RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 NDUFC2O95298 119 aa8.35□□□□□ -1.07
RAPGEF3-201ENST00000389212 CXCL5P42830 114 aa8.35□□□□□ -1.07
RAPGEF3-201ENST00000389212 NBEAL2Q6ZNJ1 2754 aa8.34□□□□□ -1.07
RAPGEF3-201ENST00000389212 LOC100131303A0A0U1RQF7 123 aa8.34□□□□□ -1.07
RAPGEF3-201ENST00000389212 TIMM17BO60830 172 aa8.34□□□□□ -1.07
RAPGEF3-201ENST00000389212 C5orf38Q86SI9 138 aa8.34□□□□□ -1.07
RAPGEF3-201ENST00000389212 INAFM2P0DMQ5 153 aa8.34□□□□□ -1.08
RAPGEF3-201ENST00000389212 PDZD2O15018 2839 aa8.33□□□□□ -1.08
RAPGEF3-201ENST00000389212 NTM-AS1Q6ZSK4 140 aa8.33□□□□□ -1.08
RAPGEF3-201ENST00000389212 LINC01006Q8NI28 216 aa8.33□□□□□ -1.08
RAPGEF3-201ENST00000389212 HIVEP2P31629 2446 aa8.33□□□□□ -1.08
RAPGEF3-201ENST00000389212 GCN1Q92616 2671 aaKnown RBP8.33□□□□□ -1.08
RAPGEF3-201ENST00000389212 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
RAPGEF3-201ENST00000389212 GIG44P09565 113 aaPredicted RBP8.32□□□□□ -1.08
RAPGEF3-201ENST00000389212 PIK3CD-AS1Q5SR53 167 aa8.31□□□□□ -1.08
RAPGEF3-201ENST00000389212 K7EQD1 137 aa8.31□□□□□ -1.08
RAPGEF3-201ENST00000389212 RPL36AP83881 106 aaKnown RBP8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 RPL36ALQ969Q0 106 aaKnown RBP8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 SMR3AQ99954 134 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 Q9H8V8 135 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 HECTD1Q9ULT8 2610 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 TRGV2A0A075B6R0 118 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 SMIM26A0A096LP01 95 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 KRTAP1-1Q07627 177 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 MIAQ16674 131 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 SERP1Q9Y6X1 66 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 ANK3Q12955 4377 aaKnown RBP8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 UNC79Q9P2D8 2635 aa8.3□□□□□ -1.08
RAPGEF3-201ENST00000389212 XCL1P47992 114 aa8.28□□□□□ -1.08
RAPGEF3-201ENST00000389212 PRIMA1Q86XR5 153 aa8.28□□□□□ -1.08
RAPGEF3-201ENST00000389212 LINC00846Q9NV44 126 aa8.28□□□□□ -1.08
RAPGEF3-201ENST00000389212 PMAIP1Q13794 54 aa8.27□□□□□ -1.09
RAPGEF3-201ENST00000389212 UPK3BQ9BT76 320 aa8.27□□□□□ -1.09
RAPGEF3-201ENST00000389212 PLAC8L1A1L4L8 177 aa8.27□□□□□ -1.09
RAPGEF3-201ENST00000389212 DEFB121Q5J5C9 76 aa8.27□□□□□ -1.09
RAPGEF3-201ENST00000389212 ENHOQ6UWT2 76 aa8.27□□□□□ -1.09
RAPGEF3-201ENST00000389212 VWFP04275 2813 aa8.27□□□□□ -1.09
RAPGEF3-201ENST00000389212 NDUFC2-KCTD14E9PQ53 114 aa8.27□□□□□ -1.09
RAPGEF3-201ENST00000389212 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
RAPGEF3-201ENST00000389212 SMIM1B2RUZ4 78 aa8.26□□□□□ -1.09
RAPGEF3-201ENST00000389212 F8WEM9 126 aa8.26□□□□□ -1.09
RAPGEF3-201ENST00000389212 UBE2L6O14933 153 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 COX7A2LO14548 114 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 NDUFA1O15239 70 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 RMI2Q96E14 147 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 CDC42SE2Q9NRR3 84 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 C19orf73Q9NVV2 129 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 LRCOL1A6NCL2 159 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 NCR3O14931 201 aa8.25□□□□□ -1.09
RAPGEF3-201ENST00000389212 DEFB130BP0DP73 79 aa8.24□□□□□ -1.09
RAPGEF3-201ENST00000389212 DEFB130AP0DP74 79 aa8.24□□□□□ -1.09
RAPGEF3-201ENST00000389212 IGLV1-51P01701 117 aa8.24□□□□□ -1.09
RAPGEF3-201ENST00000389212 TOMM7Q9P0U1 55 aa8.24□□□□□ -1.09
RAPGEF3-201ENST00000389212 TRBV10-1A0A0K0K1A3 114 aa8.23□□□□□ -1.09
RAPGEF3-201ENST00000389212 FP248Q71RG6 208 aaPredicted RBP8.23□□□□□ -1.09
RAPGEF3-201ENST00000389212 LINC00308Q8TCZ7 52 aa8.23□□□□□ -1.09
RAPGEF3-201ENST00000389212 IGLV5-39A0A0G2JS06 123 aa8.23□□□□□ -1.09
RAPGEF3-201ENST00000389212 TRBV7-6A0A0J9YX20 115 aa8.23□□□□□ -1.09
RAPGEF3-201ENST00000389212 SLPIP03973 132 aa8.23□□□□□ -1.09
RAPGEF3-201ENST00000389212 RPL28P46779 137 aaKnown RBP8.23□□□□□ -1.09
RAPGEF3-201ENST00000389212 IGLV4-60A0A075B6I1 120 aa8.22□□□□□ -1.09
RAPGEF3-201ENST00000389212 C16orf74Q96GX8 76 aa8.22□□□□□ -1.09
RAPGEF3-201ENST00000389212 PRB2P02812 416 aaPredicted RBP8.22□□□□□ -1.09
RAPGEF3-201ENST00000389212 CSNK1G2-AS1Q8NCQ2 148 aa8.22□□□□□ -1.09
RAPGEF3-201ENST00000389212 SPATA3Q8NHX4 192 aa8.22□□□□□ -1.09
RAPGEF3-201ENST00000389212 A0A087WZ39 114 aa8.21□□□□□ -1.1
RAPGEF3-201ENST00000389212 A0A096LPF7 62 aa8.21□□□□□ -1.1
RAPGEF3-201ENST00000389212 KRTAP10-3P60369 221 aa8.21□□□□□ -1.1
RAPGEF3-201ENST00000389212 HAMPP81172 84 aa8.21□□□□□ -1.1
RAPGEF3-201ENST00000389212 COPS9Q8WXC6 57 aa8.21□□□□□ -1.1
RAPGEF3-201ENST00000389212 C11orf68Q9H3H3 251 aaKnown RBP8.2□□□□□ -1.1
RAPGEF3-201ENST00000389212 Q6JHZ5 121 aa8.2□□□□□ -1.1
RAPGEF3-201ENST00000389212 FAM218AQ96MZ4 157 aa8.2□□□□□ -1.1
RAPGEF3-201ENST00000389212 CCKP06307 115 aa8.19□□□□□ -1.1
RAPGEF3-201ENST00000389212 C9orf129Q5T035 196 aaKnown RBP8.19□□□□□ -1.1
RAPGEF3-201ENST00000389212 CLPSL2Q6UWE3 100 aa8.19□□□□□ -1.1
RAPGEF3-201ENST00000389212 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
RAPGEF3-201ENST00000389212 DEFB4AO15263 64 aa8.19□□□□□ -1.1
RAPGEF3-201ENST00000389212 DAD1P61803 113 aa8.19□□□□□ -1.1
RAPGEF3-201ENST00000389212 C16orf95Q9H693 158 aa8.19□□□□□ -1.1
RAPGEF3-201ENST00000389212 PF4P02776 101 aa8.18□□□□□ -1.1
RAPGEF3-201ENST00000389212 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
RAPGEF3-201ENST00000389212 OTOGQ6ZRI0 2925 aa8.18□□□□□ -1.1
RAPGEF3-201ENST00000389212 TENM1Q9UKZ4 2725 aa8.18□□□□□ -1.1
RAPGEF3-201ENST00000389212 TRBV6-4A0A1B0GX49 114 aa8.17□□□□□ -1.1
RAPGEF3-201ENST00000389212 LECT2O14960 151 aa8.17□□□□□ -1.1
RAPGEF3-201ENST00000389212 LINC01600Q96MT4 127 aa8.17□□□□□ -1.1
RAPGEF3-201ENST00000389212 H7BZZ5 65 aa8.16□□□□□ -1.1
RAPGEF3-201ENST00000389212 ATRQ13535 2644 aa8.16□□□□□ -1.1
RAPGEF3-201ENST00000389212 TRBV6-8A0A0A6YYG3 113 aa8.16□□□□□ -1.1
RAPGEF3-201ENST00000389212 OVOL2Q9BRP0 275 aa8.16□□□□□ -1.1
RAPGEF3-201ENST00000389212 MIR7-3HGQ8N6C7 128 aa8.16□□□□□ -1.1
RAPGEF3-201ENST00000389212 PAX4O43316 350 aa8.15□□□□□ -1.1
RAPGEF3-201ENST00000389212 COX7B2Q8TF08 81 aa8.15□□□□□ -1.1
RAPGEF3-201ENST00000389212 GYPEP15421 78 aa8.15□□□□□ -1.11
RAPGEF3-201ENST00000389212 CMC4P56277 68 aaPredicted RBP8.15□□□□□ -1.11
RAPGEF3-201ENST00000389212 LYPD5Q6UWN5 251 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms