RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 IGHV1-58A0A0C4DH39 117 aa12.07□□□□□ -0.48
PDX1-201ENST00000381033 A0A0J9YXY3 114 aa12.07□□□□□ -0.48
PDX1-201ENST00000381033 RPL13AP40429 203 aaKnown RBP12.07□□□□□ -0.48
PDX1-201ENST00000381033 LINC00242Q5T6M2 205 aa12.07□□□□□ -0.48
PDX1-201ENST00000381033 VSIG2Q96IQ7 327 aa12.07□□□□□ -0.48
PDX1-201ENST00000381033 EIF4EBP3O60516 100 aaPredicted RBP12.07□□□□□ -0.48
PDX1-201ENST00000381033 MAST4O15021 2626 aa12.06□□□□□ -0.48
PDX1-201ENST00000381033 TRBV6-4A0A1B0GX49 114 aa12.06□□□□□ -0.48
PDX1-201ENST00000381033 CFC1BP0CG36 223 aa12.06□□□□□ -0.48
PDX1-201ENST00000381033 CFC1P0CG37 223 aa12.06□□□□□ -0.48
PDX1-201ENST00000381033 NPC2P61916 151 aa12.06□□□□□ -0.48
PDX1-201ENST00000381033 ADAMTSL4-AS1Q5T5F5 129 aa12.06□□□□□ -0.48
PDX1-201ENST00000381033 A0A096LPF7 62 aa12.06□□□□□ -0.48
PDX1-201ENST00000381033 IGKV3OR2-268A0A0C4DH90 116 aa12.06□□□□□ -0.48
PDX1-201ENST00000381033 CDC42SE2Q9NRR3 84 aa12.05□□□□□ -0.48
PDX1-201ENST00000381033 MUSTN1Q8IVN3 82 aa12.05□□□□□ -0.48
PDX1-201ENST00000381033 NDUFA12Q9UI09 145 aa12.05□□□□□ -0.48
PDX1-201ENST00000381033 FAM240AA0A1B0GVK7 77 aa12.04□□□□□ -0.48
PDX1-201ENST00000381033 DAND5Q8N907 189 aa12.04□□□□□ -0.48
PDX1-201ENST00000381033 LITAFQ99732 161 aa12.04□□□□□ -0.48
PDX1-201ENST00000381033 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
PDX1-201ENST00000381033 TMEM243Q9BU79 118 aa12.03□□□□□ -0.48
PDX1-201ENST00000381033 IGLV4-60A0A075B6I1 120 aa12.03□□□□□ -0.48
PDX1-201ENST00000381033 FAM222AQ5U5X8 452 aa12.03□□□□□ -0.48
PDX1-201ENST00000381033 UBE2L6O14933 153 aa12.02□□□□□ -0.48
PDX1-201ENST00000381033 PRSS2P07478 247 aa12.02□□□□□ -0.49
PDX1-201ENST00000381033 TEX49A0A1B0GTD5 131 aa12.01□□□□□ -0.49
PDX1-201ENST00000381033 GYPEP15421 78 aa12□□□□□ -0.49
PDX1-201ENST00000381033 IGLV5-45A0A087WSX0 123 aa12□□□□□ -0.49
PDX1-201ENST00000381033 EPM2AB3EWF7 344 aa12□□□□□ -0.49
PDX1-201ENST00000381033 H7C2G1 150 aa12□□□□□ -0.49
PDX1-201ENST00000381033 ATOX1O00244 68 aa12□□□□□ -0.49
PDX1-201ENST00000381033 TRBV6-8A0A0A6YYG3 113 aa11.99□□□□□ -0.49
PDX1-201ENST00000381033 OXLD1Q5BKU9 147 aa11.99□□□□□ -0.49
PDX1-201ENST00000381033 NOTCH1P46531 2555 aa11.99□□□□□ -0.49
PDX1-201ENST00000381033 LINC00612Q8N6U2 182 aa11.99□□□□□ -0.49
PDX1-201ENST00000381033 CELA1Q9UNI1 258 aa11.98□□□□□ -0.49
PDX1-201ENST00000381033 SMIM1B2RUZ4 78 aa11.98□□□□□ -0.49
PDX1-201ENST00000381033 UBE2WQ96B02 151 aa11.98□□□□□ -0.49
PDX1-201ENST00000381033 CMYA5Q8N3K9 4069 aa11.98□□□□□ -0.49
PDX1-201ENST00000381033 COL6A5A8TX70 2615 aa11.97□□□□□ -0.49
PDX1-201ENST00000381033 IGHV4-28A0A0C4DH34 117 aa11.97□□□□□ -0.49
PDX1-201ENST00000381033 LINC01600Q96MT4 127 aa11.97□□□□□ -0.49
PDX1-201ENST00000381033 UPK3BQ9BT76 320 aa11.97□□□□□ -0.49
PDX1-201ENST00000381033 Q9H8V8 135 aa11.96□□□□□ -0.49
PDX1-201ENST00000381033 TENM3Q9P273 2699 aa11.96□□□□□ -0.49
PDX1-201ENST00000381033 IGHV4-30-4P0DP06 118 aa11.96□□□□□ -0.5
PDX1-201ENST00000381033 WFDC9Q8NEX5 89 aa11.95□□□□□ -0.5
PDX1-201ENST00000381033 IGLV5-39A0A0G2JS06 123 aa11.95□□□□□ -0.5
PDX1-201ENST00000381033 PRO1854Q9UHT4 67 aa11.95□□□□□ -0.5
PDX1-201ENST00000381033 Q8N3U1 123 aa11.94□□□□□ -0.5
PDX1-201ENST00000381033 KRTAP24-1Q3LI83 254 aa11.94□□□□□ -0.5
PDX1-201ENST00000381033 CLPSL2Q6UWE3 100 aa11.94□□□□□ -0.5
PDX1-201ENST00000381033 H3BT86 120 aa11.93□□□□□ -0.5
PDX1-201ENST00000381033 CYSRT1A8MQ03 144 aa11.93□□□□□ -0.5
PDX1-201ENST00000381033 SERP1Q9Y6X1 66 aa11.93□□□□□ -0.5
PDX1-201ENST00000381033 BAHCC1Q9P281 2608 aa11.92□□□□□ -0.5
PDX1-201ENST00000381033 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
PDX1-201ENST00000381033 PRO0255Q9UI72 69 aa11.92□□□□□ -0.5
PDX1-201ENST00000381033 IGHV3-33P01772 117 aa11.92□□□□□ -0.5
PDX1-201ENST00000381033 CXCL5P42830 114 aa11.92□□□□□ -0.5
PDX1-201ENST00000381033 HIST1H4AP62805 103 aaKnown RBP11.92□□□□□ -0.5
PDX1-201ENST00000381033 Q8NAQ8 132 aa11.92□□□□□ -0.5
PDX1-201ENST00000381033 NDUFC2-KCTD14E9PQ53 114 aa11.91□□□□□ -0.5
PDX1-201ENST00000381033 NDUFA1O15239 70 aa11.91□□□□□ -0.5
PDX1-201ENST00000381033 HTN3P15516 51 aa11.91□□□□□ -0.5
PDX1-201ENST00000381033 APOC4P55056 127 aa11.91□□□□□ -0.5
PDX1-201ENST00000381033 PAX4O43316 350 aa11.91□□□□□ -0.5
PDX1-201ENST00000381033 KRTAP10-11P60412 298 aa11.91□□□□□ -0.5
PDX1-201ENST00000381033 SMIM26A0A096LP01 95 aa11.9□□□□□ -0.5
PDX1-201ENST00000381033 MIAQ16674 131 aa11.9□□□□□ -0.5
PDX1-201ENST00000381033 C5orf38Q86SI9 138 aa11.9□□□□□ -0.5
PDX1-201ENST00000381033 TOMM7Q9P0U1 55 aa11.89□□□□□ -0.51
PDX1-201ENST00000381033 DAD1P61803 113 aa11.89□□□□□ -0.51
PDX1-201ENST00000381033 LINC00643Q86TS7 51 aa11.89□□□□□ -0.51
PDX1-201ENST00000381033 LYRM9A8MSI8 78 aa11.88□□□□□ -0.51
PDX1-201ENST00000381033 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
PDX1-201ENST00000381033 SERP2Q8N6R1 65 aa11.88□□□□□ -0.51
PDX1-201ENST00000381033 C11orf45Q8TAV5 145 aa11.88□□□□□ -0.51
PDX1-201ENST00000381033 NBEAL1Q6ZS30 2694 aa11.87□□□□□ -0.51
PDX1-201ENST00000381033 SOSTDC1Q6X4U4 206 aa11.87□□□□□ -0.51
PDX1-201ENST00000381033 A0A0B4J2C4 111 aa11.87□□□□□ -0.51
PDX1-201ENST00000381033 H7C423 109 aa11.87□□□□□ -0.51
PDX1-201ENST00000381033 Q1RN00 199 aa11.87□□□□□ -0.51
PDX1-201ENST00000381033 IGHV3OR16-9A0A0B4J2B5 98 aa11.86□□□□□ -0.51
PDX1-201ENST00000381033 ACYP1P07311 99 aa11.86□□□□□ -0.51
PDX1-201ENST00000381033 DEFB121Q5J5C9 76 aa11.86□□□□□ -0.51
PDX1-201ENST00000381033 TRBV10-2A0A0K0K1G8 114 aa11.86□□□□□ -0.51
PDX1-201ENST00000381033 MRPL55Q7Z7F7 128 aaKnown RBP11.86□□□□□ -0.51
PDX1-201ENST00000381033 H3BS24 57 aa11.85□□□□□ -0.51
PDX1-201ENST00000381033 XCL1P47992 114 aa11.85□□□□□ -0.51
PDX1-201ENST00000381033 LINC00959A0A1B0GUT2 108 aa11.85□□□□□ -0.51
PDX1-201ENST00000381033 C11orf68Q9H3H3 251 aaKnown RBP11.84□□□□□ -0.51
PDX1-201ENST00000381033 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.84□□□□□ -0.51
PDX1-201ENST00000381033 LINC00308Q8TCZ7 52 aa11.84□□□□□ -0.51
PDX1-201ENST00000381033 TRIAP1O43715 76 aa11.83□□□□□ -0.52
PDX1-201ENST00000381033 RPL18AQ02543 176 aaKnown RBP11.83□□□□□ -0.52
PDX1-201ENST00000381033 ATXN8Q156A1 80 aa11.83□□□□□ -0.52
PDX1-201ENST00000381033 MIFP14174 115 aa11.82□□□□□ -0.52
PDX1-201ENST00000381033 IGLV10-54A0A075B6I4 117 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms