06 118 aa13.36□□□□□ -0.27
PPFIA1-202ENST00000389547 PRO0255Q9UI72 69 aa13.36□□□□□ -0.27
PPFIA1-202ENST00000389547 SVEP1Q4LDE5 3571 aa13.35□□□□□ -0.27
PPFIA1-202ENST00000389547 IGHV4-28A0A0C4DH34 117 aa13.35□□□□□ -0.27
PPFIA1-202ENST00000389547 FUSP35637 526 aaKnown RBP eCLIP13.34□□□□□ -0.27
PPFIA1-202ENST00000389547 TRBV10-1A0A0K0K1A3 114 aa13.34□□□□□ -0.27
PPFIA1-202ENST00000389547 NREPQ16612 68 aa13.33□□□□□ -0.28
PPFIA1-202ENST00000389547 LINC01561Q8N1V8 128 aa13.32□□□□□ -0.28
PPFIA1-202ENST00000389547 PRR3P79522 188 aaKnown RBP13.32□□□□□ -0.28
PPFIA1-202ENST00000389547 LRCOL1A6NCL2 159 aa13.31□□□□□ -0.28
PPFIA1-202ENST00000389547 LINC00336Q6ZUF6 198 aa13.31□□□□□ -0.28
PPFIA1-202ENST00000389547 CDC42SE2Q9NRR3 84 aa13.31□□□□□ -0.28
PPFIA1-202ENST00000389547 MIFP14174 115 aa13.31□□□□□ -0.28
PPFIA1-202ENST00000389547 NSD1Q96L73 2696 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms