RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 CELA1Q9UNI1 258 aa8.64□□□□□ -1.03
GABPB1-203ENST00000380877 M0R2N4 97 aa8.63□□□□□ -1.03
GABPB1-203ENST00000380877 NREPQ16612 68 aa8.63□□□□□ -1.03
GABPB1-203ENST00000380877 NTM-AS1Q6ZSK4 140 aa8.63□□□□□ -1.03
GABPB1-203ENST00000380877 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
GABPB1-203ENST00000380877 TEP1Q99973 2627 aaKnown RBP8.62□□□□□ -1.03
GABPB1-203ENST00000380877 TRAV23DV6A0A075B6W5 121 aa8.62□□□□□ -1.03
GABPB1-203ENST00000380877 PDE6GP18545 87 aa8.62□□□□□ -1.03
GABPB1-203ENST00000380877 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
GABPB1-203ENST00000380877 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
GABPB1-203ENST00000380877 SMIM11BQ8TCY0 68 aa8.62□□□□□ -1.03
GABPB1-203ENST00000380877 X6R8D5 127 aa8.62□□□□□ -1.03
GABPB1-203ENST00000380877 LST1O00453 97 aa8.61□□□□□ -1.03
GABPB1-203ENST00000380877 C9orf116Q5BN46 136 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-203ENST00000380877 WFDC10BQ8IUB3 73 aa8.61□□□□□ -1.03
GABPB1-203ENST00000380877 KRTAP1-3Q8IUG1 177 aa8.61□□□□□ -1.03
GABPB1-203ENST00000380877 CELSR3Q9NYQ7 3312 aa8.61□□□□□ -1.03
GABPB1-203ENST00000380877 IGKV2-28A0A075B6P5 120 aa8.61□□□□□ -1.03
GABPB1-203ENST00000380877 IGKV2D-28P01615 120 aa8.61□□□□□ -1.03
GABPB1-203ENST00000380877 M0R378 163 aa8.6□□□□□ -1.03
GABPB1-203ENST00000380877 FAM19A1Q7Z5A9 133 aa8.6□□□□□ -1.03
GABPB1-203ENST00000380877 DNAH14Q0VDD8 3507 aa8.59□□□□□ -1.03
GABPB1-203ENST00000380877 EGFEM1PQ0D2K5 195 aa8.59□□□□□ -1.03
GABPB1-203ENST00000380877 B9D2Q9BPU9 175 aa8.59□□□□□ -1.03
GABPB1-203ENST00000380877 TNRC18O15417 2968 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-203ENST00000380877 NUPR2A6NF83 97 aa8.58□□□□□ -1.04
GABPB1-203ENST00000380877 Q6ZQY7 126 aa8.58□□□□□ -1.04
GABPB1-203ENST00000380877 LOC107984640A0A0U1RRK4 108 aa8.57□□□□□ -1.04
GABPB1-203ENST00000380877 WFDC9Q8NEX5 89 aa8.57□□□□□ -1.04
GABPB1-203ENST00000380877 FRYQ5TBA9 3013 aa8.57□□□□□ -1.04
GABPB1-203ENST00000380877 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
GABPB1-203ENST00000380877 FRYLO94915 3013 aa8.57□□□□□ -1.04
GABPB1-203ENST00000380877 LINC00643Q86TS7 51 aa8.56□□□□□ -1.04
GABPB1-203ENST00000380877 CHD6Q8TD26 2715 aa8.56□□□□□ -1.04
GABPB1-203ENST00000380877 FAM236AA0A1B0GUQ0 79 aa8.56□□□□□ -1.04
GABPB1-203ENST00000380877 FAM236BA0A1B0GV22 79 aa8.56□□□□□ -1.04
GABPB1-203ENST00000380877 A8MTW9 85 aa8.56□□□□□ -1.04
GABPB1-203ENST00000380877 LY6G6CO95867 125 aa8.56□□□□□ -1.04
GABPB1-203ENST00000380877 IGHV3OR16-9A0A0B4J2B5 98 aa8.55□□□□□ -1.04
GABPB1-203ENST00000380877 ZNF73O43830 326 aaPredicted RBP8.55□□□□□ -1.04
GABPB1-203ENST00000380877 FLNCQ14315 2725 aa8.55□□□□□ -1.04
GABPB1-203ENST00000380877 C6orf223Q8N319 242 aa8.55□□□□□ -1.04
GABPB1-203ENST00000380877 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
GABPB1-203ENST00000380877 USP17L23D6RBM5 183 aa8.54□□□□□ -1.04
GABPB1-203ENST00000380877 PRR3P79522 188 aaKnown RBP8.54□□□□□ -1.04
GABPB1-203ENST00000380877 A0A096LNI7 61 aa8.54□□□□□ -1.04
GABPB1-203ENST00000380877 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
GABPB1-203ENST00000380877 KRTAP1-1Q07627 177 aa8.54□□□□□ -1.04
GABPB1-203ENST00000380877 LINC01561Q8N1V8 128 aa8.53□□□□□ -1.04
GABPB1-203ENST00000380877 Q8NAQ8 132 aa8.52□□□□□ -1.04
GABPB1-203ENST00000380877 NDUFB1O75438 58 aa8.52□□□□□ -1.05
GABPB1-203ENST00000380877 A0A1B0GX51 115 aa8.52□□□□□ -1.05
GABPB1-203ENST00000380877 RPL28P46779 137 aaKnown RBP8.52□□□□□ -1.05
GABPB1-203ENST00000380877 TRBV10-3A0A0K0K1G6 114 aa8.51□□□□□ -1.05
GABPB1-203ENST00000380877 SBSPONQ8IVN8 264 aa8.51□□□□□ -1.05
GABPB1-203ENST00000380877 BOD1L1Q8NFC6 3051 aa8.51□□□□□ -1.05
GABPB1-203ENST00000380877 ATOX1O00244 68 aa8.51□□□□□ -1.05
GABPB1-203ENST00000380877 MT-ATP8P03928 68 aa8.5□□□□□ -1.05
GABPB1-203ENST00000380877 ESRGQ1W209 222 aa8.5□□□□□ -1.05
GABPB1-203ENST00000380877 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
GABPB1-203ENST00000380877 DHRS4-AS1Q9P1J3 65 aa8.5□□□□□ -1.05
GABPB1-203ENST00000380877 IGLV5-45A0A087WSX0 123 aa8.5□□□□□ -1.05
GABPB1-203ENST00000380877 NDUFS5O43920 106 aa8.5□□□□□ -1.05
GABPB1-203ENST00000380877 EYSQ5T1H1 3165 aa8.49□□□□□ -1.05
GABPB1-203ENST00000380877 C2orf48Q96LS8 159 aa8.49□□□□□ -1.05
GABPB1-203ENST00000380877 CSNK1G2-AS1Q8NCQ2 148 aa8.49□□□□□ -1.05
GABPB1-203ENST00000380877 DMXL2Q8TDJ6 3036 aa8.49□□□□□ -1.05
GABPB1-203ENST00000380877 BPY2O14599 106 aa8.49□□□□□ -1.05
GABPB1-203ENST00000380877 CCKP06307 115 aa8.49□□□□□ -1.05
GABPB1-203ENST00000380877 KRTAP10-3P60369 221 aa8.49□□□□□ -1.05
GABPB1-203ENST00000380877 ATMQ13315 3056 aa8.48□□□□□ -1.05
GABPB1-203ENST00000380877 NHLRC4P0CG21 123 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-203ENST00000380877 REV3LO60673 3130 aa8.48□□□□□ -1.05
GABPB1-203ENST00000380877 LINC01556Q5JQF7 62 aa8.48□□□□□ -1.05
GABPB1-203ENST00000380877 C19orf73Q9NVV2 129 aa8.48□□□□□ -1.05
GABPB1-203ENST00000380877 NDUFC2O95298 119 aa8.47□□□□□ -1.05
GABPB1-203ENST00000380877 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
GABPB1-203ENST00000380877 STAB1Q9NY15 2570 aa8.47□□□□□ -1.05
GABPB1-203ENST00000380877 H3BNG1 76 aa8.47□□□□□ -1.05
GABPB1-203ENST00000380877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.47□□□□□ -1.05
GABPB1-203ENST00000380877 Q6ZRU5 148 aa8.47□□□□□ -1.05
GABPB1-203ENST00000380877 TEX15Q9BXT5 2789 aa8.47□□□□□ -1.05
GABPB1-203ENST00000380877 B5MCH6 92 aa8.47□□□□□ -1.05
GABPB1-203ENST00000380877 FREM2Q5SZK8 3169 aa8.47□□□□□ -1.05
GABPB1-203ENST00000380877 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
GABPB1-203ENST00000380877 SDIM1Q6ZPB5 146 aa8.46□□□□□ -1.05
GABPB1-203ENST00000380877 M0QXV9 152 aa8.46□□□□□ -1.06
GABPB1-203ENST00000380877 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-203ENST00000380877 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
GABPB1-203ENST00000380877 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.06
GABPB1-203ENST00000380877 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
GABPB1-203ENST00000380877 F8WDY8 70 aa8.45□□□□□ -1.06
GABPB1-203ENST00000380877 C7orf33Q8WU49 177 aa8.45□□□□□ -1.06
GABPB1-203ENST00000380877 Q8N3U1 123 aa8.45□□□□□ -1.06
GABPB1-203ENST00000380877 UPK3BQ9BT76 320 aa8.45□□□□□ -1.06
GABPB1-203ENST00000380877 Q8N814 137 aa8.44□□□□□ -1.06
GABPB1-203ENST00000380877 COL6A5A8TX70 2615 aa8.44□□□□□ -1.06
GABPB1-203ENST00000380877 A0A087WYN8 130 aa8.44□□□□□ -1.06
GABPB1-203ENST00000380877 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
GABPB1-203ENST00000380877 ADGRG4Q8IZF6 3080 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms