RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 C2orf91Q6ZV80 131 aa9.26□□□□□ -0.93
PTPRN2-202ENST00000389416 LINC00315P59091 139 aa9.26□□□□□ -0.93
PTPRN2-202ENST00000389416 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
PTPRN2-202ENST00000389416 REV3LO60673 3130 aa9.26□□□□□ -0.93
PTPRN2-202ENST00000389416 IGKV2-28A0A075B6P5 120 aa9.26□□□□□ -0.93
PTPRN2-202ENST00000389416 SMIM1B2RUZ4 78 aa9.26□□□□□ -0.93
PTPRN2-202ENST00000389416 TCL1BO95988 128 aa9.26□□□□□ -0.93
PTPRN2-202ENST00000389416 IGKV2D-28P01615 120 aa9.26□□□□□ -0.93
PTPRN2-202ENST00000389416 C6orf99Q4VX62 202 aa9.25□□□□□ -0.93
PTPRN2-202ENST00000389416 TEN1Q86WV5 123 aa9.25□□□□□ -0.93
PTPRN2-202ENST00000389416 A0A096LNI7 61 aa9.25□□□□□ -0.93
PTPRN2-202ENST00000389416 COL12A1Q99715 3063 aa9.25□□□□□ -0.93
PTPRN2-202ENST00000389416 SBSPONQ8IVN8 264 aa9.25□□□□□ -0.93
PTPRN2-202ENST00000389416 C9orf116Q5BN46 136 aaPredicted RBP9.25□□□□□ -0.93
PTPRN2-202ENST00000389416 TRBV10-2A0A0K0K1G8 114 aa9.24□□□□□ -0.93
PTPRN2-202ENST00000389416 FAM19A1Q7Z5A9 133 aa9.24□□□□□ -0.93
PTPRN2-202ENST00000389416 Q8IZM0 81 aa9.24□□□□□ -0.93
PTPRN2-202ENST00000389416 X6R8D5 127 aa9.24□□□□□ -0.93
PTPRN2-202ENST00000389416 LRCOL1A6NCL2 159 aa9.24□□□□□ -0.93
PTPRN2-202ENST00000389416 WFDC9Q8NEX5 89 aa9.23□□□□□ -0.93
PTPRN2-202ENST00000389416 CSDC2Q9Y534 153 aaKnown RBP9.23□□□□□ -0.93
PTPRN2-202ENST00000389416 SPEGQ15772 3267 aa9.23□□□□□ -0.93
PTPRN2-202ENST00000389416 KRTAP1-1Q07627 177 aa9.23□□□□□ -0.93
PTPRN2-202ENST00000389416 AMELXQ99217 191 aa9.23□□□□□ -0.93
PTPRN2-202ENST00000389416 SLPIP03973 132 aa9.22□□□□□ -0.93
PTPRN2-202ENST00000389416 TRIAP1O43715 76 aa9.22□□□□□ -0.93
PTPRN2-202ENST00000389416 TIMM17BO60830 172 aa9.22□□□□□ -0.93
PTPRN2-202ENST00000389416 TRACP01848 142 aa9.22□□□□□ -0.93
PTPRN2-202ENST00000389416 H3BT86 120 aa9.22□□□□□ -0.93
PTPRN2-202ENST00000389416 TSPEAR-AS2P59090 65 aa9.21□□□□□ -0.94
PTPRN2-202ENST00000389416 RBM3P98179 157 aaKnown RBP9.21□□□□□ -0.94
PTPRN2-202ENST00000389416 NOTCH1P46531 2555 aa9.21□□□□□ -0.94
PTPRN2-202ENST00000389416 TMEM256-PLSCR3K7ERE1 68 aa9.2□□□□□ -0.94
PTPRN2-202ENST00000389416 NTM-AS1Q6ZSK4 140 aa9.2□□□□□ -0.94
PTPRN2-202ENST00000389416 A0A1B0GUV1 79 aa9.2□□□□□ -0.94
PTPRN2-202ENST00000389416 B9D2Q9BPU9 175 aa9.2□□□□□ -0.94
PTPRN2-202ENST00000389416 JMJD7-PLA2G4BH0Y9G9 81 aa9.2□□□□□ -0.94
PTPRN2-202ENST00000389416 ADGRG4Q8IZF6 3080 aa9.19□□□□□ -0.94
PTPRN2-202ENST00000389416 UBR5O95071 2799 aaPredicted RBP9.19□□□□□ -0.94
PTPRN2-202ENST00000389416 RPL37AP8A6NKH3 93 aa9.19□□□□□ -0.94
PTPRN2-202ENST00000389416 USP17L23D6RBM5 183 aa9.19□□□□□ -0.94
PTPRN2-202ENST00000389416 NHLRC4P0CG21 123 aaPredicted RBP9.19□□□□□ -0.94
PTPRN2-202ENST00000389416 KRTAP10-3P60369 221 aa9.19□□□□□ -0.94
PTPRN2-202ENST00000389416 C14orf132Q9NPU4 83 aa9.18□□□□□ -0.94
PTPRN2-202ENST00000389416 TACC2O95359 2948 aa9.18□□□□□ -0.94
PTPRN2-202ENST00000389416 NREPQ16612 68 aa9.17□□□□□ -0.94
PTPRN2-202ENST00000389416 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
PTPRN2-202ENST00000389416 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
PTPRN2-202ENST00000389416 C6orf223Q8N319 242 aa9.17□□□□□ -0.94
PTPRN2-202ENST00000389416 IGKV3D-7A0A0C4DH55 119 aa9.16□□□□□ -0.94
PTPRN2-202ENST00000389416 DMXL1Q9Y485 3027 aa9.16□□□□□ -0.94
PTPRN2-202ENST00000389416 ZZEF1O43149 2961 aa9.16□□□□□ -0.94
PTPRN2-202ENST00000389416 ESRGQ1W209 222 aa9.16□□□□□ -0.94
PTPRN2-202ENST00000389416 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
PTPRN2-202ENST00000389416 SPTBN5Q9NRC6 3674 aaKnown RBP9.16□□□□□ -0.94
PTPRN2-202ENST00000389416 M0R378 163 aa9.16□□□□□ -0.94
PTPRN2-202ENST00000389416 FOXI1Q12951 378 aa9.16□□□□□ -0.94
PTPRN2-202ENST00000389416 EGFEM1PQ0D2K5 195 aa9.15□□□□□ -0.94
PTPRN2-202ENST00000389416 PRR3P79522 188 aaKnown RBP9.15□□□□□ -0.94
PTPRN2-202ENST00000389416 Q8NAQ8 132 aa9.15□□□□□ -0.94
PTPRN2-202ENST00000389416 TRBV30A0A0K0K1B3 111 aa9.15□□□□□ -0.95
PTPRN2-202ENST00000389416 COX17Q14061 63 aa9.15□□□□□ -0.95
PTPRN2-202ENST00000389416 H3BQ85 93 aa9.14□□□□□ -0.95
PTPRN2-202ENST00000389416 SMIM11BQ8TCY0 68 aa9.14□□□□□ -0.95
PTPRN2-202ENST00000389416 ACYP1P07311 99 aa9.14□□□□□ -0.95
PTPRN2-202ENST00000389416 ADAMTSL4-AS1Q5T5F5 129 aa9.14□□□□□ -0.95
PTPRN2-202ENST00000389416 Q6ZQY7 126 aa9.14□□□□□ -0.95
PTPRN2-202ENST00000389416 NDUFS5O43920 106 aa9.13□□□□□ -0.95
PTPRN2-202ENST00000389416 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
PTPRN2-202ENST00000389416 NBEAQ8NFP9 2946 aa9.13□□□□□ -0.95
PTPRN2-202ENST00000389416 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
PTPRN2-202ENST00000389416 C7orf33Q8WU49 177 aa9.13□□□□□ -0.95
PTPRN2-202ENST00000389416 J3KT08 172 aa9.12□□□□□ -0.95
PTPRN2-202ENST00000389416 ZNF73O43830 326 aaPredicted RBP9.1□□□□□ -0.95
PTPRN2-202ENST00000389416 Q8N3U1 123 aa9.1□□□□□ -0.95
PTPRN2-202ENST00000389416 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
PTPRN2-202ENST00000389416 NDUFB1O75438 58 aa9.09□□□□□ -0.95
PTPRN2-202ENST00000389416 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
PTPRN2-202ENST00000389416 MDFIQ99750 246 aa9.09□□□□□ -0.95
PTPRN2-202ENST00000389416 ITPR2Q14571 2701 aa9.09□□□□□ -0.95
PTPRN2-202ENST00000389416 TRBV10-3A0A0K0K1G6 114 aa9.08□□□□□ -0.96
PTPRN2-202ENST00000389416 C19orf73Q9NVV2 129 aa9.08□□□□□ -0.96
PTPRN2-202ENST00000389416 M0QXV9 152 aa9.08□□□□□ -0.96
PTPRN2-202ENST00000389416 C1orf134Q5TEV5 83 aa9.08□□□□□ -0.96
PTPRN2-202ENST00000389416 Q6ZRU5 148 aa9.08□□□□□ -0.96
PTPRN2-202ENST00000389416 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
PTPRN2-202ENST00000389416 MUC7Q8TAX7 377 aa9.08□□□□□ -0.96
PTPRN2-202ENST00000389416 PDE6GP18545 87 aa9.07□□□□□ -0.96
PTPRN2-202ENST00000389416 FAM236AA0A1B0GUQ0 79 aa9.07□□□□□ -0.96
PTPRN2-202ENST00000389416 FAM236BA0A1B0GV22 79 aa9.07□□□□□ -0.96
PTPRN2-202ENST00000389416 NDUFC2-KCTD14E9PQ53 114 aa9.07□□□□□ -0.96
PTPRN2-202ENST00000389416 LINC01556Q5JQF7 62 aa9.07□□□□□ -0.96
PTPRN2-202ENST00000389416 SVIPQ8NHG7 77 aa9.06□□□□□ -0.96
PTPRN2-202ENST00000389416 LINC00474Q9P2X8 69 aa9.06□□□□□ -0.96
PTPRN2-202ENST00000389416 K7EIL1 84 aa9.06□□□□□ -0.96
PTPRN2-202ENST00000389416 LST1O00453 97 aa9.06□□□□□ -0.96
PTPRN2-202ENST00000389416 ITPR1Q14643 2758 aa9.06□□□□□ -0.96
PTPRN2-202ENST00000389416 IGLV5-52A0A0A0MRZ9 124 aa9.05□□□□□ -0.96
PTPRN2-202ENST00000389416 A8MTW9 85 aa9.05□□□□□ -0.96
PTPRN2-202ENST00000389416 KALRNO60229 2985 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms